RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 LINC01587Q99440 93 aa11.48□□□□□ -0.57
RETREG3-206ENST00000588423 AGPAT4-IT1Q9H0P7 198 aa11.48□□□□□ -0.57
RETREG3-206ENST00000588423 Q9H3A6 140 aa11.48□□□□□ -0.57
RETREG3-206ENST00000588423 TENM2Q9NT68 2774 aa11.48□□□□□ -0.57
RETREG3-206ENST00000588423 RBAKDNA6NC62 111 aa11.47□□□□□ -0.57
RETREG3-206ENST00000588423 SLC25A5P05141 298 aaKnown RBP11.47□□□□□ -0.57
RETREG3-206ENST00000588423 NMBP08949 121 aa11.47□□□□□ -0.57
RETREG3-206ENST00000588423 RANP62826 216 aaKnown RBP11.47□□□□□ -0.57
RETREG3-206ENST00000588423 ZFP69Q49AA0 526 aa11.47□□□□□ -0.57
RETREG3-206ENST00000588423 GFI1BQ5VTD9 330 aa11.47□□□□□ -0.57
RETREG3-206ENST00000588423 KCNRGQ8N5I3 272 aa11.47□□□□□ -0.57
RETREG3-206ENST00000588423 ARL6IP6Q8N6S5 226 aa11.47□□□□□ -0.57
RETREG3-206ENST00000588423 LINC00476Q8WZB0 136 aa11.47□□□□□ -0.57
RETREG3-206ENST00000588423 NIPSNAP3BQ9BS92 247 aa11.47□□□□□ -0.57
RETREG3-206ENST00000588423 SACSQ9NZJ4 4579 aa11.47□□□□□ -0.57
RETREG3-206ENST00000588423 A0A0D9SG52 128 aa11.46□□□□□ -0.57
RETREG3-206ENST00000588423 TRBV7-9A0A0J9YWB2 115 aa11.46□□□□□ -0.57
RETREG3-206ENST00000588423 LYRM9A8MSI8 78 aa11.46□□□□□ -0.57
RETREG3-206ENST00000588423 KLLNB2CW77 178 aa11.46□□□□□ -0.57
RETREG3-206ENST00000588423 STAG3L2P0CL84 134 aa11.46□□□□□ -0.57
RETREG3-206ENST00000588423 STAG3L3P0CL85 134 aa11.46□□□□□ -0.57
RETREG3-206ENST00000588423 CRISP2P16562 243 aa11.46□□□□□ -0.57
RETREG3-206ENST00000588423 KIR3DS1Q14943 382 aa11.46□□□□□ -0.57
RETREG3-206ENST00000588423 FAM74A1Q5RGS3 127 aa11.46□□□□□ -0.57
RETREG3-206ENST00000588423 TMEM78Q5T7P6 136 aa11.46□□□□□ -0.57
RETREG3-206ENST00000588423 ZNF493Q6ZR52 646 aa11.46□□□□□ -0.57
RETREG3-206ENST00000588423 RXFP4Q8TDU9 374 aa11.46□□□□□ -0.57
RETREG3-206ENST00000588423 C16orf74Q96GX8 76 aa11.46□□□□□ -0.57
RETREG3-206ENST00000588423 SH3BGRL3Q9H299 93 aa11.46□□□□□ -0.57
RETREG3-206ENST00000588423 IGKV2-40A0A087WW87 121 aaPredicted RBP11.45□□□□□ -0.58
RETREG3-206ENST00000588423 DEFB131BA0A096LNP1 70 aa11.45□□□□□ -0.58
RETREG3-206ENST00000588423 PLAC8L1A1L4L8 177 aa11.45□□□□□ -0.58
RETREG3-206ENST00000588423 IGKV2D-40P01614 121 aaPredicted RBP11.45□□□□□ -0.58
RETREG3-206ENST00000588423 AZU1P20160 251 aa11.45□□□□□ -0.58
RETREG3-206ENST00000588423 LGALSLQ3ZCW2 172 aaPredicted RBP11.45□□□□□ -0.58
RETREG3-206ENST00000588423 ZNF767PQ75MW2 155 aa11.45□□□□□ -0.58
RETREG3-206ENST00000588423 SUN5Q8TC36 379 aa11.45□□□□□ -0.58
RETREG3-206ENST00000588423 RAB24Q969Q5 203 aa11.45□□□□□ -0.58
RETREG3-206ENST00000588423 VGLL1Q99990 258 aa11.45□□□□□ -0.58
RETREG3-206ENST00000588423 OTORQ9NRC9 128 aa11.45□□□□□ -0.58
RETREG3-206ENST00000588423 ZNF492Q9P255 531 aa11.45□□□□□ -0.58
RETREG3-206ENST00000588423 IGLL5B9A064 214 aa11.44□□□□□ -0.58
RETREG3-206ENST00000588423 EIF3GO75821 320 aaKnown RBP eCLIP11.44□□□□□ -0.58
RETREG3-206ENST00000588423 PRM2P04554 102 aa11.44□□□□□ -0.58
RETREG3-206ENST00000588423 ARL14EPLP0DKL9 152 aa11.44□□□□□ -0.58
RETREG3-206ENST00000588423 RNASE8Q8TDE3 154 aaKnown RBP11.44□□□□□ -0.58
RETREG3-206ENST00000588423 TMEM263Q8WUH6 116 aaKnown RBP11.44□□□□□ -0.58
RETREG3-206ENST00000588423 PYGO2Q9BRQ0 406 aa11.44□□□□□ -0.58
RETREG3-206ENST00000588423 ACTR3CQ9C0K3 210 aaPredicted RBP11.44□□□□□ -0.58
RETREG3-206ENST00000588423 CYTL1Q9NRR1 136 aa11.44□□□□□ -0.58
RETREG3-206ENST00000588423 C7orf71A4D174 169 aa11.43□□□□□ -0.58
RETREG3-206ENST00000588423 PGPA6NDG6 321 aa11.43□□□□□ -0.58
RETREG3-206ENST00000588423 DIRC3C9JPN6 131 aa11.43□□□□□ -0.58
RETREG3-206ENST00000588423 HMGB3O15347 200 aaKnown RBP11.43□□□□□ -0.58
RETREG3-206ENST00000588423 ZNF138P52744 262 aa11.43□□□□□ -0.58
RETREG3-206ENST00000588423 LGALS9CQ6DKI2 356 aa11.43□□□□□ -0.58
RETREG3-206ENST00000588423 LINC00467Q9BRT7 94 aa11.43□□□□□ -0.58
RETREG3-206ENST00000588423 APLNQ9ULZ1 77 aa11.43□□□□□ -0.58
RETREG3-206ENST00000588423 LENEPQ9Y5L5 61 aa11.43□□□□□ -0.58
RETREG3-206ENST00000588423 ALMS1Q8TCU4 4167 aa11.43□□□□□ -0.58
RETREG3-206ENST00000588423 IGHV4-4A0A075B6R2 117 aa11.42□□□□□ -0.58
RETREG3-206ENST00000588423 TRAV12-3A0A0B4J271 114 aa11.42□□□□□ -0.58
RETREG3-206ENST00000588423 J3KRW8 73 aa11.42□□□□□ -0.58
RETREG3-206ENST00000588423 ZNF324O75467 553 aaPredicted RBP11.42□□□□□ -0.58
RETREG3-206ENST00000588423 LY6G6CO95867 125 aa11.42□□□□□ -0.58
RETREG3-206ENST00000588423 CXorf1O96002 111 aa11.42□□□□□ -0.58
RETREG3-206ENST00000588423 HTN1P15515 57 aa11.42□□□□□ -0.58
RETREG3-206ENST00000588423 DAD1P61803 113 aa11.42□□□□□ -0.58
RETREG3-206ENST00000588423 TMUB2Q71RG4 321 aa11.42□□□□□ -0.58
RETREG3-206ENST00000588423 CCDC28AQ8IWP9 274 aa11.42□□□□□ -0.58
RETREG3-206ENST00000588423 C9orf62Q8N4C0 152 aa11.42□□□□□ -0.58
RETREG3-206ENST00000588423 ZFAND2AQ8N6M9 145 aa11.42□□□□□ -0.58
RETREG3-206ENST00000588423 CMTM2Q8TAZ6 248 aa11.42□□□□□ -0.58
RETREG3-206ENST00000588423 TMED6Q8WW62 240 aa11.42□□□□□ -0.58
RETREG3-206ENST00000588423 FAM210BQ96KR6 192 aa11.42□□□□□ -0.58
RETREG3-206ENST00000588423 ARPC5LQ9BPX5 153 aa11.42□□□□□ -0.58
RETREG3-206ENST00000588423 TIMM8BQ9Y5J9 83 aaPredicted RBP11.42□□□□□ -0.58
RETREG3-206ENST00000588423 BCL2L11O43521 198 aa11.41□□□□□ -0.58
RETREG3-206ENST00000588423 GPX1P07203 203 aa11.41□□□□□ -0.58
RETREG3-206ENST00000588423 GCHFRP30047 84 aa11.41□□□□□ -0.58
RETREG3-206ENST00000588423 TMEM167BQ9NRX6 74 aa11.41□□□□□ -0.58
RETREG3-206ENST00000588423 CTXND1A0A1B0GTU2 59 aa11.4□□□□□ -0.58
RETREG3-206ENST00000588423 BTN1A1Q13410 526 aa11.4□□□□□ -0.58
RETREG3-206ENST00000588423 AKR1C8PQ5T2L2 129 aa11.4□□□□□ -0.58
RETREG3-206ENST00000588423 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
RETREG3-206ENST00000588423 SERTM2A0A1B0GWG4 89 aa11.39□□□□□ -0.59
RETREG3-206ENST00000588423 KANTRA0A1W2PQU2 76 aa11.39□□□□□ -0.59
RETREG3-206ENST00000588423 RNASE4P34096 147 aaKnown RBP11.39□□□□□ -0.59
RETREG3-206ENST00000588423 ANXA2RQ3ZCQ2 193 aa11.39□□□□□ -0.59
RETREG3-206ENST00000588423 SSX7Q7RTT5 188 aa11.39□□□□□ -0.59
RETREG3-206ENST00000588423 Q8TAT8 98 aa11.39□□□□□ -0.59
RETREG3-206ENST00000588423 NDUFAF3Q9BU61 184 aa11.39□□□□□ -0.59
RETREG3-206ENST00000588423 HYDINQ4G0P3 5121 aa11.39□□□□□ -0.59
RETREG3-206ENST00000588423 DNAH1Q9P2D7 4330 aa11.39□□□□□ -0.59
RETREG3-206ENST00000588423 NKX2-5P52952 324 aaPredicted RBP11.38□□□□□ -0.59
RETREG3-206ENST00000588423 ZNF726P1Q15940 193 aa11.38□□□□□ -0.59
RETREG3-206ENST00000588423 PRR9Q5T870 116 aa11.38□□□□□ -0.59
RETREG3-206ENST00000588423 EIF4E3Q8N5X7 224 aaKnown RBP11.38□□□□□ -0.59
RETREG3-206ENST00000588423 C5orf17Q8NAS9 161 aa11.38□□□□□ -0.59
RETREG3-206ENST00000588423 ZNF680Q8NEM1 530 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms