RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 ODF3Q96PU9 254 aa8.81□□□□□ -1
RFX1-207ENST00000589937 VGLL1Q99990 258 aa8.81□□□□□ -1
RFX1-207ENST00000589937 C20orf144Q9BQM9 153 aa8.81□□□□□ -1
RFX1-207ENST00000589937 AGPAT4-IT1Q9H0P7 198 aa8.81□□□□□ -1
RFX1-207ENST00000589937 GSN-AS1Q9NRJ2 163 aa8.81□□□□□ -1
RFX1-207ENST00000589937 TMEM14CQ9P0S9 112 aa8.81□□□□□ -1
RFX1-207ENST00000589937 RYR1P21817 5038 aa8.81□□□□□ -1
RFX1-207ENST00000589937 HSPG2P98160 4391 aa8.8□□□□□ -1
RFX1-207ENST00000589937 C7orf71A4D174 169 aa8.8□□□□□ -1
RFX1-207ENST00000589937 RLN2P04090 185 aa8.8□□□□□ -1
RFX1-207ENST00000589937 OR10J4P0C629 311 aa8.8□□□□□ -1
RFX1-207ENST00000589937 HIST1H1EP10412 219 aaKnown RBP8.8□□□□□ -1
RFX1-207ENST00000589937 SSX7Q7RTT5 188 aa8.8□□□□□ -1
RFX1-207ENST00000589937 C11orf72Q8NBR9 251 aa8.8□□□□□ -1
RFX1-207ENST00000589937 S100ZQ8WXG8 99 aa8.8□□□□□ -1
RFX1-207ENST00000589937 MRPL53Q96EL3 112 aaKnown RBP8.8□□□□□ -1
RFX1-207ENST00000589937 TP53TG3Q9ULZ0 132 aa8.8□□□□□ -1
RFX1-207ENST00000589937 TIMM9Q9Y5J7 89 aa8.8□□□□□ -1
RFX1-207ENST00000589937 SNURFLB1AK76 121 aa8.79□□□□□ -1
RFX1-207ENST00000589937 KLLNB2CW77 178 aa8.79□□□□□ -1
RFX1-207ENST00000589937 RNASE4P34096 147 aaKnown RBP8.79□□□□□ -1
RFX1-207ENST00000589937 ATP6V1FQ16864 119 aa8.79□□□□□ -1
RFX1-207ENST00000589937 CCDC28AQ8IWP9 274 aa8.79□□□□□ -1
RFX1-207ENST00000589937 ZFAND2AQ8N6M9 145 aa8.79□□□□□ -1
RFX1-207ENST00000589937 FXYD5Q96DB9 178 aa8.79□□□□□ -1
RFX1-207ENST00000589937 GNPNAT1Q96EK6 184 aaPredicted RBP8.79□□□□□ -1
RFX1-207ENST00000589937 ZNF503Q96F45 646 aa8.79□□□□□ -1
RFX1-207ENST00000589937 E5RGE8 158 aa8.78□□□□□ -1
RFX1-207ENST00000589937 MPDU1O75352 247 aa8.78□□□□□ -1
RFX1-207ENST00000589937 ZNF324O75467 553 aaPredicted RBP8.78□□□□□ -1
RFX1-207ENST00000589937 SLC25A5P05141 298 aaKnown RBP8.78□□□□□ -1
RFX1-207ENST00000589937 MED14OSP0DP75 135 aa8.78□□□□□ -1
RFX1-207ENST00000589937 M6PRP20645 277 aa8.78□□□□□ -1
RFX1-207ENST00000589937 CCL18P55774 89 aa8.78□□□□□ -1
RFX1-207ENST00000589937 FAM3BP58499 235 aaPredicted RBP8.78□□□□□ -1
RFX1-207ENST00000589937 PDE6HQ13956 83 aa8.78□□□□□ -1
RFX1-207ENST00000589937 PYGO2Q9BRQ0 406 aa8.78□□□□□ -1
RFX1-207ENST00000589937 NMES1Q9C002 83 aa8.78□□□□□ -1
RFX1-207ENST00000589937 WDR61Q9GZS3 305 aaKnown RBP8.78□□□□□ -1
RFX1-207ENST00000589937 KLF12Q9Y4X4 402 aa8.78□□□□□ -1
RFX1-207ENST00000589937 ABCA13Q86UQ4 5058 aa8.78□□□□□ -1
RFX1-207ENST00000589937 TRGV1A0A0A0MS02 117 aa8.77□□□□□ -1.01
RFX1-207ENST00000589937 A6NHS1 94 aa8.77□□□□□ -1.01
RFX1-207ENST00000589937 INMT-MINDY4F8WBC2 141 aa8.77□□□□□ -1.01
RFX1-207ENST00000589937 SOHLH1Q5JUK2 328 aa8.77□□□□□ -1.01
RFX1-207ENST00000589937 LINC00299Q6ZSB3 139 aa8.77□□□□□ -1.01
RFX1-207ENST00000589937 C6orf223Q8N319 242 aa8.77□□□□□ -1.01
RFX1-207ENST00000589937 RXFP4Q8TDU9 374 aa8.77□□□□□ -1.01
RFX1-207ENST00000589937 PPP1R1CQ8WVI7 109 aa8.77□□□□□ -1.01
RFX1-207ENST00000589937 VSIG2Q96IQ7 327 aa8.77□□□□□ -1.01
RFX1-207ENST00000589937 KRTAP4-5Q9BYR2 181 aa8.77□□□□□ -1.01
RFX1-207ENST00000589937 SMIM3Q9BZL3 60 aa8.77□□□□□ -1.01
RFX1-207ENST00000589937 MRPL16Q9NX20 251 aaKnown RBP8.77□□□□□ -1.01
RFX1-207ENST00000589937 PTTG2Q9NZH5 202 aa8.77□□□□□ -1.01
RFX1-207ENST00000589937 LRP1BQ9NZR2 4599 aa8.76□□□□□ -1.01
RFX1-207ENST00000589937 OR7C2O60412 319 aa8.76□□□□□ -1.01
RFX1-207ENST00000589937 IGHV3-53P01767 116 aa8.76□□□□□ -1.01
RFX1-207ENST00000589937 NBEAP1P0C6P0 100 aa8.76□□□□□ -1.01
RFX1-207ENST00000589937 CRISP2P16562 243 aa8.76□□□□□ -1.01
RFX1-207ENST00000589937 DAZ2Q13117 558 aaKnown RBP8.76□□□□□ -1.01
RFX1-207ENST00000589937 ESRGQ1W209 222 aa8.76□□□□□ -1.01
RFX1-207ENST00000589937 C9orf47Q6ZRZ4 202 aa8.76□□□□□ -1.01
RFX1-207ENST00000589937 ATP5SQ99766 215 aa8.76□□□□□ -1.01
RFX1-207ENST00000589937 PAXXQ9BUH6 204 aa8.76□□□□□ -1.01
RFX1-207ENST00000589937 SLC25A31Q9H0C2 315 aa8.76□□□□□ -1.01
RFX1-207ENST00000589937 OR51M1Q9H341 326 aa8.76□□□□□ -1.01
RFX1-207ENST00000589937 AAMDCQ9H7C9 122 aa8.76□□□□□ -1.01
RFX1-207ENST00000589937 FUT9Q9Y231 359 aa8.76□□□□□ -1.01
RFX1-207ENST00000589937 PRELID1Q9Y255 219 aa8.76□□□□□ -1.01
RFX1-207ENST00000589937 TRGV2A0A075B6R0 118 aa8.75□□□□□ -1.01
RFX1-207ENST00000589937 GPX1P07203 203 aa8.75□□□□□ -1.01
RFX1-207ENST00000589937 FFAR4Q5NUL3 377 aa8.75□□□□□ -1.01
RFX1-207ENST00000589937 EIF4E3Q8N5X7 224 aaKnown RBP8.75□□□□□ -1.01
RFX1-207ENST00000589937 LINC00477Q96M19 166 aa8.75□□□□□ -1.01
RFX1-207ENST00000589937 MARVELD1Q9BSK0 173 aa8.75□□□□□ -1.01
RFX1-207ENST00000589937 MRPL32Q9BYC8 188 aaKnown RBP8.75□□□□□ -1.01
RFX1-207ENST00000589937 WFDC1Q9HC57 220 aa8.75□□□□□ -1.01
RFX1-207ENST00000589937 MBD2Q9UBB5 411 aa8.75□□□□□ -1.01
RFX1-207ENST00000589937 HSPB11Q9Y547 144 aa8.75□□□□□ -1.01
RFX1-207ENST00000589937 A0A096LPF7 62 aa8.74□□□□□ -1.01
RFX1-207ENST00000589937 SSNA1O43805 119 aa8.74□□□□□ -1.01
RFX1-207ENST00000589937 PRAF2O60831 178 aa8.74□□□□□ -1.01
RFX1-207ENST00000589937 MPC2O95563 127 aa8.74□□□□□ -1.01
RFX1-207ENST00000589937 TCL1AP56279 114 aa8.74□□□□□ -1.01
RFX1-207ENST00000589937 UBE2L3P68036 154 aaKnown RBP8.74□□□□□ -1.01
RFX1-207ENST00000589937 MUC21Q5SSG8 566 aa8.74□□□□□ -1.01
RFX1-207ENST00000589937 TMEM78Q5T7P6 136 aa8.74□□□□□ -1.01
RFX1-207ENST00000589937 ZNF680Q8NEM1 530 aa8.74□□□□□ -1.01
RFX1-207ENST00000589937 Q9H3A6 140 aa8.74□□□□□ -1.01
RFX1-207ENST00000589937 Q9H8V8 135 aa8.74□□□□□ -1.01
RFX1-207ENST00000589937 ZNF492Q9P255 531 aa8.74□□□□□ -1.01
RFX1-207ENST00000589937 C16orf90A8MZG2 172 aa8.73□□□□□ -1.01
RFX1-207ENST00000589937 RGS13O14921 159 aa8.73□□□□□ -1.01
RFX1-207ENST00000589937 SPINK4O60575 86 aa8.73□□□□□ -1.01
RFX1-207ENST00000589937 RANP62826 216 aaKnown RBP8.73□□□□□ -1.01
RFX1-207ENST00000589937 ANXA2RQ3ZCQ2 193 aa8.73□□□□□ -1.01
RFX1-207ENST00000589937 LINC00467Q9BRT7 94 aa8.73□□□□□ -1.01
RFX1-207ENST00000589937 RPH3ALQ9UNE2 315 aa8.73□□□□□ -1.01
RFX1-207ENST00000589937 MRPS16Q9Y3D3 137 aaKnown RBP8.73□□□□□ -1.01
RFX1-207ENST00000589937 IGHV1OR15-1A0A075B7D0 117 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms