RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	FAM19A4	Q96LR4	140 aa		11.67	□□□□□ -0.54
CIRBP-233	ENST00000591622	PSMG3	Q9BT73	122 aa	Predicted RBP	11.67	□□□□□ -0.54
CIRBP-233	ENST00000591622	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.66	□□□□□ -0.54
CIRBP-233	ENST00000591622	TRAV12-3	A0A0B4J271	114 aa		11.66	□□□□□ -0.54
CIRBP-233	ENST00000591622		G3V3Q6	166 aa		11.66	□□□□□ -0.54
CIRBP-233	ENST00000591622	IGKV2D-40	P01614	121 aa	Predicted RBP	11.66	□□□□□ -0.54
CIRBP-233	ENST00000591622	ATP6V0C	P27449	155 aa		11.66	□□□□□ -0.54
CIRBP-233	ENST00000591622	DAD1	P61803	113 aa		11.66	□□□□□ -0.54
CIRBP-233	ENST00000591622	PQLC2	Q6ZP29	291 aa		11.66	□□□□□ -0.54
CIRBP-233	ENST00000591622	C16orf74	Q96GX8	76 aa		11.66	□□□□□ -0.54
CIRBP-233	ENST00000591622		Q9H3A6	140 aa		11.66	□□□□□ -0.54
CIRBP-233	ENST00000591622	SLC25A5	P05141	298 aa	Known RBP	11.65	□□□□□ -0.54
CIRBP-233	ENST00000591622	CSN1S1	P47710	185 aa		11.65	□□□□□ -0.54
CIRBP-233	ENST00000591622	SERF2	P84101	59 aa		11.65	□□□□□ -0.54
CIRBP-233	ENST00000591622	TMEM78	Q5T7P6	136 aa		11.65	□□□□□ -0.54
CIRBP-233	ENST00000591622	RNASE8	Q8TDE3	154 aa	Known RBP	11.65	□□□□□ -0.54
CIRBP-233	ENST00000591622	TMEM263	Q8WUH6	116 aa	Known RBP	11.65	□□□□□ -0.54
CIRBP-233	ENST00000591622	VGLL1	Q99990	258 aa		11.65	□□□□□ -0.54
CIRBP-233	ENST00000591622	KLLN	B2CW77	178 aa		11.64	□□□□□ -0.55
CIRBP-233	ENST00000591622	NMB	P08949	121 aa		11.64	□□□□□ -0.55
CIRBP-233	ENST00000591622	CRISP2	P16562	243 aa		11.64	□□□□□ -0.55
CIRBP-233	ENST00000591622	RPL7L1	Q6DKI1	246 aa	Known RBP	11.64	□□□□□ -0.55
CIRBP-233	ENST00000591622	CCDC28A	Q8IWP9	274 aa		11.64	□□□□□ -0.55
CIRBP-233	ENST00000591622	NDUFAF3	Q9BU61	184 aa		11.64	□□□□□ -0.55
CIRBP-233	ENST00000591622	SH3BGRL3	Q9H299	93 aa		11.64	□□□□□ -0.55
CIRBP-233	ENST00000591622	ZNF492	Q9P255	531 aa		11.64	□□□□□ -0.55
CIRBP-233	ENST00000591622	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.64	□□□□□ -0.55
CIRBP-233	ENST00000591622	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.63	□□□□□ -0.55
CIRBP-233	ENST00000591622	C7orf71	A4D174	169 aa		11.63	□□□□□ -0.55
CIRBP-233	ENST00000591622	RBAKDN	A6NC62	111 aa		11.63	□□□□□ -0.55
CIRBP-233	ENST00000591622	HMGB3	O15347	200 aa	Known RBP	11.63	□□□□□ -0.55
CIRBP-233	ENST00000591622	MB	P02144	154 aa		11.63	□□□□□ -0.55
CIRBP-233	ENST00000591622	DEFB130B	P0DP73	79 aa		11.63	□□□□□ -0.55
CIRBP-233	ENST00000591622	DEFB130A	P0DP74	79 aa		11.63	□□□□□ -0.55
CIRBP-233	ENST00000591622	HTN3	P15516	51 aa		11.63	□□□□□ -0.55
CIRBP-233	ENST00000591622	CDC34	P49427	236 aa	Predicted RBP	11.63	□□□□□ -0.55
CIRBP-233	ENST00000591622	ZNF138	P52744	262 aa		11.63	□□□□□ -0.55
CIRBP-233	ENST00000591622	CD300C	Q08708	224 aa		11.63	□□□□□ -0.55
CIRBP-233	ENST00000591622	RXFP4	Q8TDU9	374 aa		11.63	□□□□□ -0.55
CIRBP-233	ENST00000591622	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.63	□□□□□ -0.55
CIRBP-233	ENST00000591622	FAM210B	Q96KR6	192 aa		11.63	□□□□□ -0.55
CIRBP-233	ENST00000591622	PYGO2	Q9BRQ0	406 aa		11.63	□□□□□ -0.55
CIRBP-233	ENST00000591622	ZNF324	O75467	553 aa	Predicted RBP	11.62	□□□□□ -0.55
CIRBP-233	ENST00000591622	GPX1	P07203	203 aa		11.62	□□□□□ -0.55
CIRBP-233	ENST00000591622	STAG3L2	P0CL84	134 aa		11.62	□□□□□ -0.55
CIRBP-233	ENST00000591622	STAG3L3	P0CL85	134 aa		11.62	□□□□□ -0.55
CIRBP-233	ENST00000591622	RNASE4	P34096	147 aa	Known RBP	11.62	□□□□□ -0.55
CIRBP-233	ENST00000591622	BTN1A1	Q13410	526 aa		11.62	□□□□□ -0.55
CIRBP-233	ENST00000591622	ZFAND2A	Q8N6M9	145 aa		11.62	□□□□□ -0.55
CIRBP-233	ENST00000591622	RAB24	Q969Q5	203 aa		11.62	□□□□□ -0.55
CIRBP-233	ENST00000591622	OTOR	Q9NRC9	128 aa		11.62	□□□□□ -0.55
CIRBP-233	ENST00000591622	TRBV7-9	A0A0J9YWB2	115 aa		11.61	□□□□□ -0.55
CIRBP-233	ENST00000591622	PGP	A6NDG6	321 aa		11.61	□□□□□ -0.55
CIRBP-233	ENST00000591622	DIRC3	C9JPN6	131 aa		11.61	□□□□□ -0.55
CIRBP-233	ENST00000591622	ARPC5	O15511	151 aa		11.61	□□□□□ -0.55
CIRBP-233	ENST00000591622	ARL14EPL	P0DKL9	152 aa		11.61	□□□□□ -0.55
CIRBP-233	ENST00000591622	FAM74A1	Q5RGS3	127 aa		11.61	□□□□□ -0.55
CIRBP-233	ENST00000591622		Q8TAT8	98 aa		11.61	□□□□□ -0.55
CIRBP-233	ENST00000591622	HYLS1	Q96M11	299 aa		11.61	□□□□□ -0.55
CIRBP-233	ENST00000591622	NOP10	Q9NPE3	64 aa	Known RBP	11.61	□□□□□ -0.55
CIRBP-233	ENST00000591622	CBY3	A6NI87	242 aa		11.6	□□□□□ -0.55
CIRBP-233	ENST00000591622	TAAR5	O14804	337 aa		11.6	□□□□□ -0.55
CIRBP-233	ENST00000591622	CMTM2	Q8TAZ6	248 aa		11.6	□□□□□ -0.55
CIRBP-233	ENST00000591622	LINC00467	Q9BRT7	94 aa		11.6	□□□□□ -0.55
CIRBP-233	ENST00000591622	SNURFL	B1AK76	121 aa		11.59	□□□□□ -0.55
CIRBP-233	ENST00000591622	SMLR1	H3BR10	107 aa		11.59	□□□□□ -0.55
CIRBP-233	ENST00000591622	PRR9	Q5T870	116 aa		11.59	□□□□□ -0.55
CIRBP-233	ENST00000591622	ARL6IP6	Q8N6S5	226 aa		11.59	□□□□□ -0.55
CIRBP-233	ENST00000591622	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.59	□□□□□ -0.55
CIRBP-233	ENST00000591622	ATP5G1	P05496	136 aa		11.58	□□□□□ -0.56
CIRBP-233	ENST00000591622		P0DMU3	169 aa		11.58	□□□□□ -0.56
CIRBP-233	ENST00000591622	FAM231A	P0DMU4	169 aa		11.58	□□□□□ -0.56
CIRBP-233	ENST00000591622	FAM231C	P0DMU5	169 aa		11.58	□□□□□ -0.56
CIRBP-233	ENST00000591622	GCHFR	P30047	84 aa		11.58	□□□□□ -0.56
CIRBP-233	ENST00000591622	ATP5G3	P48201	142 aa		11.58	□□□□□ -0.56
CIRBP-233	ENST00000591622	TMEM88	Q6PEY1	159 aa		11.58	□□□□□ -0.56
CIRBP-233	ENST00000591622	EIF4E3	Q8N5X7	224 aa	Known RBP	11.58	□□□□□ -0.56
CIRBP-233	ENST00000591622	SUN5	Q8TC36	379 aa		11.58	□□□□□ -0.56
CIRBP-233	ENST00000591622	CYTL1	Q9NRR1	136 aa		11.58	□□□□□ -0.56
CIRBP-233	ENST00000591622	LENEP	Q9Y5L5	61 aa		11.58	□□□□□ -0.56
CIRBP-233	ENST00000591622	CXorf1	O96002	111 aa		11.57	□□□□□ -0.56
CIRBP-233	ENST00000591622	ANXA2R	Q3ZCQ2	193 aa		11.57	□□□□□ -0.56
CIRBP-233	ENST00000591622	LINC00612	Q8N6U2	182 aa		11.57	□□□□□ -0.56
CIRBP-233	ENST00000591622	ZNF680	Q8NEM1	530 aa		11.57	□□□□□ -0.56
CIRBP-233	ENST00000591622	TMED6	Q8WW62	240 aa		11.57	□□□□□ -0.56
CIRBP-233	ENST00000591622	RPH3AL	Q9UNE2	315 aa		11.57	□□□□□ -0.56
CIRBP-233	ENST00000591622	DAZ2	Q13117	558 aa	Known RBP	11.56	□□□□□ -0.56
CIRBP-233	ENST00000591622		Q6ZQT7	251 aa		11.56	□□□□□ -0.56
CIRBP-233	ENST00000591622	GOLT1A	Q6ZVE7	132 aa		11.56	□□□□□ -0.56
CIRBP-233	ENST00000591622	SSX7	Q7RTT5	188 aa		11.56	□□□□□ -0.56
CIRBP-233	ENST00000591622	C11orf72	Q8NBR9	251 aa		11.56	□□□□□ -0.56
CIRBP-233	ENST00000591622	ST6GAL2	Q96JF0	529 aa		11.56	□□□□□ -0.56
CIRBP-233	ENST00000591622	TMEM167B	Q9NRX6	74 aa		11.56	□□□□□ -0.56
CIRBP-233	ENST00000591622		F5H768	121 aa		11.55	□□□□□ -0.56
CIRBP-233	ENST00000591622	RGS13	O14921	159 aa		11.55	□□□□□ -0.56
CIRBP-233	ENST00000591622	ZNF345	Q14585	488 aa		11.55	□□□□□ -0.56
CIRBP-233	ENST00000591622	ZNF726P1	Q15940	193 aa		11.55	□□□□□ -0.56
CIRBP-233	ENST00000591622	KCNRG	Q8N5I3	272 aa		11.55	□□□□□ -0.56
CIRBP-233	ENST00000591622	GSN-AS1	Q9NRJ2	163 aa		11.55	□□□□□ -0.56
CIRBP-233	ENST00000591622	VPS13D	Q5THJ4	4388 aa		11.54	□□□□□ -0.56

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