RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 TMEM167BQ9NRX6 74 aa13.5□□□□□ -0.25
ATG4D-203ENST00000585752 UMAD1C9J7I0 102 aa13.49□□□□□ -0.25
ATG4D-203ENST00000585752 GCHFRP30047 84 aa13.49□□□□□ -0.25
ATG4D-203ENST00000585752 TSPOP30536 169 aa13.49□□□□□ -0.25
ATG4D-203ENST00000585752 LGALSLQ3ZCW2 172 aaPredicted RBP13.49□□□□□ -0.25
ATG4D-203ENST00000585752 STOML3Q8TAV4 291 aa13.49□□□□□ -0.25
ATG4D-203ENST00000585752 A8MTW9 85 aa13.48□□□□□ -0.25
ATG4D-203ENST00000585752 PRAC2D3DTV9 90 aa13.48□□□□□ -0.25
ATG4D-203ENST00000585752 M0R2Z0 102 aa13.48□□□□□ -0.25
ATG4D-203ENST00000585752 INSP01308 110 aa13.48□□□□□ -0.25
ATG4D-203ENST00000585752 SPART-AS1P0CW21 52 aa13.48□□□□□ -0.25
ATG4D-203ENST00000585752 EMP1P54849 157 aa13.48□□□□□ -0.25
ATG4D-203ENST00000585752 TMEM78Q5T7P6 136 aa13.48□□□□□ -0.25
ATG4D-203ENST00000585752 RXFP4Q8TDU9 374 aa13.48□□□□□ -0.25
ATG4D-203ENST00000585752 NEU1Q99519 415 aa13.48□□□□□ -0.25
ATG4D-203ENST00000585752 OTORQ9NRC9 128 aa13.48□□□□□ -0.25
ATG4D-203ENST00000585752 DEFB131BA0A096LNP1 70 aa13.47□□□□□ -0.25
ATG4D-203ENST00000585752 PGPA6NDG6 321 aa13.47□□□□□ -0.25
ATG4D-203ENST00000585752 LEPP41159 167 aa13.47□□□□□ -0.25
ATG4D-203ENST00000585752 AMTNQ6UX39 209 aa13.47□□□□□ -0.25
ATG4D-203ENST00000585752 FAM213BQ8TBF2 198 aa13.47□□□□□ -0.25
ATG4D-203ENST00000585752 TMED6Q8WW62 240 aa13.47□□□□□ -0.25
ATG4D-203ENST00000585752 RPH3ALQ9UNE2 315 aa13.47□□□□□ -0.25
ATG4D-203ENST00000585752 IGHV4-4A0A075B6R2 117 aa13.46□□□□□ -0.25
ATG4D-203ENST00000585752 MAP1LC3B2A6NCE7 125 aa13.46□□□□□ -0.25
ATG4D-203ENST00000585752 NPIPB6E9PJ23 425 aa13.46□□□□□ -0.25
ATG4D-203ENST00000585752 HBE1P02100 147 aa13.46□□□□□ -0.25
ATG4D-203ENST00000585752 CDKN1BP46527 198 aa13.46□□□□□ -0.25
ATG4D-203ENST00000585752 CD300CQ08708 224 aa13.46□□□□□ -0.25
ATG4D-203ENST00000585752 ZNF705AQ6ZN79 300 aaPredicted RBP13.46□□□□□ -0.25
ATG4D-203ENST00000585752 ZNF767PQ75MW2 155 aa13.46□□□□□ -0.25
ATG4D-203ENST00000585752 SLC51BQ86UW2 128 aa13.46□□□□□ -0.25
ATG4D-203ENST00000585752 IGF2BP2-AS1Q96M15 143 aa13.46□□□□□ -0.25
ATG4D-203ENST00000585752 LINC00477Q96M19 166 aa13.46□□□□□ -0.25
ATG4D-203ENST00000585752 MAP1LC3BQ9GZQ8 125 aa13.46□□□□□ -0.25
ATG4D-203ENST00000585752 APLNQ9ULZ1 77 aa13.46□□□□□ -0.25
ATG4D-203ENST00000585752 IGKV2-40A0A087WW87 121 aaPredicted RBP13.45□□□□□ -0.26
ATG4D-203ENST00000585752 TEX48A0A1B0GUV7 120 aa13.45□□□□□ -0.26
ATG4D-203ENST00000585752 IGKV2D-40P01614 121 aaPredicted RBP13.45□□□□□ -0.26
ATG4D-203ENST00000585752 DPPA3Q6W0C5 159 aa13.45□□□□□ -0.26
ATG4D-203ENST00000585752 SSX7Q7RTT5 188 aa13.45□□□□□ -0.26
ATG4D-203ENST00000585752 CELA1Q9UNI1 258 aa13.45□□□□□ -0.26
ATG4D-203ENST00000585752 TRAV12-2A0A075B6T6 113 aa13.44□□□□□ -0.26
ATG4D-203ENST00000585752 SLC25A5P05141 298 aaKnown RBP13.44□□□□□ -0.26
ATG4D-203ENST00000585752 FGF8P55075 233 aaPredicted RBP13.44□□□□□ -0.26
ATG4D-203ENST00000585752 ERCC8Q13216 396 aa13.44□□□□□ -0.26
ATG4D-203ENST00000585752 ZNF726P1Q15940 193 aa13.44□□□□□ -0.26
ATG4D-203ENST00000585752 C12orf74Q32Q52 190 aa13.44□□□□□ -0.26
ATG4D-203ENST00000585752 ODF3Q96PU9 254 aa13.44□□□□□ -0.26
ATG4D-203ENST00000585752 NDUFAF3Q9BU61 184 aa13.44□□□□□ -0.26
ATG4D-203ENST00000585752 EPPK1P58107 5090 aaKnown RBP13.43□□□□□ -0.26
ATG4D-203ENST00000585752 J3KRW8 73 aa13.43□□□□□ -0.26
ATG4D-203ENST00000585752 RRN3P1Q2M238 152 aa13.43□□□□□ -0.26
ATG4D-203ENST00000585752 C9orf62Q8N4C0 152 aa13.43□□□□□ -0.26
ATG4D-203ENST00000585752 RBAKDNA6NC62 111 aa13.42□□□□□ -0.26
ATG4D-203ENST00000585752 K7EQM0 130 aa13.42□□□□□ -0.26
ATG4D-203ENST00000585752 CT45A10P0DMU9 189 aa13.42□□□□□ -0.26
ATG4D-203ENST00000585752 RAB5CP51148 216 aa13.42□□□□□ -0.26
ATG4D-203ENST00000585752 C9orf47Q6ZRZ4 202 aa13.42□□□□□ -0.26
ATG4D-203ENST00000585752 TMEM256Q8N2U0 113 aa13.42□□□□□ -0.26
ATG4D-203ENST00000585752 SFT2D1Q8WV19 159 aa13.42□□□□□ -0.26
ATG4D-203ENST00000585752 DIRC3C9JPN6 131 aa13.41□□□□□ -0.26
ATG4D-203ENST00000585752 TEX46H3BTG2 121 aa13.41□□□□□ -0.26
ATG4D-203ENST00000585752 FHITP49789 147 aa13.41□□□□□ -0.26
ATG4D-203ENST00000585752 UBE2G2P60604 165 aa13.41□□□□□ -0.26
ATG4D-203ENST00000585752 ARL6IP6Q8N6S5 226 aa13.41□□□□□ -0.26
ATG4D-203ENST00000585752 C5orf17Q8NAS9 161 aa13.41□□□□□ -0.26
ATG4D-203ENST00000585752 SUN5Q8TC36 379 aa13.41□□□□□ -0.26
ATG4D-203ENST00000585752 LINC01587Q99440 93 aa13.41□□□□□ -0.26
ATG4D-203ENST00000585752 NIPSNAP3BQ9BS92 247 aa13.41□□□□□ -0.26
ATG4D-203ENST00000585752 AGPAT4-IT1Q9H0P7 198 aa13.41□□□□□ -0.26
ATG4D-203ENST00000585752 LOC102723971A0A1B0GUV8 181 aa13.4□□□□□ -0.26
ATG4D-203ENST00000585752 A0A1W2PRE2 83 aa13.4□□□□□ -0.26
ATG4D-203ENST00000585752 IFNA7P01567 189 aa13.4□□□□□ -0.26
ATG4D-203ENST00000585752 H2AFB1P0C5Y9 115 aa13.4□□□□□ -0.26
ATG4D-203ENST00000585752 ZNF138P52744 262 aa13.4□□□□□ -0.26
ATG4D-203ENST00000585752 SUMO1P63165 101 aaKnown RBP13.4□□□□□ -0.26
ATG4D-203ENST00000585752 GOLT1AQ6ZVE7 132 aa13.4□□□□□ -0.26
ATG4D-203ENST00000585752 VGLL1Q99990 258 aa13.4□□□□□ -0.26
ATG4D-203ENST00000585752 NKX6-2Q9C056 277 aaPredicted RBP13.4□□□□□ -0.26
ATG4D-203ENST00000585752 TMPRSS5Q9H3S3 457 aa13.4□□□□□ -0.26
ATG4D-203ENST00000585752 A0A1B0GV50 99 aa13.39□□□□□ -0.27
ATG4D-203ENST00000585752 SERTM2A0A1B0GWG4 89 aa13.39□□□□□ -0.27
ATG4D-203ENST00000585752 CRXO43186 299 aaPredicted RBP13.39□□□□□ -0.27
ATG4D-203ENST00000585752 GPX1P07203 203 aa13.39□□□□□ -0.27
ATG4D-203ENST00000585752 P0DMU3 169 aa13.39□□□□□ -0.27
ATG4D-203ENST00000585752 FAM231AP0DMU4 169 aa13.39□□□□□ -0.27
ATG4D-203ENST00000585752 FAM231CP0DMU5 169 aa13.39□□□□□ -0.27
ATG4D-203ENST00000585752 NKX2-5P52952 324 aaPredicted RBP13.39□□□□□ -0.27
ATG4D-203ENST00000585752 FAM222AQ5U5X8 452 aa13.39□□□□□ -0.27
ATG4D-203ENST00000585752 C1orf158Q8N1D5 194 aa13.39□□□□□ -0.27
ATG4D-203ENST00000585752 C20orf144Q9BQM9 153 aa13.39□□□□□ -0.27
ATG4D-203ENST00000585752 HTN1P15515 57 aa13.38□□□□□ -0.27
ATG4D-203ENST00000585752 HTN3P15516 51 aa13.38□□□□□ -0.27
ATG4D-203ENST00000585752 GNG5P63218 68 aa13.38□□□□□ -0.27
ATG4D-203ENST00000585752 ZNF492Q9P255 531 aa13.38□□□□□ -0.27
ATG4D-203ENST00000585752 DKK2Q9UBU2 259 aa13.38□□□□□ -0.27
ATG4D-203ENST00000585752 H7BYZ3 331 aa13.37□□□□□ -0.27
ATG4D-203ENST00000585752 PPT1P50897 306 aa13.37□□□□□ -0.27
ATG4D-203ENST00000585752 GFI1BQ5VTD9 330 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms