RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 RAB5CP51148 216 aa6.18□□□□□ -1.42
CDK5RAP3-229ENST00000583697 HIST1H1AQ02539 215 aaPredicted RBP6.18□□□□□ -1.42
CDK5RAP3-229ENST00000583697 AMTNQ6UX39 209 aa6.18□□□□□ -1.42
CDK5RAP3-229ENST00000583697 RNF182Q8N6D2 247 aa6.18□□□□□ -1.42
CDK5RAP3-229ENST00000583697 LRRC20Q8TCA0 184 aa6.18□□□□□ -1.42
CDK5RAP3-229ENST00000583697 PHYHIPLQ96FC7 376 aa6.18□□□□□ -1.42
CDK5RAP3-229ENST00000583697 MRPL32Q9BYC8 188 aaKnown RBP6.18□□□□□ -1.42
CDK5RAP3-229ENST00000583697 PLA2G2EQ9NZK7 142 aa6.18□□□□□ -1.42
CDK5RAP3-229ENST00000583697 FUT9Q9Y231 359 aa6.18□□□□□ -1.42
CDK5RAP3-229ENST00000583697 PKD1P98161 4303 aa6.18□□□□□ -1.42
CDK5RAP3-229ENST00000583697 TRAV12-2A0A075B6T6 113 aa6.17□□□□□ -1.42
CDK5RAP3-229ENST00000583697 TRAV5A0A0B4J249 113 aa6.17□□□□□ -1.42
CDK5RAP3-229ENST00000583697 ZNF705GA8MUZ8 300 aaPredicted RBP6.17□□□□□ -1.42
CDK5RAP3-229ENST00000583697 IFNA7P01567 189 aa6.17□□□□□ -1.42
CDK5RAP3-229ENST00000583697 TSPOP30536 169 aa6.17□□□□□ -1.42
CDK5RAP3-229ENST00000583697 CDC34P49427 236 aaPredicted RBP6.17□□□□□ -1.42
CDK5RAP3-229ENST00000583697 RAB2AP61019 212 aa6.17□□□□□ -1.42
CDK5RAP3-229ENST00000583697 IGFL4Q6B9Z1 124 aa6.17□□□□□ -1.42
CDK5RAP3-229ENST00000583697 ALKAL2Q6UX46 152 aa6.17□□□□□ -1.42
CDK5RAP3-229ENST00000583697 DPPA3Q6W0C5 159 aa6.17□□□□□ -1.42
CDK5RAP3-229ENST00000583697 MIR17HGQ75NE6 70 aa6.17□□□□□ -1.42
CDK5RAP3-229ENST00000583697 RNF141Q8WVD5 230 aa6.17□□□□□ -1.42
CDK5RAP3-229ENST00000583697 RAB24Q969Q5 203 aa6.17□□□□□ -1.42
CDK5RAP3-229ENST00000583697 OR51M1Q9H341 326 aa6.17□□□□□ -1.42
CDK5RAP3-229ENST00000583697 A0A087X0K7 114 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 TRAV8-2A0A0B4J237 113 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 TEX46H3BTG2 121 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 HMGB3O15347 200 aaKnown RBP6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 CRXO43186 299 aaPredicted RBP6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 OR7C2O60412 319 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 ATP5G1P05496 136 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 H2AFB1P0C5Y9 115 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 DEFB130BP0DP73 79 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 DEFB130AP0DP74 79 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 ATP5G3P48201 142 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 SULT1A2P50226 295 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 FAM3BP58499 235 aaPredicted RBP6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 BLOC1S1P78537 153 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 KHDC3LQ587J8 217 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 C1orf134Q5TEV5 83 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 LCN15Q6UWW0 184 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 PQLC2Q6ZP29 291 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 TMEM256Q8N2U0 113 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 OR8A1Q8NGG7 326 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 FAM213BQ8TBF2 198 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 SFT2D1Q8WV19 159 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 C16orf74Q96GX8 76 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 PAXXQ9BUH6 204 aa6.16□□□□□ -1.42
CDK5RAP3-229ENST00000583697 CTXND1A0A1B0GTU2 59 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 F5H768 121 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 NUDT3O95989 172 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 CXorf1O96002 111 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 NBEAP1P0C6P0 100 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 HIST1H1EP10412 219 aaKnown RBP6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 HTN1P15515 57 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 CDKN1BP46527 198 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 GUK1Q16774 197 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 MORN5Q5VZ52 161 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 TEX261Q6UWH6 196 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 Q6ZR54 194 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 IQCF2Q8IXL9 164 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 C17orf77Q96MU5 243 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 LINC01587Q99440 93 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 SLC50A1Q9BRV3 221 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 TMEM14CQ9P0S9 112 aa6.15□□□□□ -1.42
CDK5RAP3-229ENST00000583697 NACAE9PAV3 2078 aa6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 EIF3GO75821 320 aaKnown RBP eCLIP6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 SNRPCP09234 159 aaKnown RBP6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 STAG3L2P0CL84 134 aa6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 STAG3L3P0CL85 134 aa6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 FHITP49789 147 aa6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 CCL18P55774 89 aa6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 TAS2R60P59551 318 aa6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 RAB14P61106 215 aa6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 PSG3Q16557 428 aa6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 FAM74A1Q5RGS3 127 aa6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 ZNF680Q8NEM1 530 aa6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 TMEM263Q8WUH6 116 aaKnown RBP6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 BLNKQ8WV28 456 aa6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 MBD3L1Q8WWY6 194 aa6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 RPUSD4Q96CM3 377 aaKnown RBP6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 FAM167A-AS1Q96KT0 104 aa6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 SLC25A2Q9BXI2 301 aa6.14□□□□□ -1.43
CDK5RAP3-229ENST00000583697 MAP1LC3B2A6NCE7 125 aa6.13□□□□□ -1.43
CDK5RAP3-229ENST00000583697 H7BYZ3 331 aa6.13□□□□□ -1.43
CDK5RAP3-229ENST00000583697 PRM2P04554 102 aa6.13□□□□□ -1.43
CDK5RAP3-229ENST00000583697 OR10J4P0C629 311 aa6.13□□□□□ -1.43
CDK5RAP3-229ENST00000583697 PYYP10082 97 aa6.13□□□□□ -1.43
CDK5RAP3-229ENST00000583697 AZU1P20160 251 aa6.13□□□□□ -1.43
CDK5RAP3-229ENST00000583697 OR10J6PQ8NGY7 276 aa6.13□□□□□ -1.43
CDK5RAP3-229ENST00000583697 SAT2Q96F10 170 aaPredicted RBP6.13□□□□□ -1.43
CDK5RAP3-229ENST00000583697 C20orf144Q9BQM9 153 aa6.13□□□□□ -1.43
CDK5RAP3-229ENST00000583697 MAP1LC3BQ9GZQ8 125 aa6.13□□□□□ -1.43
CDK5RAP3-229ENST00000583697 TMEM167BQ9NRX6 74 aa6.13□□□□□ -1.43
CDK5RAP3-229ENST00000583697 TIMM8BQ9Y5J9 83 aaPredicted RBP6.13□□□□□ -1.43
CDK5RAP3-229ENST00000583697 TRBV19A0A075B6N1 114 aa6.12□□□□□ -1.43
CDK5RAP3-229ENST00000583697 NBDYA0A0U1RRE5 68 aa6.12□□□□□ -1.43
CDK5RAP3-229ENST00000583697 A0A1B0GV50 99 aa6.12□□□□□ -1.43
CDK5RAP3-229ENST00000583697 PLAC8L1A1L4L8 177 aa6.12□□□□□ -1.43
CDK5RAP3-229ENST00000583697 CBY3A6NI87 242 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms