RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, human

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-223	ENST00000590215	FAM74A1	Q5RGS3	127 aa		13.53	□□□□□ -0.24
MBD1-223	ENST00000590215	SLC51B	Q86UW2	128 aa		13.53	□□□□□ -0.24
MBD1-223	ENST00000590215	TMED6	Q8WW62	240 aa		13.53	□□□□□ -0.24
MBD1-223	ENST00000590215	VGLL1	Q99990	258 aa		13.53	□□□□□ -0.24
MBD1-223	ENST00000590215	TRAV12-2	A0A075B6T6	113 aa		13.52	□□□□□ -0.25
MBD1-223	ENST00000590215	MAP1LC3B2	A6NCE7	125 aa		13.52	□□□□□ -0.25
MBD1-223	ENST00000590215	LEP	P41159	167 aa		13.52	□□□□□ -0.25
MBD1-223	ENST00000590215	IL17D	Q8TAD2	202 aa		13.52	□□□□□ -0.25
MBD1-223	ENST00000590215	MBD3L1	Q8WWY6	194 aa		13.52	□□□□□ -0.25
MBD1-223	ENST00000590215	C20orf144	Q9BQM9	153 aa		13.52	□□□□□ -0.25
MBD1-223	ENST00000590215	MAP1LC3B	Q9GZQ8	125 aa		13.52	□□□□□ -0.25
MBD1-223	ENST00000590215	ZNF492	Q9P255	531 aa		13.52	□□□□□ -0.25
MBD1-223	ENST00000590215	TRBV7-9	A0A0J9YWB2	115 aa		13.51	□□□□□ -0.25
MBD1-223	ENST00000590215		A0A1W2PRE2	83 aa		13.51	□□□□□ -0.25
MBD1-223	ENST00000590215	NMB	P08949	121 aa		13.51	□□□□□ -0.25
MBD1-223	ENST00000590215	CRISP2	P16562	243 aa		13.51	□□□□□ -0.25
MBD1-223	ENST00000590215	KIR3DS1	Q14943	382 aa		13.51	□□□□□ -0.25
MBD1-223	ENST00000590215	TMEM78	Q5T7P6	136 aa		13.51	□□□□□ -0.25
MBD1-223	ENST00000590215	EIF5AL1	Q6IS14	154 aa	Known RBP	13.51	□□□□□ -0.25
MBD1-223	ENST00000590215	TMEM256	Q8N2U0	113 aa		13.51	□□□□□ -0.25
MBD1-223	ENST00000590215	CMTM2	Q8TAZ6	248 aa		13.51	□□□□□ -0.25
MBD1-223	ENST00000590215	TMPRSS5	Q9H3S3	457 aa		13.51	□□□□□ -0.25
MBD1-223	ENST00000590215	IGHV3OR16-12	A0A075B7B8	117 aa		13.5	□□□□□ -0.25
MBD1-223	ENST00000590215	KLLN	B2CW77	178 aa		13.5	□□□□□ -0.25
MBD1-223	ENST00000590215	DEFB4A	O15263	64 aa		13.5	□□□□□ -0.25
MBD1-223	ENST00000590215	FGF8	P55075	233 aa	Predicted RBP	13.5	□□□□□ -0.25
MBD1-223	ENST00000590215	C5orf17	Q8NAS9	161 aa		13.5	□□□□□ -0.25
MBD1-223	ENST00000590215	GGTLC3	B5MD39	225 aa		13.49	□□□□□ -0.25
MBD1-223	ENST00000590215	RAB5C	P51148	216 aa		13.49	□□□□□ -0.25
MBD1-223	ENST00000590215	ZNF138	P52744	262 aa		13.49	□□□□□ -0.25
MBD1-223	ENST00000590215	GFI1B	Q5VTD9	330 aa		13.49	□□□□□ -0.25
MBD1-223	ENST00000590215	FAM213B	Q8TBF2	198 aa		13.49	□□□□□ -0.25
MBD1-223	ENST00000590215	LENEP	Q9Y5L5	61 aa		13.49	□□□□□ -0.25
MBD1-223	ENST00000590215	SERTM2	A0A1B0GWG4	89 aa		13.48	□□□□□ -0.25
MBD1-223	ENST00000590215	TMEM189	A5PLL7	270 aa		13.48	□□□□□ -0.25
MBD1-223	ENST00000590215	HBE1	P02100	147 aa		13.48	□□□□□ -0.25
MBD1-223	ENST00000590215	SUMO1	P63165	101 aa	Known RBP	13.48	□□□□□ -0.25
MBD1-223	ENST00000590215	IQCF2	Q8IXL9	164 aa		13.48	□□□□□ -0.25
MBD1-223	ENST00000590215	ZFAND2A	Q8N6M9	145 aa		13.48	□□□□□ -0.25
MBD1-223	ENST00000590215	TMEM208	Q9BTX3	173 aa		13.48	□□□□□ -0.25
MBD1-223	ENST00000590215	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.48	□□□□□ -0.25
MBD1-223	ENST00000590215	CSMD3	Q7Z407	3707 aa		13.48	□□□□□ -0.25
MBD1-223	ENST00000590215		H7BYZ3	331 aa		13.47	□□□□□ -0.25
MBD1-223	ENST00000590215	SULT1A2	P50226	295 aa		13.47	□□□□□ -0.25
MBD1-223	ENST00000590215	TAS2R60	P59551	318 aa		13.47	□□□□□ -0.25
MBD1-223	ENST00000590215	RRN3P1	Q2M238	152 aa		13.47	□□□□□ -0.25
MBD1-223	ENST00000590215	CASC10	Q5T4H9	136 aa		13.47	□□□□□ -0.25
MBD1-223	ENST00000590215	SFT2D1	Q8WV19	159 aa		13.47	□□□□□ -0.25
MBD1-223	ENST00000590215	NKX6-2	Q9C056	277 aa	Predicted RBP	13.47	□□□□□ -0.25
MBD1-223	ENST00000590215	ARL2-SNX15	V9GYD0	113 aa		13.47	□□□□□ -0.25
MBD1-223	ENST00000590215	FAM74A7	A6NL05	159 aa		13.46	□□□□□ -0.25
MBD1-223	ENST00000590215	TCRA	P04437	139 aa		13.46	□□□□□ -0.25
MBD1-223	ENST00000590215	H2AFB1	P0C5Y9	115 aa		13.46	□□□□□ -0.25
MBD1-223	ENST00000590215	GNG5	P63218	68 aa		13.46	□□□□□ -0.25
MBD1-223	ENST00000590215	GOLT1A	Q6ZVE7	132 aa		13.46	□□□□□ -0.25
MBD1-223	ENST00000590215		Q8TAT8	98 aa		13.46	□□□□□ -0.25
MBD1-223	ENST00000590215	LINC01587	Q99440	93 aa		13.46	□□□□□ -0.25
MBD1-223	ENST00000590215	EPDR1	Q9UM22	224 aa		13.46	□□□□□ -0.25
MBD1-223	ENST00000590215	TRAV1-1	A0A0B4J248	108 aa		13.45	□□□□□ -0.26
MBD1-223	ENST00000590215	LOC102723971	A0A1B0GUV8	181 aa		13.45	□□□□□ -0.26
MBD1-223	ENST00000590215	C7orf71	A4D174	169 aa		13.45	□□□□□ -0.26
MBD1-223	ENST00000590215	ZNF324	O75467	553 aa	Predicted RBP	13.45	□□□□□ -0.26
MBD1-223	ENST00000590215	C11orf45	Q8TAV5	145 aa		13.45	□□□□□ -0.26
MBD1-223	ENST00000590215	STARD9	Q9P2P6	4700 aa		13.45	□□□□□ -0.26
MBD1-223	ENST00000590215	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.44	□□□□□ -0.26
MBD1-223	ENST00000590215	NKX2-5	P52952	324 aa	Predicted RBP	13.44	□□□□□ -0.26
MBD1-223	ENST00000590215	UBE2G2	P60604	165 aa		13.44	□□□□□ -0.26
MBD1-223	ENST00000590215	PRR9	Q5T870	116 aa		13.44	□□□□□ -0.26
MBD1-223	ENST00000590215	CCDC28A	Q8IWP9	274 aa		13.44	□□□□□ -0.26
MBD1-223	ENST00000590215	RPH3AL	Q9UNE2	315 aa		13.44	□□□□□ -0.26
MBD1-223	ENST00000590215	TRAV12-3	A0A0B4J271	114 aa		13.43	□□□□□ -0.26
MBD1-223	ENST00000590215		J3KRW8	73 aa		13.43	□□□□□ -0.26
MBD1-223	ENST00000590215	PRM2	P04554	102 aa		13.43	□□□□□ -0.26
MBD1-223	ENST00000590215	GPX1	P07203	203 aa		13.43	□□□□□ -0.26
MBD1-223	ENST00000590215	BTN1A1	Q13410	526 aa		13.43	□□□□□ -0.26
MBD1-223	ENST00000590215	ZFAND6	Q6FIF0	208 aa		13.43	□□□□□ -0.26
MBD1-223	ENST00000590215	PYGO2	Q9BRQ0	406 aa		13.43	□□□□□ -0.26
MBD1-223	ENST00000590215	LINC00467	Q9BRT7	94 aa		13.43	□□□□□ -0.26
MBD1-223	ENST00000590215	NIPSNAP3B	Q9BS92	247 aa		13.43	□□□□□ -0.26
MBD1-223	ENST00000590215	ATG101	Q9BSB4	218 aa		13.43	□□□□□ -0.26
MBD1-223	ENST00000590215	TRAV8-1	A0A0A6YYK1	113 aa		13.42	□□□□□ -0.26
MBD1-223	ENST00000590215	PLAC8L1	A1L4L8	177 aa		13.42	□□□□□ -0.26
MBD1-223	ENST00000590215	FBLL1	A6NHQ2	334 aa	Known RBP	13.42	□□□□□ -0.26
MBD1-223	ENST00000590215	IGLV2-11	P01706	119 aa		13.42	□□□□□ -0.26
MBD1-223	ENST00000590215	AZU1	P20160	251 aa		13.42	□□□□□ -0.26
MBD1-223	ENST00000590215	RNASE4	P34096	147 aa	Known RBP	13.42	□□□□□ -0.26
MBD1-223	ENST00000590215	NANOS2	P60321	138 aa	Known RBP	13.42	□□□□□ -0.26
MBD1-223	ENST00000590215	ZNF493	Q6ZR52	646 aa		13.42	□□□□□ -0.26
MBD1-223	ENST00000590215	CYB561D1	Q8N8Q1	229 aa		13.42	□□□□□ -0.26
MBD1-223	ENST00000590215	TCEAL7	Q9BRU2	100 aa		13.42	□□□□□ -0.26
MBD1-223	ENST00000590215	CELA1	Q9UNI1	258 aa		13.42	□□□□□ -0.26
MBD1-223	ENST00000590215	CXorf65	A6NEN9	183 aa		13.41	□□□□□ -0.26
MBD1-223	ENST00000590215		K7EQM0	130 aa		13.41	□□□□□ -0.26
MBD1-223	ENST00000590215	PPT1	P50897	306 aa		13.41	□□□□□ -0.26
MBD1-223	ENST00000590215	HIST1H2BA	Q96A08	127 aa		13.41	□□□□□ -0.26
MBD1-223	ENST00000590215	TVP23C	Q96ET8	276 aa		13.41	□□□□□ -0.26
MBD1-223	ENST00000590215	DKK2	Q9UBU2	259 aa		13.41	□□□□□ -0.26
MBD1-223	ENST00000590215	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.4	□□□□□ -0.26
MBD1-223	ENST00000590215	TEX48	A0A1B0GUV7	120 aa		13.4	□□□□□ -0.26
MBD1-223	ENST00000590215	IFNA7	P01567	189 aa		13.4	□□□□□ -0.26

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