RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 SMIM17P0DL12 118 aa10.9□□□□□ -0.66
CACNA1A-209ENST00000587525 LEPP41159 167 aa10.9□□□□□ -0.66
CACNA1A-209ENST00000587525 SPATA12Q7Z6I5 190 aa10.9□□□□□ -0.66
CACNA1A-209ENST00000587525 ORMDL3Q8N138 153 aa10.9□□□□□ -0.66
CACNA1A-209ENST00000587525 APOMO95445 188 aa10.9□□□□□ -0.67
CACNA1A-209ENST00000587525 Q1RN00 199 aa10.9□□□□□ -0.67
CACNA1A-209ENST00000587525 SAMD5Q5TGI4 173 aa10.9□□□□□ -0.67
CACNA1A-209ENST00000587525 VGLL1Q99990 258 aa10.9□□□□□ -0.67
CACNA1A-209ENST00000587525 SH2D1AO60880 128 aa10.89□□□□□ -0.67
CACNA1A-209ENST00000587525 CGB3P0DN86 165 aa10.89□□□□□ -0.67
CACNA1A-209ENST00000587525 CGB7P0DN87 165 aa10.89□□□□□ -0.67
CACNA1A-209ENST00000587525 TRGV9Q99603 122 aa10.89□□□□□ -0.67
CACNA1A-209ENST00000587525 CIDEAO60543 219 aa10.89□□□□□ -0.67
CACNA1A-209ENST00000587525 ATP5IP56385 69 aaPredicted RBP10.89□□□□□ -0.67
CACNA1A-209ENST00000587525 C5orf64Q2M2E5 130 aa10.89□□□□□ -0.67
CACNA1A-209ENST00000587525 FAM120AOSQ5T036 256 aa10.89□□□□□ -0.67
CACNA1A-209ENST00000587525 PET117Q6UWS5 81 aa10.89□□□□□ -0.67
CACNA1A-209ENST00000587525 IFI27L1Q96BM0 104 aa10.89□□□□□ -0.67
CACNA1A-209ENST00000587525 COL25A1Q9BXS0 654 aaPredicted RBP10.89□□□□□ -0.67
CACNA1A-209ENST00000587525 ASH1LQ9NR48 2969 aaKnown RBP10.89□□□□□ -0.67
CACNA1A-209ENST00000587525 TCF15Q12870 199 aa10.89□□□□□ -0.67
CACNA1A-209ENST00000587525 FAM106AQ4KMX7 169 aa10.89□□□□□ -0.67
CACNA1A-209ENST00000587525 CD5LO43866 347 aa10.88□□□□□ -0.67
CACNA1A-209ENST00000587525 IGKV1-17P01599 117 aa10.88□□□□□ -0.67
CACNA1A-209ENST00000587525 IGLV2-8P01709 118 aa10.88□□□□□ -0.67
CACNA1A-209ENST00000587525 ETDBQ3ZM63 59 aa10.88□□□□□ -0.67
CACNA1A-209ENST00000587525 METTL26Q96S19 204 aa10.88□□□□□ -0.67
CACNA1A-209ENST00000587525 MAP1LC3AQ9H492 121 aa10.88□□□□□ -0.67
CACNA1A-209ENST00000587525 ZNF462Q96JM2 2506 aa10.88□□□□□ -0.67
CACNA1A-209ENST00000587525 SHISA9B4DS77 424 aa10.88□□□□□ -0.67
CACNA1A-209ENST00000587525 DLX6P56179 175 aa10.88□□□□□ -0.67
CACNA1A-209ENST00000587525 NUP37Q8NFH4 326 aa10.88□□□□□ -0.67
CACNA1A-209ENST00000587525 RELNP78509 3460 aa10.88□□□□□ -0.67
CACNA1A-209ENST00000587525 BPESC1Q9GZL8 116 aa10.88□□□□□ -0.67
CACNA1A-209ENST00000587525 IGKV1D-37A0A075B6S9 117 aa10.87□□□□□ -0.67
CACNA1A-209ENST00000587525 TRAV40A0A0B4J280 105 aa10.87□□□□□ -0.67
CACNA1A-209ENST00000587525 TOMM40O96008 361 aa10.87□□□□□ -0.67
CACNA1A-209ENST00000587525 CTRLP40313 264 aa10.87□□□□□ -0.67
CACNA1A-209ENST00000587525 TEX36Q5VZQ5 186 aa10.87□□□□□ -0.67
CACNA1A-209ENST00000587525 C11orf44Q8N8P7 122 aa10.87□□□□□ -0.67
CACNA1A-209ENST00000587525 MYOZ3Q8TDC0 251 aa10.87□□□□□ -0.67
CACNA1A-209ENST00000587525 PHLDA3Q9Y5J5 127 aa10.87□□□□□ -0.67
CACNA1A-209ENST00000587525 TMEM238C9JI98 176 aa10.87□□□□□ -0.67
CACNA1A-209ENST00000587525 BMI1P35226 326 aa10.87□□□□□ -0.67
CACNA1A-209ENST00000587525 BEX4Q9NWD9 120 aaPredicted RBP10.87□□□□□ -0.67
CACNA1A-209ENST00000587525 LY96Q9Y6Y9 160 aa10.87□□□□□ -0.67
CACNA1A-209ENST00000587525 DKK2Q9UBU2 259 aa10.87□□□□□ -0.67
CACNA1A-209ENST00000587525 C2orf70A6NJV1 201 aa10.86□□□□□ -0.67
CACNA1A-209ENST00000587525 PCSK5Q92824 1860 aa10.86□□□□□ -0.67
CACNA1A-209ENST00000587525 RNASE4P34096 147 aaKnown RBP10.86□□□□□ -0.67
CACNA1A-209ENST00000587525 LOXL1Q08397 574 aaPredicted RBP10.86□□□□□ -0.67
CACNA1A-209ENST00000587525 JMJD8Q96S16 334 aa10.86□□□□□ -0.67
CACNA1A-209ENST00000587525 FASNP49327 2511 aaKnown RBP10.86□□□□□ -0.67
CACNA1A-209ENST00000587525 IGHV3OR16-12A0A075B7B8 117 aa10.86□□□□□ -0.67
CACNA1A-209ENST00000587525 ATP5J2P56134 94 aa10.86□□□□□ -0.67
CACNA1A-209ENST00000587525 VKORC1Q9BQB6 163 aa10.86□□□□□ -0.67
CACNA1A-209ENST00000587525 POU2AF1Q16633 256 aa10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 Q8N976 141 aa10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 IGF2BP2-AS1Q96M15 143 aa10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 SRSF8Q9BRL6 282 aaKnown RBP10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 TRBV19A0A075B6N1 114 aa10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 TMEM30BQ3MIR4 351 aa10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 C3orf36Q3SXR2 165 aa10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 IGFL2Q6UWQ7 119 aa10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 NEGR1Q7Z3B1 354 aa10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 MRPL52Q86TS9 123 aaKnown RBP10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 CHCHD1Q96BP2 118 aaKnown RBP10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 DOPEY1Q5JWR5 2465 aa10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 IGLV2-23P01705 113 aa10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 SAA4P35542 130 aa10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 PSMB2P49721 201 aa10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 PAX2Q02962 417 aa10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 SH2D6Q7Z4S9 175 aa10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 DEFB125Q8N687 156 aa10.85□□□□□ -0.67
CACNA1A-209ENST00000587525 ZC2HC1BQ5TFG8 222 aa10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 ADAMTSL5Q6ZMM2 481 aa10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 ZNF491Q8N8L2 437 aa10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 TSSC4Q9Y5U2 329 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 IGHV3-64A0A075B6Q5 118 aa10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 VWC2LB2RUY7 222 aa10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 ESDP10768 282 aa10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 PAX1P15863 534 aa10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 ATP5G2Q06055 141 aa10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 SP5Q6BEB4 398 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 IL17RELQ6ZVW7 336 aa10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 LINC00477Q96M19 166 aa10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 PRRC2AP48634 2157 aaKnown RBP10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 ATP6V0E1O15342 81 aa10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 HBDP02042 147 aa10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 SHANK2-AS3Q9BTD1 123 aa10.84□□□□□ -0.67
CACNA1A-209ENST00000587525 FABP5P3A8MUU1 101 aa10.83□□□□□ -0.68
CACNA1A-209ENST00000587525 F6UB75 175 aa10.83□□□□□ -0.68
CACNA1A-209ENST00000587525 Q8NA96 180 aa10.83□□□□□ -0.68
CACNA1A-209ENST00000587525 CYSLTR1Q9Y271 337 aa10.83□□□□□ -0.68
CACNA1A-209ENST00000587525 ZNF256Q9Y2P7 627 aaPredicted RBP10.83□□□□□ -0.68
CACNA1A-209ENST00000587525 COL5A1P20908 1838 aaPredicted RBP10.83□□□□□ -0.68
CACNA1A-209ENST00000587525 TEX48A0A1B0GUV7 120 aa10.83□□□□□ -0.68
CACNA1A-209ENST00000587525 CSTL1Q9H114 145 aa10.83□□□□□ -0.68
CACNA1A-209ENST00000587525 NPYP01303 97 aa10.82□□□□□ -0.68
CACNA1A-209ENST00000587525 TMEM249Q2WGJ8 235 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms