RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 TMEM88Q6PEY1 159 aa15.05■□□□□ -0
LRP3-202ENST00000590275 ZFAND2AQ8N6M9 145 aa15.05■□□□□ -0
LRP3-202ENST00000590275 C20orf144Q9BQM9 153 aa15.05■□□□□ -0
LRP3-202ENST00000590275 NOP10Q9NPE3 64 aaKnown RBP15.05■□□□□ -0
LRP3-202ENST00000590275 FAT2Q9NYQ8 4349 aa15.05■□□□□ -0
LRP3-202ENST00000590275 RNF222A6NCQ9 220 aa15.04■□□□□ -0
LRP3-202ENST00000590275 GIPP09681 153 aaPredicted RBP15.04■□□□□ -0
LRP3-202ENST00000590275 RANP62826 216 aaKnown RBP15.04■□□□□ -0
LRP3-202ENST00000590275 TMEM263Q8WUH6 116 aaKnown RBP15.04■□□□□ -0
LRP3-202ENST00000590275 C16orf74Q96GX8 76 aa15.04■□□□□ -0
LRP3-202ENST00000590275 HMGB3O15347 200 aaKnown RBP15.03■□□□□ -0
LRP3-202ENST00000590275 UBE2L3P68036 154 aaKnown RBP15.03■□□□□ -0
LRP3-202ENST00000590275 Q8TAT8 98 aa15.03■□□□□ -0
LRP3-202ENST00000590275 LINC00477Q96M19 166 aa15.03■□□□□ -0
LRP3-202ENST00000590275 Q9H3A6 140 aa15.03■□□□□ -0
LRP3-202ENST00000590275 AAMDCQ9H7C9 122 aa15.03■□□□□ -0
LRP3-202ENST00000590275 DNAH17Q9UFH2 4485 aa15.02■□□□□ -0
LRP3-202ENST00000590275 C7orf71A4D174 169 aa15.02■□□□□ -0
LRP3-202ENST00000590275 CRISP2P16562 243 aa15.02■□□□□ -0
LRP3-202ENST00000590275 M6PRP20645 277 aa15.02■□□□□ -0
LRP3-202ENST00000590275 LINC00612Q8N6U2 182 aa15.02■□□□□ -0
LRP3-202ENST00000590275 HSD17B11Q8NBQ5 300 aa15.02■□□□□ -0
LRP3-202ENST00000590275 TIMM8BQ9Y5J9 83 aaPredicted RBP15.02■□□□□ -0
LRP3-202ENST00000590275 RGS21Q2M5E4 152 aa15.01□□□□□ -0.01
LRP3-202ENST00000590275 ZNF493Q6ZR52 646 aa15.01□□□□□ -0.01
LRP3-202ENST00000590275 SH3BGRL3Q9H299 93 aa15.01□□□□□ -0.01
LRP3-202ENST00000590275 ZNF492Q9P255 531 aa15.01□□□□□ -0.01
LRP3-202ENST00000590275 HECTD4Q9Y4D8 3996 aa15.01□□□□□ -0.01
LRP3-202ENST00000590275 SLC25A5P05141 298 aaKnown RBP15□□□□□ -0.01
LRP3-202ENST00000590275 ATP6V0CP27449 155 aa15□□□□□ -0.01
LRP3-202ENST00000590275 RNASE4P34096 147 aaKnown RBP15□□□□□ -0.01
LRP3-202ENST00000590275 ACOT6Q3I5F7 207 aaPredicted RBP15□□□□□ -0.01
LRP3-202ENST00000590275 KHDC3LQ587J8 217 aa15□□□□□ -0.01
LRP3-202ENST00000590275 FAM210BQ96KR6 192 aa15□□□□□ -0.01
LRP3-202ENST00000590275 POM121L12Q8N7R1 296 aa14.99□□□□□ -0.01
LRP3-202ENST00000590275 C11orf72Q8NBR9 251 aa14.99□□□□□ -0.01
LRP3-202ENST00000590275 OR10G4Q8NGN3 311 aa14.99□□□□□ -0.01
LRP3-202ENST00000590275 OR10G9Q8NGN4 311 aa14.99□□□□□ -0.01
LRP3-202ENST00000590275 OR10G7Q8NGN6 311 aa14.99□□□□□ -0.01
LRP3-202ENST00000590275 TP53TG3Q9ULZ0 132 aa14.99□□□□□ -0.01
LRP3-202ENST00000590275 TNFSF18Q9UNG2 199 aa14.99□□□□□ -0.01
LRP3-202ENST00000590275 CBY3A6NI87 242 aa14.98□□□□□ -0.01
LRP3-202ENST00000590275 RPL7L1Q6DKI1 246 aaKnown RBP14.98□□□□□ -0.01
LRP3-202ENST00000590275 SSX7Q7RTT5 188 aa14.98□□□□□ -0.01
LRP3-202ENST00000590275 LYPD1Q8N2G4 141 aa14.98□□□□□ -0.01
LRP3-202ENST00000590275 OR2G3Q8NGZ4 309 aa14.98□□□□□ -0.01
LRP3-202ENST00000590275 PYGO2Q9BRQ0 406 aa14.98□□□□□ -0.01
LRP3-202ENST00000590275 DIRC3C9JPN6 131 aa14.97□□□□□ -0.01
LRP3-202ENST00000590275 P0DMU3 169 aa14.97□□□□□ -0.01
LRP3-202ENST00000590275 FAM231AP0DMU4 169 aa14.97□□□□□ -0.01
LRP3-202ENST00000590275 FAM231CP0DMU5 169 aa14.97□□□□□ -0.01
LRP3-202ENST00000590275 ZNF138P52744 262 aa14.97□□□□□ -0.01
LRP3-202ENST00000590275 TAS2R45P59539 299 aa14.97□□□□□ -0.01
LRP3-202ENST00000590275 TMEM78Q5T7P6 136 aa14.97□□□□□ -0.01
LRP3-202ENST00000590275 OR2T35Q8NGX2 323 aa14.97□□□□□ -0.01
LRP3-202ENST00000590275 GSN-AS1Q9NRJ2 163 aa14.97□□□□□ -0.01
LRP3-202ENST00000590275 FXYD6-FXYD2A0A087WZ82 144 aa14.96□□□□□ -0.01
LRP3-202ENST00000590275 GAGE12BA1L429 117 aa14.96□□□□□ -0.01
LRP3-202ENST00000590275 F5H768 121 aa14.96□□□□□ -0.01
LRP3-202ENST00000590275 SMLR1H3BR10 107 aa14.96□□□□□ -0.01
LRP3-202ENST00000590275 GAGE7O76087 117 aa14.96□□□□□ -0.01
LRP3-202ENST00000590275 GAGE12FP0CL80 117 aa14.96□□□□□ -0.01
LRP3-202ENST00000590275 GAGE12GP0CL81 117 aa14.96□□□□□ -0.01
LRP3-202ENST00000590275 GAGE12IP0CL82 117 aa14.96□□□□□ -0.01
LRP3-202ENST00000590275 ZNF266Q14584 549 aa14.96□□□□□ -0.01
LRP3-202ENST00000590275 CCDC28AQ8IWP9 274 aa14.96□□□□□ -0.01
LRP3-202ENST00000590275 HYLS1Q96M11 299 aa14.96□□□□□ -0.01
LRP3-202ENST00000590275 LINC00467Q9BRT7 94 aa14.96□□□□□ -0.01
LRP3-202ENST00000590275 PGPA6NDG6 321 aa14.95□□□□□ -0.02
LRP3-202ENST00000590275 ATP5G1P05496 136 aa14.95□□□□□ -0.02
LRP3-202ENST00000590275 GPX1P07203 203 aa14.95□□□□□ -0.02
LRP3-202ENST00000590275 NMBP08949 121 aa14.95□□□□□ -0.02
LRP3-202ENST00000590275 ARL14EPLP0DKL9 152 aa14.95□□□□□ -0.02
LRP3-202ENST00000590275 HOXA5P20719 270 aa14.95□□□□□ -0.02
LRP3-202ENST00000590275 ATP5G3P48201 142 aa14.95□□□□□ -0.02
LRP3-202ENST00000590275 Q6ZTI0 123 aa14.95□□□□□ -0.02
LRP3-202ENST00000590275 ASB13Q8WXK3 278 aa14.95□□□□□ -0.02
LRP3-202ENST00000590275 PSMG3Q9BT73 122 aaPredicted RBP14.95□□□□□ -0.02
LRP3-202ENST00000590275 KLF12Q9Y4X4 402 aa14.95□□□□□ -0.02
LRP3-202ENST00000590275 A0A1W2PPV4 95 aa14.94□□□□□ -0.02
LRP3-202ENST00000590275 RBAKDNA6NC62 111 aa14.94□□□□□ -0.02
LRP3-202ENST00000590275 STAG3L2P0CL84 134 aa14.94□□□□□ -0.02
LRP3-202ENST00000590275 STAG3L3P0CL85 134 aa14.94□□□□□ -0.02
LRP3-202ENST00000590275 CDC34P49427 236 aaPredicted RBP14.94□□□□□ -0.02
LRP3-202ENST00000590275 GNG5P63218 68 aa14.94□□□□□ -0.02
LRP3-202ENST00000590275 PQLC2Q6ZP29 291 aa14.94□□□□□ -0.02
LRP3-202ENST00000590275 RAB24Q969Q5 203 aa14.94□□□□□ -0.02
LRP3-202ENST00000590275 TVP23CQ96ET8 276 aa14.94□□□□□ -0.02
LRP3-202ENST00000590275 OTORQ9NRC9 128 aa14.94□□□□□ -0.02
LRP3-202ENST00000590275 DAZ2Q13117 558 aaKnown RBP14.93□□□□□ -0.02
LRP3-202ENST00000590275 ZNF726P1Q15940 193 aa14.93□□□□□ -0.02
LRP3-202ENST00000590275 ANXA2RQ3ZCQ2 193 aa14.93□□□□□ -0.02
LRP3-202ENST00000590275 SUN5Q8TC36 379 aa14.93□□□□□ -0.02
LRP3-202ENST00000590275 TRAV8-1A0A0A6YYK1 113 aa14.92□□□□□ -0.02
LRP3-202ENST00000590275 M0R2N4 97 aa14.92□□□□□ -0.02
LRP3-202ENST00000590275 CSN1S1P47710 185 aa14.92□□□□□ -0.02
LRP3-202ENST00000590275 EIF4E3Q8N5X7 224 aaKnown RBP14.92□□□□□ -0.02
LRP3-202ENST00000590275 TMPRSS5Q9H3S3 457 aa14.92□□□□□ -0.02
LRP3-202ENST00000590275 CYTL1Q9NRR1 136 aa14.92□□□□□ -0.02
LRP3-202ENST00000590275 RPH3ALQ9UNE2 315 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms