RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 RANP62826 216 aaKnown RBP9.43□□□□□ -0.9
CDK5RAP3-234ENST00000584525 EIF5AP63241 154 aaKnown RBP9.43□□□□□ -0.9
CDK5RAP3-234ENST00000584525 FXYD5Q96DB9 178 aa9.43□□□□□ -0.9
CDK5RAP3-234ENST00000584525 FAM167A-AS1Q96KT0 104 aa9.43□□□□□ -0.9
CDK5RAP3-234ENST00000584525 RPH3ALQ9UNE2 315 aa9.43□□□□□ -0.9
CDK5RAP3-234ENST00000584525 TRAV12-2A0A075B6T6 113 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 HMSDA8MTL9 139 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 M0R2N4 97 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 M0R3E3 92 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 ZNF345Q14585 488 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 ZNF767PQ75MW2 155 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 BAP18Q8IXM2 172 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 LYPD1Q8N2G4 141 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 TMEM256Q8N2U0 113 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 CSNK1G2-AS1Q8NCQ2 148 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 RXFP4Q8TDU9 374 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 PHYHIPLQ96FC7 376 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 HYLS1Q96M11 299 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 LINC01587Q99440 93 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 ZNF471Q9BX82 626 aaPredicted RBP9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 SH3BGRL3Q9H299 93 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 Q9H3A6 140 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 X6R8D5 127 aa9.42□□□□□ -0.9
CDK5RAP3-234ENST00000584525 DEFB131BA0A096LNP1 70 aa9.41□□□□□ -0.9
CDK5RAP3-234ENST00000584525 TEX48A0A1B0GUV7 120 aa9.41□□□□□ -0.9
CDK5RAP3-234ENST00000584525 LOC102723971A0A1B0GUV8 181 aa9.41□□□□□ -0.9
CDK5RAP3-234ENST00000584525 PRAC2D3DTV9 90 aa9.41□□□□□ -0.9
CDK5RAP3-234ENST00000584525 EIF3GO75821 320 aaKnown RBP eCLIP9.41□□□□□ -0.9
CDK5RAP3-234ENST00000584525 P0DMU3 169 aa9.41□□□□□ -0.9
CDK5RAP3-234ENST00000584525 FAM231AP0DMU4 169 aa9.41□□□□□ -0.9
CDK5RAP3-234ENST00000584525 FAM231CP0DMU5 169 aa9.41□□□□□ -0.9
CDK5RAP3-234ENST00000584525 HTN1P15515 57 aa9.41□□□□□ -0.9
CDK5RAP3-234ENST00000584525 AMTNQ6UX39 209 aa9.41□□□□□ -0.9
CDK5RAP3-234ENST00000584525 KCNRGQ8N5I3 272 aa9.41□□□□□ -0.9
CDK5RAP3-234ENST00000584525 POM121L12Q8N7R1 296 aa9.41□□□□□ -0.9
CDK5RAP3-234ENST00000584525 NEU1Q99519 415 aa9.41□□□□□ -0.9
CDK5RAP3-234ENST00000584525 NIPSNAP3BQ9BS92 247 aa9.41□□□□□ -0.9
CDK5RAP3-234ENST00000584525 TMEM167BQ9NRX6 74 aa9.41□□□□□ -0.9
CDK5RAP3-234ENST00000584525 A8MTW9 85 aa9.4□□□□□ -0.9
CDK5RAP3-234ENST00000584525 NPIPB6E9PJ23 425 aa9.4□□□□□ -0.9
CDK5RAP3-234ENST00000584525 BCL2L11O43521 198 aa9.4□□□□□ -0.9
CDK5RAP3-234ENST00000584525 NDUFB4O95168 129 aa9.4□□□□□ -0.9
CDK5RAP3-234ENST00000584525 CXorf1O96002 111 aa9.4□□□□□ -0.9
CDK5RAP3-234ENST00000584525 ARL14EPLP0DKL9 152 aa9.4□□□□□ -0.9
CDK5RAP3-234ENST00000584525 C12orf74Q32Q52 190 aa9.4□□□□□ -0.9
CDK5RAP3-234ENST00000584525 ZNF705AQ6ZN79 300 aaPredicted RBP9.4□□□□□ -0.9
CDK5RAP3-234ENST00000584525 AKAP14Q86UN6 197 aa9.4□□□□□ -0.9
CDK5RAP3-234ENST00000584525 CCDC28AQ8IWP9 274 aa9.4□□□□□ -0.9
CDK5RAP3-234ENST00000584525 RAB24Q969Q5 203 aa9.4□□□□□ -0.9
CDK5RAP3-234ENST00000584525 LINC00477Q96M19 166 aa9.4□□□□□ -0.9
CDK5RAP3-234ENST00000584525 OTORQ9NRC9 128 aa9.4□□□□□ -0.9
CDK5RAP3-234ENST00000584525 IGKV2-40A0A087WW87 121 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP3-234ENST00000584525 CTXND1A0A1B0GTU2 59 aa9.39□□□□□ -0.91
CDK5RAP3-234ENST00000584525 PGPA6NDG6 321 aa9.39□□□□□ -0.91
CDK5RAP3-234ENST00000584525 G3V3Q6 166 aa9.39□□□□□ -0.91
CDK5RAP3-234ENST00000584525 RTL8CO15255 209 aa9.39□□□□□ -0.91
CDK5RAP3-234ENST00000584525 IGKV2D-40P01614 121 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP3-234ENST00000584525 STAG3L2P0CL84 134 aa9.39□□□□□ -0.91
CDK5RAP3-234ENST00000584525 STAG3L3P0CL85 134 aa9.39□□□□□ -0.91
CDK5RAP3-234ENST00000584525 SPART-AS1P0CW21 52 aa9.39□□□□□ -0.91
CDK5RAP3-234ENST00000584525 STOML3Q8TAV4 291 aa9.39□□□□□ -0.91
CDK5RAP3-234ENST00000584525 ODF3Q96PU9 254 aa9.39□□□□□ -0.91
CDK5RAP3-234ENST00000584525 C20orf144Q9BQM9 153 aa9.39□□□□□ -0.91
CDK5RAP3-234ENST00000584525 NDUFAF3Q9BU61 184 aa9.39□□□□□ -0.91
CDK5RAP3-234ENST00000584525 CELA1Q9UNI1 258 aa9.39□□□□□ -0.91
CDK5RAP3-234ENST00000584525 H7BYZ3 331 aa9.38□□□□□ -0.91
CDK5RAP3-234ENST00000584525 K7EQM0 130 aa9.38□□□□□ -0.91
CDK5RAP3-234ENST00000584525 SLC25A5P05141 298 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-234ENST00000584525 GPX1P07203 203 aa9.38□□□□□ -0.91
CDK5RAP3-234ENST00000584525 TPT1P13693 172 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-234ENST00000584525 ERCC8Q13216 396 aa9.38□□□□□ -0.91
CDK5RAP3-234ENST00000584525 DMRTA1Q5VZB9 504 aa9.38□□□□□ -0.91
CDK5RAP3-234ENST00000584525 Q6ZNX1 250 aa9.38□□□□□ -0.91
CDK5RAP3-234ENST00000584525 C1orf158Q8N1D5 194 aa9.38□□□□□ -0.91
CDK5RAP3-234ENST00000584525 ZNF503Q96F45 646 aa9.38□□□□□ -0.91
CDK5RAP3-234ENST00000584525 PKD1P98161 4303 aa9.37□□□□□ -0.91
CDK5RAP3-234ENST00000584525 ZNF705GA8MUZ8 300 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-234ENST00000584525 CT45A10P0DMU9 189 aa9.37□□□□□ -0.91
CDK5RAP3-234ENST00000584525 GCHFRP30047 84 aa9.37□□□□□ -0.91
CDK5RAP3-234ENST00000584525 ZNF138P52744 262 aa9.37□□□□□ -0.91
CDK5RAP3-234ENST00000584525 TAS2R60P59551 318 aa9.37□□□□□ -0.91
CDK5RAP3-234ENST00000584525 GFI1BQ5VTD9 330 aa9.37□□□□□ -0.91
CDK5RAP3-234ENST00000584525 TCTE3Q8IZS6 198 aa9.37□□□□□ -0.91
CDK5RAP3-234ENST00000584525 NDFIP1Q9BT67 221 aa9.37□□□□□ -0.91
CDK5RAP3-234ENST00000584525 TRAV12-3A0A0B4J271 114 aa9.36□□□□□ -0.91
CDK5RAP3-234ENST00000584525 CRXO43186 299 aaPredicted RBP9.36□□□□□ -0.91
CDK5RAP3-234ENST00000584525 LGALS9BQ3B8N2 356 aa9.36□□□□□ -0.91
CDK5RAP3-234ENST00000584525 EIF5AL1Q6IS14 154 aaKnown RBP9.36□□□□□ -0.91
CDK5RAP3-234ENST00000584525 C9orf47Q6ZRZ4 202 aa9.36□□□□□ -0.91
CDK5RAP3-234ENST00000584525 TMUB2Q71RG4 321 aa9.36□□□□□ -0.91
CDK5RAP3-234ENST00000584525 OR11H4Q8NGC9 324 aa9.36□□□□□ -0.91
CDK5RAP3-234ENST00000584525 C16orf74Q96GX8 76 aa9.36□□□□□ -0.91
CDK5RAP3-234ENST00000584525 AGPAT4-IT1Q9H0P7 198 aa9.36□□□□□ -0.91
CDK5RAP3-234ENST00000584525 CYTL1Q9NRR1 136 aa9.36□□□□□ -0.91
CDK5RAP3-234ENST00000584525 YTHDF2Q9Y5A9 579 aaKnown RBP9.36□□□□□ -0.91
CDK5RAP3-234ENST00000584525 IGLV2-18A0A075B6J9 118 aa9.35□□□□□ -0.91
CDK5RAP3-234ENST00000584525 C7orf71A4D174 169 aa9.35□□□□□ -0.91
CDK5RAP3-234ENST00000584525 RBAKDNA6NC62 111 aa9.35□□□□□ -0.91
CDK5RAP3-234ENST00000584525 MAP1LC3B2A6NCE7 125 aa9.35□□□□□ -0.91
CDK5RAP3-234ENST00000584525 SNURFLB1AK76 121 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms