RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 RAB4AP20338 218 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 NTF3P20783 257 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 RNASEKQ6P5S7 137 aaKnown RBP11.72□□□□□ -0.53
MBD1-217ENST00000588937 VPS13CQ709C8 3753 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 REC114Q7Z4M0 266 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 ABCA12Q86UK0 2595 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 NIT1Q86X76 327 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 Q8TAT8 98 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 GLMPQ8WWB7 406 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 TPPP3Q9BW30 176 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 IGHV3OR16-13A0A075B7E8 117 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 IGHV3-49A0A0A0MS15 119 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 IGHV3-74A0A0B4J1X5 117 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 M0R2Z0 102 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 ZNF493Q6ZR52 646 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 C9orf139Q6ZV77 190 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 RNF182Q8N6D2 247 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 CSMD1Q96PZ7 3565 aa11.72□□□□□ -0.53
MBD1-217ENST00000588937 TRAV8-2A0A0B4J237 113 aa11.71□□□□□ -0.54
MBD1-217ENST00000588937 CD33P20138 364 aa11.71□□□□□ -0.54
MBD1-217ENST00000588937 CFHR3Q02985 330 aa11.71□□□□□ -0.54
MBD1-217ENST00000588937 DEFB113Q30KQ7 82 aa11.71□□□□□ -0.54
MBD1-217ENST00000588937 DEFB112Q30KQ8 113 aa11.71□□□□□ -0.54
MBD1-217ENST00000588937 TMEM78Q5T7P6 136 aa11.71□□□□□ -0.54
MBD1-217ENST00000588937 LYZL1Q6UWQ5 148 aa11.71□□□□□ -0.54
MBD1-217ENST00000588937 FAM19A2Q8N3H0 131 aa11.71□□□□□ -0.54
MBD1-217ENST00000588937 OR4X2Q8NGF9 303 aa11.71□□□□□ -0.54
MBD1-217ENST00000588937 C16orf92Q96LL3 132 aa11.71□□□□□ -0.54
MBD1-217ENST00000588937 NAV2Q8IVL1 2488 aa11.71□□□□□ -0.54
MBD1-217ENST00000588937 HECTD1Q9ULT8 2610 aa11.7□□□□□ -0.54
MBD1-217ENST00000588937 POLQO75417 2590 aa11.7□□□□□ -0.54
MBD1-217ENST00000588937 NBPF19A0A087WUL8 3843 aa11.7□□□□□ -0.54
MBD1-217ENST00000588937 TMSB15BA0A087X1C1 80 aa11.7□□□□□ -0.54
MBD1-217ENST00000588937 KIR2DL5BA0A0G2JN68 375 aa11.7□□□□□ -0.54
MBD1-217ENST00000588937 KIR2DL5BA0A0G2JPC4 375 aa11.7□□□□□ -0.54
MBD1-217ENST00000588937 PRAC2D3DTV9 90 aa11.7□□□□□ -0.54
MBD1-217ENST00000588937 ERCC8Q13216 396 aa11.7□□□□□ -0.54
MBD1-217ENST00000588937 PRSS57Q6UWY2 283 aa11.7□□□□□ -0.54
MBD1-217ENST00000588937 KIR2DL5AQ8N109 375 aa11.7□□□□□ -0.54
MBD1-217ENST00000588937 NPFFR1Q9GZQ6 430 aa11.7□□□□□ -0.54
MBD1-217ENST00000588937 PPP1R14DQ9NXH3 145 aa11.7□□□□□ -0.54
MBD1-217ENST00000588937 TRBV12-3P01733 135 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 ZNF80P51504 273 aaPredicted RBP11.69□□□□□ -0.54
MBD1-217ENST00000588937 ZNF138P52744 262 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 C9orf47Q6ZRZ4 202 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 C14orf144Q96I85 54 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 KLK15Q9H2R5 256 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.69□□□□□ -0.542e-7■■■■□ 21.5
MBD1-217ENST00000588937 TMEM89A2RUT3 159 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 IGHV3-11P01762 117 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 IGHV4-59P01825 116 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 ORM1P02763 201 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 LINC00614P0C842 121 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 C3orf79P0CE67 100 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 CTRLP40313 264 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 HIST1H1AQ02539 215 aaPredicted RBP11.69□□□□□ -0.54
MBD1-217ENST00000588937 UNQ9165/PRO28630Q6UXU0 137 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 Q6ZS46 218 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 FER1L6-AS1Q8NA97 138 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 NDUFAF3Q9BU61 184 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 VAMP8Q9BV40 100 aa11.69□□□□□ -0.54
MBD1-217ENST00000588937 RNF223E7ERA6 249 aa11.68□□□□□ -0.54
MBD1-217ENST00000588937 LINC01559Q495D7 138 aa11.68□□□□□ -0.54
MBD1-217ENST00000588937 AGPAT4-IT1Q9H0P7 198 aa11.68□□□□□ -0.54
MBD1-217ENST00000588937 CSMD2Q7Z408 3487 aa11.68□□□□□ -0.54
MBD1-217ENST00000588937 SVEP1Q4LDE5 3571 aa11.68□□□□□ -0.54
MBD1-217ENST00000588937 FAM181BA6NEQ2 426 aa11.67□□□□□ -0.54
MBD1-217ENST00000588937 IGLC6P0CF74 106 aa11.67□□□□□ -0.54
MBD1-217ENST00000588937 IL17RELQ6ZVW7 336 aa11.67□□□□□ -0.54
MBD1-217ENST00000588937 C20orf144Q9BQM9 153 aa11.67□□□□□ -0.54
MBD1-217ENST00000588937 LENEPQ9Y5L5 61 aa11.67□□□□□ -0.54
MBD1-217ENST00000588937 BAHCC1Q9P281 2608 aa11.67□□□□□ -0.54
MBD1-217ENST00000588937 SMAD7O15105 426 aaKnown RBP11.67□□□□□ -0.54
MBD1-217ENST00000588937 IGHV4-31P0DP07 118 aa11.67□□□□□ -0.54
MBD1-217ENST00000588937 URB1-AS1Q96HZ7 61 aa11.67□□□□□ -0.54
MBD1-217ENST00000588937 PEF1Q9UBV8 284 aaKnown RBP11.67□□□□□ -0.54
MBD1-217ENST00000588937 RNF114Q9Y508 228 aa11.67□□□□□ -0.54
MBD1-217ENST00000588937 OR5AL1P0C617 328 aa11.66□□□□□ -0.54
MBD1-217ENST00000588937 BTF3P20290 206 aaKnown RBP11.66□□□□□ -0.54
MBD1-217ENST00000588937 FAM106AQ4KMX7 169 aa11.66□□□□□ -0.54
MBD1-217ENST00000588937 PRR31Q5SQ13 230 aa11.66□□□□□ -0.54
MBD1-217ENST00000588937 FAM104BQ5XKR9 115 aa11.66□□□□□ -0.54
MBD1-217ENST00000588937 Q8N976 141 aa11.66□□□□□ -0.54
MBD1-217ENST00000588937 IGHV7-4-1A0A0J9YVY3 117 aa11.65□□□□□ -0.54
MBD1-217ENST00000588937 K7EMT4 169 aa11.65□□□□□ -0.54
MBD1-217ENST00000588937 OVOL1O14753 267 aa11.65□□□□□ -0.54
MBD1-217ENST00000588937 PSMB8P28062 276 aa11.65□□□□□ -0.54
MBD1-217ENST00000588937 PMCHL1Q16048 86 aa11.65□□□□□ -0.54
MBD1-217ENST00000588937 HIST2H2BCQ6DN03 193 aa11.65□□□□□ -0.54
MBD1-217ENST00000588937 MAPK1IP1LQ8NDC0 245 aa11.65□□□□□ -0.54
MBD1-217ENST00000588937 ZNF738Q8NE65 137 aa11.65□□□□□ -0.54
MBD1-217ENST00000588937 LINC00477Q96M19 166 aa11.65□□□□□ -0.54
MBD1-217ENST00000588937 DAZ1Q9NQZ3 744 aaKnown RBP11.65□□□□□ -0.54
MBD1-217ENST00000588937 VPREB3Q9UKI3 123 aa11.65□□□□□ -0.54
MBD1-217ENST00000588937 FSHBP01225 129 aa11.64□□□□□ -0.55
MBD1-217ENST00000588937 TWIST1Q15672 202 aa11.64□□□□□ -0.55
MBD1-217ENST00000588937 LBHQ53QV2 105 aaPredicted RBP11.64□□□□□ -0.55
MBD1-217ENST00000588937 Q5PR19 223 aa11.64□□□□□ -0.55
MBD1-217ENST00000588937 CNFNQ9BYD5 112 aa11.64□□□□□ -0.55
MBD1-217ENST00000588937 MAP1AP78559 2803 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms