RNA–Protein interactions for RNA: ENST00000585229.1

SMCHD1-212, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-212ENST00000585229 A8MTW9 85 aa7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 ZNF705FA8MVS1 300 aaPredicted RBP7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 KRBOX1C9JBD0 128 aa7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 C9JCJ5 164 aa7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 PRAC2D3DTV9 90 aa7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 IGLV2-11P01706 119 aa7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 CNN1P51911 297 aaKnown RBP7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 TAS2R60P59551 318 aa7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 TMEM183BQ1AE95 376 aa7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 FAM74A3Q4VXF1 159 aa7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 SOHLH1Q5JUK2 328 aa7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 GOLT1AQ6ZVE7 132 aa7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 ZNF738Q8NE65 137 aa7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 FMC1Q96HJ9 113 aa7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 IGF2BP2-AS1Q96M15 143 aa7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 SEC11CQ9BY50 192 aa7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 MAP6D1Q9H9H5 199 aa7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 CARHSP1Q9Y2V2 147 aaKnown RBP7.34□□□□□ -1.23
SMCHD1-212ENST00000585229 SORL1Q92673 2214 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 TRBV20OR9-2A0A075B6H5 130 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 NPIPB6E9PJ23 425 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 K7EQM0 130 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 ZNF688P0C7X2 276 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 IGLL1P15814 213 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 RPL35P42766 123 aaKnown RBP7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 TFPI2P48307 235 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 CMC4P56277 68 aaPredicted RBP7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 GUCA2BQ16661 112 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 ODF3L2Q3SX64 289 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 PSMG4Q5JS54 123 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 FOXI2Q6ZQN5 318 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 C9orf47Q6ZRZ4 202 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 COX8CQ7Z4L0 72 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 Q86TA4 180 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 OR8A1Q8NGG7 326 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 SMIM12Q96EX1 92 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 DERL1Q9BUN8 251 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 LY96Q9Y6Y9 160 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 NOTCH3Q9UM47 2321 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 PKD1L1Q8TDX9 2849 aa7.33□□□□□ -1.24
SMCHD1-212ENST00000585229 IGKV2-40A0A087WW87 121 aaPredicted RBP7.32□□□□□ -1.24
SMCHD1-212ENST00000585229 TRBV7-9A0A0J9YWB2 115 aa7.32□□□□□ -1.24
SMCHD1-212ENST00000585229 A0A0J9YX75 114 aa7.32□□□□□ -1.24
SMCHD1-212ENST00000585229 LTAP01374 205 aa7.32□□□□□ -1.24
SMCHD1-212ENST00000585229 IGKV2D-40P01614 121 aaPredicted RBP7.32□□□□□ -1.24
SMCHD1-212ENST00000585229 DEFB131AP59861 70 aa7.32□□□□□ -1.24
SMCHD1-212ENST00000585229 EGFEM1PQ0D2K5 195 aa7.32□□□□□ -1.24
SMCHD1-212ENST00000585229 LINC00479Q96M42 142 aa7.32□□□□□ -1.24
SMCHD1-212ENST00000585229 LINC00052Q96N35 136 aa7.32□□□□□ -1.24
SMCHD1-212ENST00000585229 SMIM7Q9BQ49 75 aa7.32□□□□□ -1.24
SMCHD1-212ENST00000585229 RPH3ALQ9UNE2 315 aa7.32□□□□□ -1.24
SMCHD1-212ENST00000585229 PSG8Q9UQ74 426 aa7.32□□□□□ -1.24
SMCHD1-212ENST00000585229 LENEPQ9Y5L5 61 aa7.32□□□□□ -1.24
SMCHD1-212ENST00000585229 DNHD1Q96M86 4753 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 TRAV8-1A0A0A6YYK1 113 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 TRAV34A0A0B4J273 112 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 ZNF727A8MUV8 499 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 F8W036 122 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 ATP6V1G1O75348 118 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 DUSP14O95147 198 aaKnown RBP7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 IGLV2-8P01709 118 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 HLA-DRB4P13762 266 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 UBE2G1P62253 170 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 FLI1Q01543 452 aaPredicted RBP7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 CENPWQ5EE01 88 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 FAM19A4Q96LR4 140 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 LINC00477Q96M19 166 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 ODF3Q96PU9 254 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 VGLL1Q99990 258 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 MLST8Q9BVC4 326 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 AGPAT4-IT1Q9H0P7 198 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 SAV1Q9H4B6 383 aaPredicted RBP7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 ZNF492Q9P255 531 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 ZFP30Q9Y2G7 519 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 HLA-DRB4X5D2U9 266 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 AGRNO00468 2067 aa7.31□□□□□ -1.24
SMCHD1-212ENST00000585229 OR11H12B2RN74 326 aa7.3□□□□□ -1.24
SMCHD1-212ENST00000585229 F6UB75 175 aa7.3□□□□□ -1.24
SMCHD1-212ENST00000585229 ZNF138P52744 262 aa7.3□□□□□ -1.24
SMCHD1-212ENST00000585229 CEBPGP53567 150 aa7.3□□□□□ -1.24
SMCHD1-212ENST00000585229 DEFB1P60022 68 aa7.3□□□□□ -1.24
SMCHD1-212ENST00000585229 ERCC8Q13216 396 aa7.3□□□□□ -1.24
SMCHD1-212ENST00000585229 ZNF674Q2M3X9 581 aa7.3□□□□□ -1.24
SMCHD1-212ENST00000585229 OR10J6PQ8NGY7 276 aa7.3□□□□□ -1.24
SMCHD1-212ENST00000585229 TVP23CQ96ET8 276 aa7.3□□□□□ -1.24
SMCHD1-212ENST00000585229 NIPSNAP3BQ9BS92 247 aa7.3□□□□□ -1.24
SMCHD1-212ENST00000585229 SDF2L1Q9HCN8 221 aa7.3□□□□□ -1.24
SMCHD1-212ENST00000585229 NAT8Q9UHE5 227 aa7.3□□□□□ -1.24
SMCHD1-212ENST00000585229 H3BMM0 161 aa7.29□□□□□ -1.24
SMCHD1-212ENST00000585229 CD7P09564 240 aa7.29□□□□□ -1.24
SMCHD1-212ENST00000585229 CT45A10P0DMU9 189 aa7.29□□□□□ -1.24
SMCHD1-212ENST00000585229 CRISP2P16562 243 aa7.29□□□□□ -1.24
SMCHD1-212ENST00000585229 S100A1P23297 94 aa7.29□□□□□ -1.24
SMCHD1-212ENST00000585229 GNG4P50150 75 aa7.29□□□□□ -1.24
SMCHD1-212ENST00000585229 RPL23P62829 140 aaKnown RBP7.29□□□□□ -1.24
SMCHD1-212ENST00000585229 HIST1H1AQ02539 215 aaPredicted RBP7.29□□□□□ -1.24
SMCHD1-212ENST00000585229 PNRC1Q12796 327 aaPredicted RBP7.29□□□□□ -1.24
SMCHD1-212ENST00000585229 TMEM241Q24JQ0 296 aa7.29□□□□□ -1.24
SMCHD1-212ENST00000585229 SAPCD1Q5SSQ6 148 aa7.29□□□□□ -1.24
SMCHD1-212ENST00000585229 TMEM78Q5T7P6 136 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms