RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 RPL7L1Q6DKI1 246 aaKnown RBP12.08□□□□□ -0.48
ITGB4-213ENST00000584939 LINC00336Q6ZUF6 198 aa12.08□□□□□ -0.48
ITGB4-213ENST00000584939 C15orf53Q8NAA6 179 aa12.08□□□□□ -0.48
ITGB4-213ENST00000584939 OR11H4Q8NGC9 324 aa12.08□□□□□ -0.48
ITGB4-213ENST00000584939 RNASE8Q8TDE3 154 aaKnown RBP12.08□□□□□ -0.48
ITGB4-213ENST00000584939 TMEM263Q8WUH6 116 aaKnown RBP12.08□□□□□ -0.48
ITGB4-213ENST00000584939 RNF141Q8WVD5 230 aa12.08□□□□□ -0.48
ITGB4-213ENST00000584939 MRPL53Q96EL3 112 aaKnown RBP12.08□□□□□ -0.48
ITGB4-213ENST00000584939 PHYHIPLQ96FC7 376 aa12.08□□□□□ -0.48
ITGB4-213ENST00000584939 SH3BGRL3Q9H299 93 aa12.08□□□□□ -0.48
ITGB4-213ENST00000584939 DNAH10Q8IVF4 4471 aa12.07□□□□□ -0.48
ITGB4-213ENST00000584939 NPIPB6E9PJ23 425 aa12.07□□□□□ -0.48
ITGB4-213ENST00000584939 J3KRW8 73 aa12.07□□□□□ -0.48
ITGB4-213ENST00000584939 LEPP41159 167 aa12.07□□□□□ -0.48
ITGB4-213ENST00000584939 LGALS9BQ3B8N2 356 aa12.07□□□□□ -0.48
ITGB4-213ENST00000584939 CCDC28AQ8IWP9 274 aa12.07□□□□□ -0.48
ITGB4-213ENST00000584939 ODF3Q96PU9 254 aa12.07□□□□□ -0.48
ITGB4-213ENST00000584939 PSMG3Q9BT73 122 aaPredicted RBP12.07□□□□□ -0.48
ITGB4-213ENST00000584939 NOP10Q9NPE3 64 aaKnown RBP12.07□□□□□ -0.48
ITGB4-213ENST00000584939 CYTL1Q9NRR1 136 aa12.07□□□□□ -0.48
ITGB4-213ENST00000584939 IGLV2-18A0A075B6J9 118 aa12.06□□□□□ -0.48
ITGB4-213ENST00000584939 ATP5G1P05496 136 aa12.06□□□□□ -0.48
ITGB4-213ENST00000584939 ATP5G3P48201 142 aa12.06□□□□□ -0.48
ITGB4-213ENST00000584939 ACOT6Q3I5F7 207 aaPredicted RBP12.06□□□□□ -0.48
ITGB4-213ENST00000584939 INO80EQ8NBZ0 244 aaPredicted RBP12.06□□□□□ -0.48
ITGB4-213ENST00000584939 TRAV12-3A0A0B4J271 114 aa12.05□□□□□ -0.48
ITGB4-213ENST00000584939 OR7C2O60412 319 aa12.05□□□□□ -0.48
ITGB4-213ENST00000584939 ERCC8Q13216 396 aa12.05□□□□□ -0.48
ITGB4-213ENST00000584939 ICAM4Q14773 271 aa12.05□□□□□ -0.48
ITGB4-213ENST00000584939 OR10G4Q8NGN3 311 aa12.05□□□□□ -0.48
ITGB4-213ENST00000584939 OR10G9Q8NGN4 311 aa12.05□□□□□ -0.48
ITGB4-213ENST00000584939 OR10G7Q8NGN6 311 aa12.05□□□□□ -0.48
ITGB4-213ENST00000584939 FAM19A4Q96LR4 140 aa12.05□□□□□ -0.48
ITGB4-213ENST00000584939 PRELID1Q9Y255 219 aa12.05□□□□□ -0.48
ITGB4-213ENST00000584939 RTL8CO15255 209 aa12.04□□□□□ -0.48
ITGB4-213ENST00000584939 ARPC5O15511 151 aa12.04□□□□□ -0.48
ITGB4-213ENST00000584939 KHDC3LQ587J8 217 aa12.04□□□□□ -0.48
ITGB4-213ENST00000584939 FAM122CQ6P4D5 195 aa12.04□□□□□ -0.48
ITGB4-213ENST00000584939 Q6ZNX1 250 aa12.04□□□□□ -0.48
ITGB4-213ENST00000584939 SSX7Q7RTT5 188 aa12.04□□□□□ -0.48
ITGB4-213ENST00000584939 AGPAT4-IT1Q9H0P7 198 aa12.04□□□□□ -0.48
ITGB4-213ENST00000584939 HMGB3O15347 200 aaKnown RBP12.03□□□□□ -0.48
ITGB4-213ENST00000584939 NUDT3O95989 172 aa12.03□□□□□ -0.48
ITGB4-213ENST00000584939 UBE2L3P68036 154 aaKnown RBP12.03□□□□□ -0.48
ITGB4-213ENST00000584939 SERF2P84101 59 aa12.03□□□□□ -0.48
ITGB4-213ENST00000584939 Q6ZR54 194 aa12.03□□□□□ -0.48
ITGB4-213ENST00000584939 ST6GAL2Q96JF0 529 aa12.03□□□□□ -0.48
ITGB4-213ENST00000584939 LINC00477Q96M19 166 aa12.03□□□□□ -0.48
ITGB4-213ENST00000584939 ATG101Q9BSB4 218 aa12.03□□□□□ -0.48
ITGB4-213ENST00000584939 AAMDCQ9H7C9 122 aa12.03□□□□□ -0.48
ITGB4-213ENST00000584939 IGKV2-40A0A087WW87 121 aaPredicted RBP12.02□□□□□ -0.49
ITGB4-213ENST00000584939 PRSS29PA6NIE9 313 aa12.02□□□□□ -0.49
ITGB4-213ENST00000584939 IGKV2D-40P01614 121 aaPredicted RBP12.02□□□□□ -0.49
ITGB4-213ENST00000584939 SLC25A5P05141 298 aaKnown RBP12.02□□□□□ -0.49
ITGB4-213ENST00000584939 STAG3L2P0CL84 134 aa12.02□□□□□ -0.49
ITGB4-213ENST00000584939 STAG3L3P0CL85 134 aa12.02□□□□□ -0.49
ITGB4-213ENST00000584939 FAM3BP58499 235 aaPredicted RBP12.02□□□□□ -0.49
ITGB4-213ENST00000584939 TAS2R45P59539 299 aa12.02□□□□□ -0.49
ITGB4-213ENST00000584939 SUN5Q8TC36 379 aa12.02□□□□□ -0.49
ITGB4-213ENST00000584939 RAB24Q969Q5 203 aa12.02□□□□□ -0.49
ITGB4-213ENST00000584939 VGLL1Q99990 258 aa12.02□□□□□ -0.49
ITGB4-213ENST00000584939 PYGO2Q9BRQ0 406 aa12.02□□□□□ -0.49
ITGB4-213ENST00000584939 Q9H3A6 140 aa12.02□□□□□ -0.49
ITGB4-213ENST00000584939 C7orf71A4D174 169 aa12.01□□□□□ -0.49
ITGB4-213ENST00000584939 HMSDA8MTL9 139 aa12.01□□□□□ -0.49
ITGB4-213ENST00000584939 SNURFLB1AK76 121 aa12.01□□□□□ -0.49
ITGB4-213ENST00000584939 CDC34P49427 236 aaPredicted RBP12.01□□□□□ -0.49
ITGB4-213ENST00000584939 RANP62826 216 aaKnown RBP12.01□□□□□ -0.49
ITGB4-213ENST00000584939 ZNF726P1Q15940 193 aa12.01□□□□□ -0.49
ITGB4-213ENST00000584939 PQLC2Q6ZP29 291 aa12.01□□□□□ -0.49
ITGB4-213ENST00000584939 C9orf47Q6ZRZ4 202 aa12.01□□□□□ -0.49
ITGB4-213ENST00000584939 LYPD1Q8N2G4 141 aa12.01□□□□□ -0.49
ITGB4-213ENST00000584939 KCNRGQ8N5I3 272 aa12.01□□□□□ -0.49
ITGB4-213ENST00000584939 LINC00612Q8N6U2 182 aa12.01□□□□□ -0.49
ITGB4-213ENST00000584939 BORCS7-ASMTA0A0B4J1R7 106 aa12□□□□□ -0.49
ITGB4-213ENST00000584939 A0A1B0GVY2 172 aa12□□□□□ -0.49
ITGB4-213ENST00000584939 A0A1W2PPV4 95 aa12□□□□□ -0.49
ITGB4-213ENST00000584939 GAGE12BA1L429 117 aa12□□□□□ -0.49
ITGB4-213ENST00000584939 GAGE7O76087 117 aa12□□□□□ -0.49
ITGB4-213ENST00000584939 GAGE12FP0CL80 117 aa12□□□□□ -0.49
ITGB4-213ENST00000584939 GAGE12GP0CL81 117 aa12□□□□□ -0.49
ITGB4-213ENST00000584939 GAGE12IP0CL82 117 aa12□□□□□ -0.49
ITGB4-213ENST00000584939 ARL14EPLP0DKL9 152 aa12□□□□□ -0.49
ITGB4-213ENST00000584939 ZNF345Q14585 488 aa12□□□□□ -0.49
ITGB4-213ENST00000584939 GNPNAT1Q96EK6 184 aaPredicted RBP12□□□□□ -0.49
ITGB4-213ENST00000584939 KLLNB2CW77 178 aa11.99□□□□□ -0.49
ITGB4-213ENST00000584939 TAAR5O14804 337 aa11.99□□□□□ -0.49
ITGB4-213ENST00000584939 RNASE4P34096 147 aaKnown RBP11.99□□□□□ -0.49
ITGB4-213ENST00000584939 CD300CQ08708 224 aa11.99□□□□□ -0.49
ITGB4-213ENST00000584939 OR5I1Q13606 314 aa11.99□□□□□ -0.49
ITGB4-213ENST00000584939 PRR9Q5T870 116 aa11.99□□□□□ -0.49
ITGB4-213ENST00000584939 ZNF324O75467 553 aaPredicted RBP11.98□□□□□ -0.49
ITGB4-213ENST00000584939 GPX1P07203 203 aa11.98□□□□□ -0.49
ITGB4-213ENST00000584939 CRISP2P16562 243 aa11.98□□□□□ -0.49
ITGB4-213ENST00000584939 CCL18P55774 89 aa11.98□□□□□ -0.49
ITGB4-213ENST00000584939 BTN1A1Q13410 526 aa11.98□□□□□ -0.49
ITGB4-213ENST00000584939 TMEM78Q5T7P6 136 aa11.98□□□□□ -0.49
ITGB4-213ENST00000584939 ZFAND2AQ8N6M9 145 aa11.98□□□□□ -0.49
ITGB4-213ENST00000584939 DIRC3C9JPN6 131 aa11.97□□□□□ -0.49
ITGB4-213ENST00000584939 MBP02144 154 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms