RNA–Protein interactions for RNA: ENST00000590874.5

CAPNS1-211, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-211ENST00000590874 C7orf71A4D174 169 aa17.54■□□□□ 0.4
CAPNS1-211ENST00000590874 M0R3E3 92 aa17.54■□□□□ 0.4
CAPNS1-211ENST00000590874 SSNA1O43805 119 aa17.54■□□□□ 0.4
CAPNS1-211ENST00000590874 SLC25A5P05141 298 aaKnown RBP17.54■□□□□ 0.4
CAPNS1-211ENST00000590874 CAMLGP49069 296 aa17.54■□□□□ 0.4
CAPNS1-211ENST00000590874 ERCC8Q13216 396 aa17.54■□□□□ 0.4
CAPNS1-211ENST00000590874 MIC13Q5XKP0 118 aa17.54■□□□□ 0.4
CAPNS1-211ENST00000590874 AKAP14Q86UN6 197 aa17.54■□□□□ 0.4
CAPNS1-211ENST00000590874 NXPH4O95158 308 aa17.53■□□□□ 0.4
CAPNS1-211ENST00000590874 BTN1A1Q13410 526 aa17.53■□□□□ 0.4
CAPNS1-211ENST00000590874 PGPEP1Q9NXJ5 209 aa17.53■□□□□ 0.4
CAPNS1-211ENST00000590874 KLF12Q9Y4X4 402 aa17.53■□□□□ 0.4
CAPNS1-211ENST00000590874 TNFRSF18Q9Y5U5 241 aa17.53■□□□□ 0.4
CAPNS1-211ENST00000590874 KLLNB2CW77 178 aa17.52■□□□□ 0.4
CAPNS1-211ENST00000590874 ZNF324O75467 553 aaPredicted RBP17.52■□□□□ 0.4
CAPNS1-211ENST00000590874 XGP55808 180 aa17.52■□□□□ 0.4
CAPNS1-211ENST00000590874 CD300CQ08708 224 aa17.52■□□□□ 0.4
CAPNS1-211ENST00000590874 Q6ZRG5 221 aa17.52■□□□□ 0.4
CAPNS1-211ENST00000590874 MITD1Q8WV92 249 aa17.52■□□□□ 0.4
CAPNS1-211ENST00000590874 LINC00467Q9BRT7 94 aa17.52■□□□□ 0.4
CAPNS1-211ENST00000590874 ZNF253O75346 499 aa17.51■□□□□ 0.39
CAPNS1-211ENST00000590874 ANXA2RQ3ZCQ2 193 aa17.51■□□□□ 0.39
CAPNS1-211ENST00000590874 LYPD1Q8N2G4 141 aa17.51■□□□□ 0.39
CAPNS1-211ENST00000590874 C12orf45Q8N5I9 185 aaPredicted RBP17.51■□□□□ 0.39
CAPNS1-211ENST00000590874 MRPL53Q96EL3 112 aaKnown RBP17.51■□□□□ 0.39
CAPNS1-211ENST00000590874 FAM19A4Q96LR4 140 aa17.51■□□□□ 0.39
CAPNS1-211ENST00000590874 FAT1Q14517 4588 aa17.51■□□□□ 0.39
CAPNS1-211ENST00000590874 TRBV19A0A075B6N1 114 aa17.5■□□□□ 0.39
CAPNS1-211ENST00000590874 CCSO14618 274 aa17.5■□□□□ 0.39
CAPNS1-211ENST00000590874 SPINK4O60575 86 aa17.5■□□□□ 0.39
CAPNS1-211ENST00000590874 ERVFC1-1P60608 527 aa17.5■□□□□ 0.39
CAPNS1-211ENST00000590874 EIF4E3Q8N5X7 224 aaKnown RBP17.5■□□□□ 0.39
CAPNS1-211ENST00000590874 OR1L4Q8NGR5 311 aa17.5■□□□□ 0.39
CAPNS1-211ENST00000590874 ICOSQ9Y6W8 199 aa17.5■□□□□ 0.39
CAPNS1-211ENST00000590874 L7N2F9 121 aa17.49■□□□□ 0.39
CAPNS1-211ENST00000590874 PAX4O43316 350 aa17.49■□□□□ 0.39
CAPNS1-211ENST00000590874 CST7O76096 145 aa17.49■□□□□ 0.39
CAPNS1-211ENST00000590874 IGHV3-53P01767 116 aa17.49■□□□□ 0.39
CAPNS1-211ENST00000590874 INAFM2P0DMQ5 153 aa17.49■□□□□ 0.39
CAPNS1-211ENST00000590874 TCL1AP56279 114 aa17.49■□□□□ 0.39
CAPNS1-211ENST00000590874 VAMP2P63027 116 aa17.49■□□□□ 0.39
CAPNS1-211ENST00000590874 RAB31Q13636 194 aa17.49■□□□□ 0.39
CAPNS1-211ENST00000590874 WDR83OSQ9Y284 106 aa17.49■□□□□ 0.39
CAPNS1-211ENST00000590874 NDUFB4O95168 129 aa17.48■□□□□ 0.39
CAPNS1-211ENST00000590874 DNAH10OSP0CZ25 163 aa17.48■□□□□ 0.39
CAPNS1-211ENST00000590874 RNASE4P34096 147 aaKnown RBP17.48■□□□□ 0.39
CAPNS1-211ENST00000590874 CDPF1Q6NVV7 123 aa17.48■□□□□ 0.39
CAPNS1-211ENST00000590874 ST6GAL2Q96JF0 529 aa17.48■□□□□ 0.39
CAPNS1-211ENST00000590874 PFDN5Q99471 154 aa17.48■□□□□ 0.39
CAPNS1-211ENST00000590874 AGPAT4-IT1Q9H0P7 198 aa17.48■□□□□ 0.39
CAPNS1-211ENST00000590874 LSM5Q9Y4Y9 91 aaKnown RBP17.48■□□□□ 0.39
CAPNS1-211ENST00000590874 EREGO14944 169 aa17.47■□□□□ 0.39
CAPNS1-211ENST00000590874 CAV2P51636 162 aa17.47■□□□□ 0.39
CAPNS1-211ENST00000590874 ASB13Q8WXK3 278 aa17.47■□□□□ 0.39
CAPNS1-211ENST00000590874 SLC39A9Q9NUM3 307 aa17.47■□□□□ 0.39
CAPNS1-211ENST00000590874 UQCC1Q9NVA1 299 aa17.47■□□□□ 0.39
CAPNS1-211ENST00000590874 MRPL16Q9NX20 251 aaKnown RBP17.47■□□□□ 0.39
CAPNS1-211ENST00000590874 TP53TG3Q9ULZ0 132 aa17.47■□□□□ 0.39
CAPNS1-211ENST00000590874 LINC00477Q96M19 166 aa17.46■□□□□ 0.39
CAPNS1-211ENST00000590874 C11orf1Q9H5F2 150 aa17.46■□□□□ 0.39
CAPNS1-211ENST00000590874 FAM24AA6NFZ4 105 aa17.45■□□□□ 0.38
CAPNS1-211ENST00000590874 CRISP2P16562 243 aa17.45■□□□□ 0.38
CAPNS1-211ENST00000590874 RPL29P47914 159 aaKnown RBP17.45■□□□□ 0.38
CAPNS1-211ENST00000590874 KRTAP10-1P60331 282 aa17.45■□□□□ 0.38
CAPNS1-211ENST00000590874 VWC2Q2TAL6 325 aa17.45■□□□□ 0.38
CAPNS1-211ENST00000590874 IBA57Q5T440 356 aaKnown RBP17.45■□□□□ 0.38
CAPNS1-211ENST00000590874 PRR9Q5T870 116 aa17.45■□□□□ 0.38
CAPNS1-211ENST00000590874 Q5VSD8 79 aa17.45■□□□□ 0.38
CAPNS1-211ENST00000590874 Q6ZQT7 251 aa17.45■□□□□ 0.38
CAPNS1-211ENST00000590874 EXOC3-AS1Q8N2X6 119 aa17.45■□□□□ 0.38
CAPNS1-211ENST00000590874 TMEM14CQ9P0S9 112 aa17.45■□□□□ 0.38
CAPNS1-211ENST00000590874 UBE2L5PA0A1B0GUS4 154 aa17.44■□□□□ 0.38
CAPNS1-211ENST00000590874 MPDU1O75352 247 aa17.44■□□□□ 0.38
CAPNS1-211ENST00000590874 PYYP10082 97 aa17.44■□□□□ 0.38
CAPNS1-211ENST00000590874 LYPD5Q6UWN5 251 aa17.44■□□□□ 0.38
CAPNS1-211ENST00000590874 TCTE3Q8IZS6 198 aa17.44■□□□□ 0.38
CAPNS1-211ENST00000590874 PRO0255Q9UI72 69 aa17.44■□□□□ 0.38
CAPNS1-211ENST00000590874 PRELID1Q9Y255 219 aa17.44■□□□□ 0.38
CAPNS1-211ENST00000590874 A0A087WTM6 91 aa17.43■□□□□ 0.38
CAPNS1-211ENST00000590874 GPX1P07203 203 aa17.43■□□□□ 0.38
CAPNS1-211ENST00000590874 HIST1H1EP10412 219 aaKnown RBP17.43■□□□□ 0.38
CAPNS1-211ENST00000590874 CRYBA4P53673 196 aa17.43■□□□□ 0.38
CAPNS1-211ENST00000590874 BAXQ07812 192 aa17.43■□□□□ 0.38
CAPNS1-211ENST00000590874 ZFAND2AQ8N6M9 145 aa17.43■□□□□ 0.38
CAPNS1-211ENST00000590874 TIMM9Q9Y5J7 89 aa17.43■□□□□ 0.38
CAPNS1-211ENST00000590874 IGKV2-40A0A087WW87 121 aaPredicted RBP17.42■□□□□ 0.38
CAPNS1-211ENST00000590874 FAM25EA8MYX2 175 aa17.42■□□□□ 0.38
CAPNS1-211ENST00000590874 IGKV2D-40P01614 121 aaPredicted RBP17.42■□□□□ 0.38
CAPNS1-211ENST00000590874 GIPP09681 153 aaPredicted RBP17.42■□□□□ 0.38
CAPNS1-211ENST00000590874 C9orf47Q6ZRZ4 202 aa17.42■□□□□ 0.38
CAPNS1-211ENST00000590874 BLNKQ8WV28 456 aa17.42■□□□□ 0.38
CAPNS1-211ENST00000590874 C8orf49Q96NF6 230 aa17.42■□□□□ 0.38
CAPNS1-211ENST00000590874 VGLL1Q99990 258 aa17.42■□□□□ 0.38
CAPNS1-211ENST00000590874 RGS13O14921 159 aa17.41■□□□□ 0.38
CAPNS1-211ENST00000590874 PDE6HQ13956 83 aa17.41■□□□□ 0.38
CAPNS1-211ENST00000590874 FHL2Q14192 279 aa17.41■□□□□ 0.38
CAPNS1-211ENST00000590874 NFE4Q86UQ8 179 aa17.41■□□□□ 0.38
CAPNS1-211ENST00000590874 HHLA3Q9XRX5 114 aa17.41■□□□□ 0.38
CAPNS1-211ENST00000590874 IGHV1OR15-1A0A075B7D0 117 aa17.39■□□□□ 0.37
CAPNS1-211ENST00000590874 IGSF23A1L1A6 192 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms