RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 LINC00477Q96M19 166 aa8.38□□□□□ -1.07
LRFN3-202ENST00000585876 TMEM167BQ9NRX6 74 aa8.38□□□□□ -1.07
LRFN3-202ENST00000585876 KLLNB2CW77 178 aa8.37□□□□□ -1.07
LRFN3-202ENST00000585876 CRISP2P16562 243 aa8.37□□□□□ -1.07
LRFN3-202ENST00000585876 LEPP41159 167 aa8.37□□□□□ -1.07
LRFN3-202ENST00000585876 FAM74A1Q5RGS3 127 aa8.37□□□□□ -1.07
LRFN3-202ENST00000585876 DPPA3Q6W0C5 159 aa8.37□□□□□ -1.07
LRFN3-202ENST00000585876 RXFP4Q8TDU9 374 aa8.37□□□□□ -1.07
LRFN3-202ENST00000585876 TMED6Q8WW62 240 aa8.37□□□□□ -1.07
LRFN3-202ENST00000585876 AGPAT4-IT1Q9H0P7 198 aa8.37□□□□□ -1.07
LRFN3-202ENST00000585876 PPP1R14DQ9NXH3 145 aa8.37□□□□□ -1.07
LRFN3-202ENST00000585876 IGKV2-40A0A087WW87 121 aaPredicted RBP8.36□□□□□ -1.07
LRFN3-202ENST00000585876 A0A1W2PRE2 83 aa8.36□□□□□ -1.07
LRFN3-202ENST00000585876 TMEM189A5PLL7 270 aa8.36□□□□□ -1.07
LRFN3-202ENST00000585876 MAP1LC3B2A6NCE7 125 aa8.36□□□□□ -1.07
LRFN3-202ENST00000585876 DIRC3C9JPN6 131 aa8.36□□□□□ -1.07
LRFN3-202ENST00000585876 IGKV2D-40P01614 121 aaPredicted RBP8.36□□□□□ -1.07
LRFN3-202ENST00000585876 PRB4P10163 310 aaPredicted RBP8.36□□□□□ -1.07
LRFN3-202ENST00000585876 CSN1S1P47710 185 aa8.36□□□□□ -1.07
LRFN3-202ENST00000585876 CASC10Q5T4H9 136 aa8.36□□□□□ -1.07
LRFN3-202ENST00000585876 TMEM78Q5T7P6 136 aa8.36□□□□□ -1.07
LRFN3-202ENST00000585876 GFI1BQ5VTD9 330 aa8.36□□□□□ -1.07
LRFN3-202ENST00000585876 SLC51BQ86UW2 128 aa8.36□□□□□ -1.07
LRFN3-202ENST00000585876 MAP1LC3BQ9GZQ8 125 aa8.36□□□□□ -1.07
LRFN3-202ENST00000585876 ZNF492Q9P255 531 aa8.36□□□□□ -1.07
LRFN3-202ENST00000585876 LENEPQ9Y5L5 61 aa8.36□□□□□ -1.07
LRFN3-202ENST00000585876 ARL2-SNX15V9GYD0 113 aa8.36□□□□□ -1.07
LRFN3-202ENST00000585876 PLECQ15149 4684 aaKnown RBP8.36□□□□□ -1.07
LRFN3-202ENST00000585876 DNAH1Q9P2D7 4330 aa8.35□□□□□ -1.07
LRFN3-202ENST00000585876 TRAV12-2A0A075B6T6 113 aa8.35□□□□□ -1.07
LRFN3-202ENST00000585876 SERTM2A0A1B0GWG4 89 aa8.35□□□□□ -1.07
LRFN3-202ENST00000585876 GGTLC3B5MD39 225 aa8.35□□□□□ -1.07
LRFN3-202ENST00000585876 HBE1P02100 147 aa8.35□□□□□ -1.07
LRFN3-202ENST00000585876 FHITP49789 147 aa8.35□□□□□ -1.07
LRFN3-202ENST00000585876 ZNF138P52744 262 aa8.35□□□□□ -1.07
LRFN3-202ENST00000585876 EIF5AL1Q6IS14 154 aaKnown RBP8.35□□□□□ -1.07
LRFN3-202ENST00000585876 C5orf17Q8NAS9 161 aa8.35□□□□□ -1.07
LRFN3-202ENST00000585876 MBD3L1Q8WWY6 194 aa8.35□□□□□ -1.07
LRFN3-202ENST00000585876 VGLL1Q99990 258 aa8.35□□□□□ -1.07
LRFN3-202ENST00000585876 PGPA6NDG6 321 aa8.34□□□□□ -1.07
LRFN3-202ENST00000585876 H7BYZ3 331 aa8.34□□□□□ -1.07
LRFN3-202ENST00000585876 DEFB4AO15263 64 aa8.34□□□□□ -1.07
LRFN3-202ENST00000585876 ERCC8Q13216 396 aa8.34□□□□□ -1.07
LRFN3-202ENST00000585876 KIR3DS1Q14943 382 aa8.34□□□□□ -1.07
LRFN3-202ENST00000585876 ZFAND2AQ8N6M9 145 aa8.34□□□□□ -1.07
LRFN3-202ENST00000585876 CMTM2Q8TAZ6 248 aa8.34□□□□□ -1.07
LRFN3-202ENST00000585876 TMEM208Q9BTX3 173 aa8.34□□□□□ -1.07
LRFN3-202ENST00000585876 ALMS1Q8TCU4 4167 aa8.33□□□□□ -1.08
LRFN3-202ENST00000585876 IGHV3OR16-12A0A075B7B8 117 aa8.33□□□□□ -1.08
LRFN3-202ENST00000585876 TEX48A0A1B0GUV7 120 aa8.33□□□□□ -1.08
LRFN3-202ENST00000585876 LOC102723971A0A1B0GUV8 181 aa8.33□□□□□ -1.08
LRFN3-202ENST00000585876 C7orf71A4D174 169 aa8.33□□□□□ -1.08
LRFN3-202ENST00000585876 RAB5CP51148 216 aa8.33□□□□□ -1.08
LRFN3-202ENST00000585876 TAS2R60P59551 318 aa8.33□□□□□ -1.08
LRFN3-202ENST00000585876 RRN3P1Q2M238 152 aa8.33□□□□□ -1.08
LRFN3-202ENST00000585876 C11orf45Q8TAV5 145 aa8.33□□□□□ -1.08
LRFN3-202ENST00000585876 LINC00467Q9BRT7 94 aa8.33□□□□□ -1.08
LRFN3-202ENST00000585876 NKX6-2Q9C056 277 aaPredicted RBP8.33□□□□□ -1.08
LRFN3-202ENST00000585876 TRAV1-1A0A0B4J248 108 aa8.32□□□□□ -1.08
LRFN3-202ENST00000585876 PLAC8L1A1L4L8 177 aa8.32□□□□□ -1.08
LRFN3-202ENST00000585876 NUPR2A6NF83 97 aa8.32□□□□□ -1.08
LRFN3-202ENST00000585876 FBLL1A6NHQ2 334 aaKnown RBP8.32□□□□□ -1.08
LRFN3-202ENST00000585876 FAM74A7A6NL05 159 aa8.32□□□□□ -1.08
LRFN3-202ENST00000585876 ZNF324O75467 553 aaPredicted RBP8.32□□□□□ -1.08
LRFN3-202ENST00000585876 TCRAP04437 139 aa8.32□□□□□ -1.08
LRFN3-202ENST00000585876 FGF8P55075 233 aaPredicted RBP8.32□□□□□ -1.08
LRFN3-202ENST00000585876 ZNF493Q6ZR52 646 aa8.32□□□□□ -1.08
LRFN3-202ENST00000585876 GOLT1AQ6ZVE7 132 aa8.32□□□□□ -1.08
LRFN3-202ENST00000585876 Q8TAT8 98 aa8.32□□□□□ -1.08
LRFN3-202ENST00000585876 FAM213BQ8TBF2 198 aa8.32□□□□□ -1.08
LRFN3-202ENST00000585876 PYGO2Q9BRQ0 406 aa8.32□□□□□ -1.08
LRFN3-202ENST00000585876 TCEAL7Q9BRU2 100 aa8.32□□□□□ -1.08
LRFN3-202ENST00000585876 TMPRSS5Q9H3S3 457 aa8.32□□□□□ -1.08
LRFN3-202ENST00000585876 CELA1Q9UNI1 258 aa8.32□□□□□ -1.08
LRFN3-202ENST00000585876 YTHDF2Q9Y5A9 579 aaKnown RBP8.32□□□□□ -1.08
LRFN3-202ENST00000585876 SACSQ9NZJ4 4579 aa8.32□□□□□ -1.08
LRFN3-202ENST00000585876 IGLV2-11P01706 119 aa8.31□□□□□ -1.08
LRFN3-202ENST00000585876 SULT1A2P50226 295 aa8.31□□□□□ -1.08
LRFN3-202ENST00000585876 GNG5P63218 68 aa8.31□□□□□ -1.08
LRFN3-202ENST00000585876 PRR9Q5T870 116 aa8.31□□□□□ -1.08
LRFN3-202ENST00000585876 ZFAND6Q6FIF0 208 aa8.31□□□□□ -1.08
LRFN3-202ENST00000585876 ALKAL2Q6UX46 152 aa8.31□□□□□ -1.08
LRFN3-202ENST00000585876 CCDC28AQ8IWP9 274 aa8.31□□□□□ -1.08
LRFN3-202ENST00000585876 IQCF2Q8IXL9 164 aa8.31□□□□□ -1.08
LRFN3-202ENST00000585876 CYB561D1Q8N8Q1 229 aa8.31□□□□□ -1.08
LRFN3-202ENST00000585876 RNASE8Q8TDE3 154 aaKnown RBP8.31□□□□□ -1.08
LRFN3-202ENST00000585876 TMEM263Q8WUH6 116 aaKnown RBP8.31□□□□□ -1.08
LRFN3-202ENST00000585876 C16orf74Q96GX8 76 aa8.31□□□□□ -1.08
LRFN3-202ENST00000585876 NIPSNAP3BQ9BS92 247 aa8.31□□□□□ -1.08
LRFN3-202ENST00000585876 ATG101Q9BSB4 218 aa8.31□□□□□ -1.08
LRFN3-202ENST00000585876 DKK2Q9UBU2 259 aa8.31□□□□□ -1.08
LRFN3-202ENST00000585876 EPDR1Q9UM22 224 aa8.31□□□□□ -1.08
LRFN3-202ENST00000585876 TRAV12-3A0A0B4J271 114 aa8.3□□□□□ -1.08
LRFN3-202ENST00000585876 CXorf65A6NEN9 183 aa8.3□□□□□ -1.08
LRFN3-202ENST00000585876 ZNF705GA8MUZ8 300 aaPredicted RBP8.3□□□□□ -1.08
LRFN3-202ENST00000585876 K7EQM0 130 aa8.3□□□□□ -1.08
LRFN3-202ENST00000585876 GPX1P07203 203 aa8.3□□□□□ -1.08
LRFN3-202ENST00000585876 H2AFB1P0C5Y9 115 aa8.3□□□□□ -1.08
LRFN3-202ENST00000585876 SPART-AS1P0CW21 52 aa8.3□□□□□ -1.08
LRFN3-202ENST00000585876 NANOS2P60321 138 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms