RNA–Protein interactions for RNA: ENST00000586913.1

RFX1-202, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-202ENST00000586913 FAM122CQ6P4D5 195 aa12.16□□□□□ -0.46
RFX1-202ENST00000586913 CCDC28AQ8IWP9 274 aa12.16□□□□□ -0.46
RFX1-202ENST00000586913 KMT2AQ03164 3969 aa12.15□□□□□ -0.46
RFX1-202ENST00000586913 TRAV12-3A0A0B4J271 114 aa12.15□□□□□ -0.46
RFX1-202ENST00000586913 A0A1W2PPV4 95 aa12.15□□□□□ -0.46
RFX1-202ENST00000586913 RBAKDNA6NC62 111 aa12.15□□□□□ -0.46
RFX1-202ENST00000586913 P0DMU3 169 aa12.15□□□□□ -0.46
RFX1-202ENST00000586913 FAM231AP0DMU4 169 aa12.15□□□□□ -0.46
RFX1-202ENST00000586913 FAM231CP0DMU5 169 aa12.15□□□□□ -0.46
RFX1-202ENST00000586913 HTN1P15515 57 aa12.15□□□□□ -0.46
RFX1-202ENST00000586913 CSN1S1P47710 185 aa12.15□□□□□ -0.46
RFX1-202ENST00000586913 RANP62826 216 aaKnown RBP12.15□□□□□ -0.46
RFX1-202ENST00000586913 TMEM78Q5T7P6 136 aa12.15□□□□□ -0.46
RFX1-202ENST00000586913 INO80EQ8NBZ0 244 aaPredicted RBP12.15□□□□□ -0.46
RFX1-202ENST00000586913 LINC00467Q9BRT7 94 aa12.15□□□□□ -0.46
RFX1-202ENST00000586913 Q9H3A6 140 aa12.15□□□□□ -0.46
RFX1-202ENST00000586913 ZNF492Q9P255 531 aa12.15□□□□□ -0.46
RFX1-202ENST00000586913 IGKV2-40A0A087WW87 121 aaPredicted RBP12.14□□□□□ -0.47
RFX1-202ENST00000586913 C7orf71A4D174 169 aa12.14□□□□□ -0.47
RFX1-202ENST00000586913 CBY3A6NI87 242 aa12.14□□□□□ -0.47
RFX1-202ENST00000586913 IGKV2D-40P01614 121 aaPredicted RBP12.14□□□□□ -0.47
RFX1-202ENST00000586913 RAB2AP61019 212 aa12.14□□□□□ -0.47
RFX1-202ENST00000586913 SERF2P84101 59 aa12.14□□□□□ -0.47
RFX1-202ENST00000586913 ARL6IP6Q8N6S5 226 aa12.14□□□□□ -0.47
RFX1-202ENST00000586913 OR10G4Q8NGN3 311 aa12.14□□□□□ -0.47
RFX1-202ENST00000586913 OR10G9Q8NGN4 311 aa12.14□□□□□ -0.47
RFX1-202ENST00000586913 OR10G7Q8NGN6 311 aa12.14□□□□□ -0.47
RFX1-202ENST00000586913 OR2T35Q8NGX2 323 aa12.14□□□□□ -0.47
RFX1-202ENST00000586913 RXFP4Q8TDU9 374 aa12.14□□□□□ -0.47
RFX1-202ENST00000586913 VGLL1Q99990 258 aa12.14□□□□□ -0.47
RFX1-202ENST00000586913 TNFSF18Q9UNG2 199 aa12.14□□□□□ -0.47
RFX1-202ENST00000586913 RNF222A6NCQ9 220 aa12.13□□□□□ -0.47
RFX1-202ENST00000586913 J3KRW8 73 aa12.13□□□□□ -0.47
RFX1-202ENST00000586913 ZNF324O75467 553 aaPredicted RBP12.13□□□□□ -0.47
RFX1-202ENST00000586913 MBP02144 154 aa12.13□□□□□ -0.47
RFX1-202ENST00000586913 DEFB130BP0DP73 79 aa12.13□□□□□ -0.47
RFX1-202ENST00000586913 DEFB130AP0DP74 79 aa12.13□□□□□ -0.47
RFX1-202ENST00000586913 ZNF138P52744 262 aa12.13□□□□□ -0.47
RFX1-202ENST00000586913 ZFAND2AQ8N6M9 145 aa12.13□□□□□ -0.47
RFX1-202ENST00000586913 LINC00612Q8N6U2 182 aa12.13□□□□□ -0.47
RFX1-202ENST00000586913 HSD17B11Q8NBQ5 300 aa12.13□□□□□ -0.47
RFX1-202ENST00000586913 GPX1P07203 203 aa12.12□□□□□ -0.47
RFX1-202ENST00000586913 HTN3P15516 51 aa12.12□□□□□ -0.47
RFX1-202ENST00000586913 ATP6V0CP27449 155 aa12.12□□□□□ -0.47
RFX1-202ENST00000586913 NOP10Q9NPE3 64 aaKnown RBP12.12□□□□□ -0.47
RFX1-202ENST00000586913 OTORQ9NRC9 128 aa12.12□□□□□ -0.47
RFX1-202ENST00000586913 VPS13DQ5THJ4 4388 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 FXYD6-FXYD2A0A087WZ82 144 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 SNURFLB1AK76 121 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 DIRC3C9JPN6 131 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 ATP5G1P05496 136 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 STAG3L2P0CL84 134 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 STAG3L3P0CL85 134 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 ATP5G3P48201 142 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 CDC34P49427 236 aaPredicted RBP12.11□□□□□ -0.47
RFX1-202ENST00000586913 CD300CQ08708 224 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 DAZ2Q13117 558 aaKnown RBP12.11□□□□□ -0.47
RFX1-202ENST00000586913 ANXA2RQ3ZCQ2 193 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 FAM74A1Q5RGS3 127 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 TMEM88Q6PEY1 159 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 POM121L12Q8N7R1 296 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 C15orf53Q8NAA6 179 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 ZNF680Q8NEM1 530 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 TMED6Q8WW62 240 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 GNPNAT1Q96EK6 184 aaPredicted RBP12.11□□□□□ -0.47
RFX1-202ENST00000586913 LENEPQ9Y5L5 61 aa12.11□□□□□ -0.47
RFX1-202ENST00000586913 BORCS7-ASMTA0A0B4J1R7 106 aa12.1□□□□□ -0.47
RFX1-202ENST00000586913 G3V3Q6 166 aa12.1□□□□□ -0.47
RFX1-202ENST00000586913 RNASE4P34096 147 aaKnown RBP12.1□□□□□ -0.47
RFX1-202ENST00000586913 BTN1A1Q13410 526 aa12.1□□□□□ -0.47
RFX1-202ENST00000586913 EIF4E3Q8N5X7 224 aaKnown RBP12.1□□□□□ -0.47
RFX1-202ENST00000586913 PGPA6NDG6 321 aa12.09□□□□□ -0.47
RFX1-202ENST00000586913 EIF3GO75821 320 aaKnown RBP eCLIP12.09□□□□□ -0.47
RFX1-202ENST00000586913 SUN5Q8TC36 379 aa12.09□□□□□ -0.47
RFX1-202ENST00000586913 RAB24Q969Q5 203 aa12.09□□□□□ -0.47
RFX1-202ENST00000586913 F5H768 121 aa12.08□□□□□ -0.48
RFX1-202ENST00000586913 TAAR5O14804 337 aa12.08□□□□□ -0.48
RFX1-202ENST00000586913 ARL14EPLP0DKL9 152 aa12.08□□□□□ -0.48
RFX1-202ENST00000586913 RNF212Q495C1 297 aa12.08□□□□□ -0.48
RFX1-202ENST00000586913 IBA57Q5T440 356 aaKnown RBP12.08□□□□□ -0.48
RFX1-202ENST00000586913 RPL7L1Q6DKI1 246 aaKnown RBP12.08□□□□□ -0.48
RFX1-202ENST00000586913 C11orf72Q8NBR9 251 aa12.08□□□□□ -0.48
RFX1-202ENST00000586913 CMTM2Q8TAZ6 248 aa12.08□□□□□ -0.48
RFX1-202ENST00000586913 PRR9Q5T870 116 aa12.07□□□□□ -0.48
RFX1-202ENST00000586913 Q8TAT8 98 aa12.07□□□□□ -0.48
RFX1-202ENST00000586913 C18orf15Q96N68 181 aa12.07□□□□□ -0.48
RFX1-202ENST00000586913 ACTR3CQ9C0K3 210 aaPredicted RBP12.07□□□□□ -0.48
RFX1-202ENST00000586913 SH3BGRL3Q9H299 93 aa12.07□□□□□ -0.48
RFX1-202ENST00000586913 IGHV1OR15-1A0A075B7D0 117 aa12.06□□□□□ -0.48
RFX1-202ENST00000586913 HMGB3O15347 200 aaKnown RBP12.06□□□□□ -0.48
RFX1-202ENST00000586913 ST6GAL2Q96JF0 529 aa12.06□□□□□ -0.48
RFX1-202ENST00000586913 HYLS1Q96M11 299 aa12.06□□□□□ -0.48
RFX1-202ENST00000586913 GSN-AS1Q9NRJ2 163 aa12.06□□□□□ -0.48
RFX1-202ENST00000586913 DNAH6Q9C0G6 4158 aa12.06□□□□□ -0.48
RFX1-202ENST00000586913 SERTM2A0A1B0GWG4 89 aa12.05□□□□□ -0.48
RFX1-202ENST00000586913 RGS13O14921 159 aa12.05□□□□□ -0.48
RFX1-202ENST00000586913 CXorf1O96002 111 aa12.05□□□□□ -0.48
RFX1-202ENST00000586913 GCHFRP30047 84 aa12.05□□□□□ -0.48
RFX1-202ENST00000586913 TCL1AP56279 114 aa12.05□□□□□ -0.48
RFX1-202ENST00000586913 Q6AWC8 147 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms