RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 S100A7AQ86SG5 101 aa3.69□□□□□ -1.82
VAPA-207ENST00000583879 OR4C16Q8NGL9 310 aa3.69□□□□□ -1.82
VAPA-207ENST00000583879 OR13C8Q8NGS7 320 aa3.69□□□□□ -1.82
VAPA-207ENST00000583879 STOML3Q8TAV4 291 aa3.69□□□□□ -1.82
VAPA-207ENST00000583879 RBPMSQ93062 196 aaKnown RBP3.69□□□□□ -1.82
VAPA-207ENST00000583879 UHRF2Q96PU4 802 aa3.69□□□□□ -1.82
VAPA-207ENST00000583879 PFDN5Q99471 154 aa3.69□□□□□ -1.82
VAPA-207ENST00000583879 TCEAL7Q9BRU2 100 aa3.69□□□□□ -1.82
VAPA-207ENST00000583879 KRTAP1-5Q9BYS1 174 aa3.69□□□□□ -1.82
VAPA-207ENST00000583879 TMEM222Q9H0R3 208 aa3.69□□□□□ -1.82
VAPA-207ENST00000583879 Q9H3A6 140 aa3.69□□□□□ -1.82
VAPA-207ENST00000583879 COMMD3Q9UBI1 195 aa3.69□□□□□ -1.82
VAPA-207ENST00000583879 CACNG5Q9UF02 275 aa3.69□□□□□ -1.82
VAPA-207ENST00000583879 DISC1C4P0D8 188 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 GABARAPH6UMI1 98 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 M0R2Z0 102 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 HSBP1O75506 76 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 GABARAPO95166 117 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 TNFAIP8O95379 198 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 INSP01308 110 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 S100A8P05109 93 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 TBPP20226 339 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 GALR1P47211 349 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 LYZP61626 148 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 LSM3P62310 102 aaKnown RBP3.68□□□□□ -1.82
VAPA-207ENST00000583879 OR5I1Q13606 314 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 OR2F1Q13607 317 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 MEF2DQ14814 521 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 SCGB2B2Q4G0G5 96 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 LINC01620Q4KN68 170 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 TMEM268Q5VZI3 342 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 Q6ZNX1 250 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 LGI3Q8N145 548 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 OR11H7Q8NGC8 314 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 RXFP4Q8TDU9 374 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 GNPNAT1Q96EK6 184 aaPredicted RBP3.68□□□□□ -1.82
VAPA-207ENST00000583879 SGK494Q96LW2 274 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 C17orf77Q96MU5 243 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 LINC01587Q99440 93 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 RTBDNQ9BSG5 229 aaPredicted RBP3.68□□□□□ -1.82
VAPA-207ENST00000583879 UPK3BQ9BT76 320 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 Q9H521 79 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 MTFP1Q9UDX5 166 aa3.68□□□□□ -1.82
VAPA-207ENST00000583879 TIMM8BQ9Y5J9 83 aaPredicted RBP3.68□□□□□ -1.82
VAPA-207ENST00000583879 TRAV12-2A0A075B6T6 113 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 B5MCH6 92 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 TSTD3H0UI37 97 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 H3BNG1 76 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 HPGDSO60760 199 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 CFDP00746 253 aaPredicted RBP3.67□□□□□ -1.82
VAPA-207ENST00000583879 SULT1A3P0DMM9 295 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 SULT1A4P0DMN0 295 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 HTN1P15515 57 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 CCR6P51684 374 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 CRYBA4P53673 196 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 PDZD11Q5EBL8 140 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 RNASE12Q5GAN4 147 aaKnown RBP3.67□□□□□ -1.82
VAPA-207ENST00000583879 Q5VSD8 79 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 GGNBP1Q5YKI7 109 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 ZNF493Q6ZR52 646 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 Q6ZRN7 208 aaPredicted RBP3.67□□□□□ -1.82
VAPA-207ENST00000583879 TMEM144Q7Z5S9 345 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 BAP18Q8IXM2 172 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 TMEM256Q8N2U0 113 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 TMEM229BQ8NBD8 167 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 OR4D5Q8NGN0 318 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 OR1B1Q8NGR6 318 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 OR52I2Q8NH67 350 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 FRZBQ92765 325 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 IL22RA2Q969J5 263 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 YIPF6Q96EC8 236 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 SMIM12Q96EX1 92 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 C16orf74Q96GX8 76 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 SLC35E1Q96K37 410 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 TRGV9Q99603 122 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 RBKSQ9H477 322 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 NAA60Q9H7X0 242 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 SLC25A22Q9H936 323 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 DNAJC4Q9NNZ3 241 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 NOP10Q9NPE3 64 aaKnown RBP3.67□□□□□ -1.82
VAPA-207ENST00000583879 ZNF586Q9NXT0 402 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 C14orf166Q9Y224 244 aaKnown RBP3.67□□□□□ -1.82
VAPA-207ENST00000583879 KCNIP3Q9Y2W7 256 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 TMEM56-RWDD3S4R434 201 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 NACAE9PAV3 2078 aa3.67□□□□□ -1.82
VAPA-207ENST00000583879 IGKV1OR2-108A0A075B7D4 117 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 TRAV8-2A0A0B4J237 113 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 A0A0J9YY99 117 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 CRYM-AS1A6NIL9 109 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 FAM25AB3EWG3 89 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 FAM25CB3EWG5 89 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 FAM25GB3EWG6 89 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 ORM1P02763 201 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 S100A7P31151 101 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 FUSP35637 526 aaKnown RBP eCLIP3.66□□□□□ -1.82
VAPA-207ENST00000583879 LINC00315P59091 139 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 TAS2R19P59542 299 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 RHOBP62745 196 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 RANP62826 216 aaKnown RBP3.66□□□□□ -1.82
VAPA-207ENST00000583879 ASAH1Q13510 395 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms