RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 NDFIP1Q9BT67 221 aa10.96□□□□□ -0.65
SENP3-208ENST00000583277 SAPCD1Q5SSQ6 148 aa10.95□□□□□ -0.66
SENP3-208ENST00000583277 TMEM183AQ8IXX5 376 aa10.95□□□□□ -0.66
SENP3-208ENST00000583277 OR8A1Q8NGG7 326 aa10.95□□□□□ -0.66
SENP3-208ENST00000583277 OCC1Q8TAD7 63 aa10.95□□□□□ -0.66
SENP3-208ENST00000583277 VGLL1Q99990 258 aa10.95□□□□□ -0.66
SENP3-208ENST00000583277 BIN3Q9NQY0 253 aa10.95□□□□□ -0.66
SENP3-208ENST00000583277 ZNF256Q9Y2P7 627 aaPredicted RBP10.95□□□□□ -0.66
SENP3-208ENST00000583277 NOTCH3Q9UM47 2321 aa10.95□□□□□ -0.66
SENP3-208ENST00000583277 IZUMO1RA6ND01 250 aa10.94□□□□□ -0.66
SENP3-208ENST00000583277 PGPEP1LA6NFU8 196 aa10.94□□□□□ -0.66
SENP3-208ENST00000583277 NPIPB6E9PJ23 425 aa10.94□□□□□ -0.66
SENP3-208ENST00000583277 WFDC9Q8NEX5 89 aa10.94□□□□□ -0.66
SENP3-208ENST00000583277 LINC00477Q96M19 166 aa10.94□□□□□ -0.66
SENP3-208ENST00000583277 PPP1R14DQ9NXH3 145 aa10.94□□□□□ -0.66
SENP3-208ENST00000583277 IGLV2-8P01709 118 aa10.94□□□□□ -0.66
SENP3-208ENST00000583277 MGST1P10620 155 aaKnown RBP10.94□□□□□ -0.66
SENP3-208ENST00000583277 ZNF138P52744 262 aa10.94□□□□□ -0.66
SENP3-208ENST00000583277 CMC4P56277 68 aaPredicted RBP10.94□□□□□ -0.66
SENP3-208ENST00000583277 HIST1H1AQ02539 215 aaPredicted RBP10.94□□□□□ -0.66
SENP3-208ENST00000583277 EBLN2Q6P2I7 272 aa10.94□□□□□ -0.66
SENP3-208ENST00000583277 FOXI2Q6ZQN5 318 aa10.94□□□□□ -0.66
SENP3-208ENST00000583277 ISOC2Q96AB3 205 aa10.94□□□□□ -0.66
SENP3-208ENST00000583277 MLST8Q9BVC4 326 aa10.94□□□□□ -0.66
SENP3-208ENST00000583277 LENEPQ9Y5L5 61 aa10.94□□□□□ -0.66
SENP3-208ENST00000583277 ANK2Q01484 3957 aa10.93□□□□□ -0.66
SENP3-208ENST00000583277 K7EN84 100 aa10.93□□□□□ -0.66
SENP3-208ENST00000583277 GCGP01275 180 aa10.93□□□□□ -0.66
SENP3-208ENST00000583277 MT-ND4LP03901 98 aa10.93□□□□□ -0.66
SENP3-208ENST00000583277 PRB4P10163 310 aaPredicted RBP10.93□□□□□ -0.66
SENP3-208ENST00000583277 ERCC8Q13216 396 aa10.93□□□□□ -0.66
SENP3-208ENST00000583277 NHLRC2Q8NBF2 726 aa10.93□□□□□ -0.66
SENP3-208ENST00000583277 Q8TAT8 98 aa10.93□□□□□ -0.66
SENP3-208ENST00000583277 PRR25Q96S07 402 aa10.93□□□□□ -0.66
SENP3-208ENST00000583277 GPR61Q9BZJ8 451 aa10.93□□□□□ -0.66
SENP3-208ENST00000583277 AGPAT4-IT1Q9H0P7 198 aa10.93□□□□□ -0.66
SENP3-208ENST00000583277 MAP6D1Q9H9H5 199 aa10.93□□□□□ -0.66
SENP3-208ENST00000583277 AURKAIP1Q9NWT8 199 aaPredicted RBP10.93□□□□□ -0.66
SENP3-208ENST00000583277 A0A087WWC5 75 aa10.92□□□□□ -0.66
SENP3-208ENST00000583277 TRBV7-9A0A0J9YWB2 115 aa10.92□□□□□ -0.66
SENP3-208ENST00000583277 C7orf77A4D0Y5 90 aa10.92□□□□□ -0.66
SENP3-208ENST00000583277 DUSP14O95147 198 aaKnown RBP10.92□□□□□ -0.66
SENP3-208ENST00000583277 CT45A10P0DMU9 189 aa10.92□□□□□ -0.66
SENP3-208ENST00000583277 DEFB131AP59861 70 aa10.92□□□□□ -0.66
SENP3-208ENST00000583277 COX8CQ7Z4L0 72 aa10.92□□□□□ -0.66
SENP3-208ENST00000583277 SAV1Q9H4B6 383 aaPredicted RBP10.92□□□□□ -0.66
SENP3-208ENST00000583277 ZNF492Q9P255 531 aa10.92□□□□□ -0.66
SENP3-208ENST00000583277 TRRAPQ9Y4A5 3859 aa10.92□□□□□ -0.66
SENP3-208ENST00000583277 A0A0J9YX75 114 aa10.91□□□□□ -0.66
SENP3-208ENST00000583277 F6UB75 175 aa10.91□□□□□ -0.66
SENP3-208ENST00000583277 PPP1R2P9O14990 202 aa10.91□□□□□ -0.66
SENP3-208ENST00000583277 SFRP2Q96HF1 295 aa10.91□□□□□ -0.66
SENP3-208ENST00000583277 FAM110AQ9BQ89 295 aa10.91□□□□□ -0.66
SENP3-208ENST00000583277 RPS10P5Q9NQ39 176 aa10.91□□□□□ -0.66
SENP3-208ENST00000583277 WIPF1O43516 503 aa10.9□□□□□ -0.66
SENP3-208ENST00000583277 ZNF705DP0CH99 300 aaPredicted RBP10.9□□□□□ -0.66
SENP3-208ENST00000583277 ZNF705BP0CI00 300 aaPredicted RBP10.9□□□□□ -0.66
SENP3-208ENST00000583277 RIPPLY3P57055 190 aa10.9□□□□□ -0.66
SENP3-208ENST00000583277 BEAN1Q3B7T3 259 aa10.9□□□□□ -0.66
SENP3-208ENST00000583277 ATRAIDQ6UW56 229 aa10.9□□□□□ -0.66
SENP3-208ENST00000583277 C15orf54Q8N8G6 183 aa10.9□□□□□ -0.66
SENP3-208ENST00000583277 ANAPC16Q96DE5 110 aa10.9□□□□□ -0.66
SENP3-208ENST00000583277 ODF3Q96PU9 254 aa10.9□□□□□ -0.66
SENP3-208ENST00000583277 CTDSP1Q9GZU7 261 aa10.9□□□□□ -0.66
SENP3-208ENST00000583277 OR11H12B2RN74 326 aa10.9□□□□□ -0.67
SENP3-208ENST00000583277 HLA-DRB4P13762 266 aa10.9□□□□□ -0.67
SENP3-208ENST00000583277 DEFB1P60022 68 aa10.9□□□□□ -0.67
SENP3-208ENST00000583277 ERVFC1-1P60608 527 aa10.9□□□□□ -0.67
SENP3-208ENST00000583277 OR5I1Q13606 314 aa10.9□□□□□ -0.67
SENP3-208ENST00000583277 ODF3L2Q3SX64 289 aa10.9□□□□□ -0.67
SENP3-208ENST00000583277 RNF212Q495C1 297 aa10.9□□□□□ -0.67
SENP3-208ENST00000583277 SMUG1Q53HV7 270 aa10.9□□□□□ -0.67
SENP3-208ENST00000583277 PRR27Q6MZM9 219 aa10.9□□□□□ -0.67
SENP3-208ENST00000583277 SPATA3Q8NHX4 192 aa10.9□□□□□ -0.67
SENP3-208ENST00000583277 ZC2HC1AQ96GY0 325 aa10.9□□□□□ -0.67
SENP3-208ENST00000583277 HLA-DRB4X5D2U9 266 aa10.9□□□□□ -0.67
SENP3-208ENST00000583277 IBA57Q5T440 356 aaKnown RBP10.89□□□□□ -0.67
SENP3-208ENST00000583277 GDF5OSQ5U4N7 250 aa10.89□□□□□ -0.67
SENP3-208ENST00000583277 FAM231DQ6ZW35 169 aa10.89□□□□□ -0.67
SENP3-208ENST00000583277 OR10G8Q8NGN5 311 aa10.89□□□□□ -0.67
SENP3-208ENST00000583277 C8orf49Q96NF6 230 aa10.89□□□□□ -0.67
SENP3-208ENST00000583277 OSTCQ9NRP0 149 aa10.89□□□□□ -0.67
SENP3-208ENST00000583277 TMEM242Q9NWH2 141 aa10.89□□□□□ -0.67
SENP3-208ENST00000583277 H7BYZ3 331 aa10.88□□□□□ -0.67
SENP3-208ENST00000583277 ACTL10Q5JWF8 245 aa10.88□□□□□ -0.67
SENP3-208ENST00000583277 PRR31Q5SQ13 230 aa10.88□□□□□ -0.67
SENP3-208ENST00000583277 FAM162BQ5T6X4 162 aa10.88□□□□□ -0.67
SENP3-208ENST00000583277 DAZAP1Q96EP5 407 aaKnown RBP10.88□□□□□ -0.67
SENP3-208ENST00000583277 FAM19A4Q96LR4 140 aa10.88□□□□□ -0.67
SENP3-208ENST00000583277 ASCL2Q99929 193 aa10.88□□□□□ -0.67
SENP3-208ENST00000583277 AGRNO00468 2067 aa10.88□□□□□ -0.67
SENP3-208ENST00000583277 IGLL1P15814 213 aa10.87□□□□□ -0.67
SENP3-208ENST00000583277 CRISP2P16562 243 aa10.87□□□□□ -0.67
SENP3-208ENST00000583277 LEPP41159 167 aa10.87□□□□□ -0.67
SENP3-208ENST00000583277 RNASE7Q9H1E1 156 aaKnown RBP10.87□□□□□ -0.67
SENP3-208ENST00000583277 KNCNA6PVL3 124 aa10.86□□□□□ -0.67
SENP3-208ENST00000583277 A8MTW9 85 aa10.86□□□□□ -0.67
SENP3-208ENST00000583277 H3BMM0 161 aa10.86□□□□□ -0.67
SENP3-208ENST00000583277 P01737 135 aa10.86□□□□□ -0.67
SENP3-208ENST00000583277 TSPOP30536 169 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms