RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 SLC35B3Q9H1N7 401 aa11.32□□□□□ -0.6
NCLN-203ENST00000587740 Q9H3A6 140 aa11.32□□□□□ -0.6
NCLN-203ENST00000587740 PKD1P98161 4303 aa11.31□□□□□ -0.6
NCLN-203ENST00000587740 UMAD1C9J7I0 102 aa11.31□□□□□ -0.6
NCLN-203ENST00000587740 GCHFRP30047 84 aa11.31□□□□□ -0.6
NCLN-203ENST00000587740 CSN1S1P47710 185 aa11.31□□□□□ -0.6
NCLN-203ENST00000587740 TCTAP57738 103 aa11.31□□□□□ -0.6
NCLN-203ENST00000587740 ZNF726P1Q15940 193 aa11.31□□□□□ -0.6
NCLN-203ENST00000587740 FAM74A1Q5RGS3 127 aa11.31□□□□□ -0.6
NCLN-203ENST00000587740 AMTNQ6UX39 209 aa11.31□□□□□ -0.6
NCLN-203ENST00000587740 LINC00336Q6ZUF6 198 aa11.31□□□□□ -0.6
NCLN-203ENST00000587740 SSX7Q7RTT5 188 aa11.31□□□□□ -0.6
NCLN-203ENST00000587740 SLC51BQ86UW2 128 aa11.31□□□□□ -0.6
NCLN-203ENST00000587740 IQCF2Q8IXL9 164 aa11.31□□□□□ -0.6
NCLN-203ENST00000587740 OR11H2Q8NH07 326 aa11.31□□□□□ -0.6
NCLN-203ENST00000587740 TMEM167BQ9NRX6 74 aa11.31□□□□□ -0.6
NCLN-203ENST00000587740 IGLL5B9A064 214 aa11.3□□□□□ -0.6
NCLN-203ENST00000587740 AMBPP02760 352 aa11.3□□□□□ -0.6
NCLN-203ENST00000587740 EIF5AL1Q6IS14 154 aaKnown RBP11.3□□□□□ -0.6
NCLN-203ENST00000587740 C9orf62Q8N4C0 152 aa11.3□□□□□ -0.6
NCLN-203ENST00000587740 TMED6Q8WW62 240 aa11.3□□□□□ -0.6
NCLN-203ENST00000587740 OTORQ9NRC9 128 aa11.3□□□□□ -0.6
NCLN-203ENST00000587740 PGPA6NDG6 321 aa11.29□□□□□ -0.6
NCLN-203ENST00000587740 BOLA2-SMG1P6H3BVE0 249 aa11.29□□□□□ -0.6
NCLN-203ENST00000587740 SPINK13Q1W4C9 94 aa11.29□□□□□ -0.6
NCLN-203ENST00000587740 CSNK1G2-AS1Q8NCQ2 148 aa11.29□□□□□ -0.6
NCLN-203ENST00000587740 CMTM2Q8TAZ6 248 aa11.29□□□□□ -0.6
NCLN-203ENST00000587740 SUN5Q8TC36 379 aa11.29□□□□□ -0.6
NCLN-203ENST00000587740 RXFP4Q8TDU9 374 aa11.29□□□□□ -0.6
NCLN-203ENST00000587740 MAP1LC3B2A6NCE7 125 aa11.28□□□□□ -0.6
NCLN-203ENST00000587740 NPIPB6E9PJ23 425 aa11.28□□□□□ -0.6
NCLN-203ENST00000587740 M0R2Z0 102 aa11.28□□□□□ -0.6
NCLN-203ENST00000587740 FGF8P55075 233 aaPredicted RBP11.28□□□□□ -0.6
NCLN-203ENST00000587740 DPPA3Q6W0C5 159 aa11.28□□□□□ -0.6
NCLN-203ENST00000587740 FAM213BQ8TBF2 198 aa11.28□□□□□ -0.6
NCLN-203ENST00000587740 MAP1LC3BQ9GZQ8 125 aa11.28□□□□□ -0.6
NCLN-203ENST00000587740 PLA2G2EQ9NZK7 142 aa11.28□□□□□ -0.6
NCLN-203ENST00000587740 IGKV2-40A0A087WW87 121 aaPredicted RBP11.27□□□□□ -0.61
NCLN-203ENST00000587740 IGKV2D-40P01614 121 aaPredicted RBP11.27□□□□□ -0.61
NCLN-203ENST00000587740 TSPOP30536 169 aa11.27□□□□□ -0.61
NCLN-203ENST00000587740 CDKN1BP46527 198 aa11.27□□□□□ -0.61
NCLN-203ENST00000587740 FHITP49789 147 aa11.27□□□□□ -0.61
NCLN-203ENST00000587740 ERCC8Q13216 396 aa11.27□□□□□ -0.61
NCLN-203ENST00000587740 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.61
NCLN-203ENST00000587740 IGF2BP2-AS1Q96M15 143 aa11.27□□□□□ -0.61
NCLN-203ENST00000587740 LINC00477Q96M19 166 aa11.27□□□□□ -0.61
NCLN-203ENST00000587740 GOLT1BQ9Y3E0 138 aa11.27□□□□□ -0.61
NCLN-203ENST00000587740 IGHV3OR16-12A0A075B7B8 117 aa11.26□□□□□ -0.61
NCLN-203ENST00000587740 ZNF705EA8MWA4 302 aaPredicted RBP11.26□□□□□ -0.61
NCLN-203ENST00000587740 RTL8CO15255 209 aa11.26□□□□□ -0.61
NCLN-203ENST00000587740 LEPP41159 167 aa11.26□□□□□ -0.61
NCLN-203ENST00000587740 RAB5CP51148 216 aa11.26□□□□□ -0.61
NCLN-203ENST00000587740 NKX2-5P52952 324 aaPredicted RBP11.26□□□□□ -0.61
NCLN-203ENST00000587740 C9orf47Q6ZRZ4 202 aa11.26□□□□□ -0.61
NCLN-203ENST00000587740 ARL6IP6Q8N6S5 226 aa11.26□□□□□ -0.61
NCLN-203ENST00000587740 ODF3Q96PU9 254 aa11.26□□□□□ -0.61
NCLN-203ENST00000587740 AGPAT4-IT1Q9H0P7 198 aa11.26□□□□□ -0.61
NCLN-203ENST00000587740 TMPRSS5Q9H3S3 457 aa11.26□□□□□ -0.61
NCLN-203ENST00000587740 RPH3ALQ9UNE2 315 aa11.26□□□□□ -0.61
NCLN-203ENST00000587740 TRAV12-2A0A075B6T6 113 aa11.25□□□□□ -0.61
NCLN-203ENST00000587740 A0A1W2PRE2 83 aa11.25□□□□□ -0.61
NCLN-203ENST00000587740 RBAKDNA6NC62 111 aa11.25□□□□□ -0.61
NCLN-203ENST00000587740 DIRC3C9JPN6 131 aa11.25□□□□□ -0.61
NCLN-203ENST00000587740 CRXO43186 299 aaPredicted RBP11.25□□□□□ -0.61
NCLN-203ENST00000587740 INSP01308 110 aa11.25□□□□□ -0.61
NCLN-203ENST00000587740 SLC25A5P05141 298 aaKnown RBP11.25□□□□□ -0.61
NCLN-203ENST00000587740 CT45A10P0DMU9 189 aa11.25□□□□□ -0.61
NCLN-203ENST00000587740 MIFP14174 115 aa11.25□□□□□ -0.61
NCLN-203ENST00000587740 SFT2D1Q8WV19 159 aa11.25□□□□□ -0.61
NCLN-203ENST00000587740 MBD3L1Q8WWY6 194 aa11.25□□□□□ -0.61
NCLN-203ENST00000587740 VGLL1Q99990 258 aa11.25□□□□□ -0.61
NCLN-203ENST00000587740 TMEM208Q9BTX3 173 aa11.25□□□□□ -0.61
NCLN-203ENST00000587740 C11orf94C9JXX5 98 aa11.24□□□□□ -0.61
NCLN-203ENST00000587740 H2AFB1P0C5Y9 115 aa11.24□□□□□ -0.61
NCLN-203ENST00000587740 RBMY1A1P0DJD3 496 aaKnown RBP11.24□□□□□ -0.61
NCLN-203ENST00000587740 RBMY1CP0DJD4 496 aa11.24□□□□□ -0.61
NCLN-203ENST00000587740 SUMO1P63165 101 aaKnown RBP11.24□□□□□ -0.61
NCLN-203ENST00000587740 RBMY1FQ15415 496 aaKnown RBP11.24□□□□□ -0.61
NCLN-203ENST00000587740 ZNF705AQ6ZN79 300 aaPredicted RBP11.24□□□□□ -0.61
NCLN-203ENST00000587740 C1orf158Q8N1D5 194 aa11.24□□□□□ -0.61
NCLN-203ENST00000587740 Q8NAQ8 132 aa11.24□□□□□ -0.61
NCLN-203ENST00000587740 X6R8D5 127 aa11.24□□□□□ -0.61
NCLN-203ENST00000587740 HSPG2P98160 4391 aa11.23□□□□□ -0.61
NCLN-203ENST00000587740 PRSS29PA6NIE9 313 aa11.23□□□□□ -0.61
NCLN-203ENST00000587740 J3KRW8 73 aa11.23□□□□□ -0.61
NCLN-203ENST00000587740 SULT1A2P50226 295 aa11.23□□□□□ -0.61
NCLN-203ENST00000587740 UBE2G2P60604 165 aa11.23□□□□□ -0.61
NCLN-203ENST00000587740 C5orf17Q8NAS9 161 aa11.23□□□□□ -0.61
NCLN-203ENST00000587740 NEU1Q99519 415 aa11.23□□□□□ -0.61
NCLN-203ENST00000587740 ZNF492Q9P255 531 aa11.23□□□□□ -0.61
NCLN-203ENST00000587740 IGHV4-4A0A075B6R2 117 aa11.22□□□□□ -0.61
NCLN-203ENST00000587740 IGHV4-28A0A0C4DH34 117 aa11.22□□□□□ -0.61
NCLN-203ENST00000587740 SMIM9A6NGZ8 99 aa11.22□□□□□ -0.61
NCLN-203ENST00000587740 ZNF138P52744 262 aa11.22□□□□□ -0.61
NCLN-203ENST00000587740 GNG5P63218 68 aa11.22□□□□□ -0.61
NCLN-203ENST00000587740 Q6ZTC4 211 aa11.22□□□□□ -0.61
NCLN-203ENST00000587740 GOLT1AQ6ZVE7 132 aa11.22□□□□□ -0.61
NCLN-203ENST00000587740 TMEM256Q8N2U0 113 aa11.22□□□□□ -0.61
NCLN-203ENST00000587740 NKX6-2Q9C056 277 aaPredicted RBP11.22□□□□□ -0.61
NCLN-203ENST00000587740 A0A1B0GV50 99 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms