RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 SERF2P84101 59 aa9.02□□□□□ -0.97
SMARCE1-218ENST00000582955 TMEM78Q5T7P6 136 aa9.02□□□□□ -0.97
SMARCE1-218ENST00000582955 LYPD1Q8N2G4 141 aa9.02□□□□□ -0.97
SMARCE1-218ENST00000582955 HYLS1Q96M11 299 aa9.02□□□□□ -0.97
SMARCE1-218ENST00000582955 LINC00477Q96M19 166 aa9.02□□□□□ -0.97
SMARCE1-218ENST00000582955 LYSTQ99698 3801 aa9.02□□□□□ -0.97
SMARCE1-218ENST00000582955 C20orf144Q9BQM9 153 aa9.02□□□□□ -0.97
SMARCE1-218ENST00000582955 AGPAT4-IT1Q9H0P7 198 aa9.02□□□□□ -0.97
SMARCE1-218ENST00000582955 DKK2Q9UBU2 259 aa9.02□□□□□ -0.97
SMARCE1-218ENST00000582955 SACSQ9NZJ4 4579 aa9.02□□□□□ -0.97
SMARCE1-218ENST00000582955 PLECQ15149 4684 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-218ENST00000582955 DEFB131BA0A096LNP1 70 aa9.01□□□□□ -0.97
SMARCE1-218ENST00000582955 TRAV12-3A0A0B4J271 114 aa9.01□□□□□ -0.97
SMARCE1-218ENST00000582955 IGLL5B9A064 214 aa9.01□□□□□ -0.97
SMARCE1-218ENST00000582955 H7BYZ3 331 aa9.01□□□□□ -0.97
SMARCE1-218ENST00000582955 TAAR5O14804 337 aa9.01□□□□□ -0.97
SMARCE1-218ENST00000582955 ARL14EPLP0DKL9 152 aa9.01□□□□□ -0.97
SMARCE1-218ENST00000582955 AZU1P20160 251 aa9.01□□□□□ -0.97
SMARCE1-218ENST00000582955 C9orf47Q6ZRZ4 202 aa9.01□□□□□ -0.97
SMARCE1-218ENST00000582955 RAB24Q969Q5 203 aa9.01□□□□□ -0.97
SMARCE1-218ENST00000582955 VGLL1Q99990 258 aa9.01□□□□□ -0.97
SMARCE1-218ENST00000582955 NIPSNAP3BQ9BS92 247 aa9.01□□□□□ -0.97
SMARCE1-218ENST00000582955 RPH3ALQ9UNE2 315 aa9.01□□□□□ -0.97
SMARCE1-218ENST00000582955 PGPA6NDG6 321 aa9□□□□□ -0.97
SMARCE1-218ENST00000582955 LY6G6CO95867 125 aa9□□□□□ -0.97
SMARCE1-218ENST00000582955 SLC25A5P05141 298 aaKnown RBP9□□□□□ -0.97
SMARCE1-218ENST00000582955 STAG3L2P0CL84 134 aa9□□□□□ -0.97
SMARCE1-218ENST00000582955 STAG3L3P0CL85 134 aa9□□□□□ -0.97
SMARCE1-218ENST00000582955 FAM74A1Q5RGS3 127 aa9□□□□□ -0.97
SMARCE1-218ENST00000582955 CMTM2Q8TAZ6 248 aa9□□□□□ -0.97
SMARCE1-218ENST00000582955 LINC00476Q8WZB0 136 aa9□□□□□ -0.97
SMARCE1-218ENST00000582955 C16orf74Q96GX8 76 aa9□□□□□ -0.97
SMARCE1-218ENST00000582955 ACTR3CQ9C0K3 210 aaPredicted RBP9□□□□□ -0.97
SMARCE1-218ENST00000582955 OTORQ9NRC9 128 aa9□□□□□ -0.97
SMARCE1-218ENST00000582955 ALMS1Q8TCU4 4167 aa9□□□□□ -0.97
SMARCE1-218ENST00000582955 C7orf71A4D174 169 aa8.99□□□□□ -0.97
SMARCE1-218ENST00000582955 GPX1P07203 203 aa8.99□□□□□ -0.97
SMARCE1-218ENST00000582955 HTN3P15516 51 aa8.99□□□□□ -0.97
SMARCE1-218ENST00000582955 RNASE4P34096 147 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-218ENST00000582955 ZNF138P52744 262 aa8.99□□□□□ -0.97
SMARCE1-218ENST00000582955 DAD1P61803 113 aa8.99□□□□□ -0.97
SMARCE1-218ENST00000582955 BTN1A1Q13410 526 aa8.99□□□□□ -0.97
SMARCE1-218ENST00000582955 AKR1C8PQ5T2L2 129 aa8.99□□□□□ -0.97
SMARCE1-218ENST00000582955 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
SMARCE1-218ENST00000582955 CCDC28AQ8IWP9 274 aa8.99□□□□□ -0.97
SMARCE1-218ENST00000582955 IQCF2Q8IXL9 164 aa8.99□□□□□ -0.97
SMARCE1-218ENST00000582955 Q8TAT8 98 aa8.99□□□□□ -0.97
SMARCE1-218ENST00000582955 RXFP4Q8TDU9 374 aa8.99□□□□□ -0.97
SMARCE1-218ENST00000582955 ARPC5LQ9BPX5 153 aa8.99□□□□□ -0.97
SMARCE1-218ENST00000582955 RYR2Q92736 4967 aa8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 RBAKDNA6NC62 111 aa8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 LYRM9A8MSI8 78 aa8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 KLLNB2CW77 178 aa8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 DIRC3C9JPN6 131 aa8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 GCHFRP30047 84 aa8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 TCTAP57738 103 aa8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 CD300CQ08708 224 aa8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 ZNF345Q14585 488 aa8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 ZNF493Q6ZR52 646 aa8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 KCNRGQ8N5I3 272 aa8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 OR11H4Q8NGC9 324 aa8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 TMEM263Q8WUH6 116 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 FAM19A4Q96LR4 140 aa8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 CYTL1Q9NRR1 136 aa8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 ZNF492Q9P255 531 aa8.98□□□□□ -0.97
SMARCE1-218ENST00000582955 IGHV4-4A0A075B6R2 117 aa8.97□□□□□ -0.97
SMARCE1-218ENST00000582955 PLAC8L1A1L4L8 177 aa8.97□□□□□ -0.97
SMARCE1-218ENST00000582955 HMSDA8MTL9 139 aa8.97□□□□□ -0.97
SMARCE1-218ENST00000582955 CXorf1O96002 111 aa8.97□□□□□ -0.97
SMARCE1-218ENST00000582955 DEFB130BP0DP73 79 aa8.97□□□□□ -0.97
SMARCE1-218ENST00000582955 DEFB130AP0DP74 79 aa8.97□□□□□ -0.97
SMARCE1-218ENST00000582955 CRISP2P16562 243 aa8.97□□□□□ -0.97
SMARCE1-218ENST00000582955 SSX7Q7RTT5 188 aa8.97□□□□□ -0.97
SMARCE1-218ENST00000582955 RNASE8Q8TDE3 154 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-218ENST00000582955 PYGO2Q9BRQ0 406 aa8.97□□□□□ -0.97
SMARCE1-218ENST00000582955 TMEM167BQ9NRX6 74 aa8.97□□□□□ -0.97
SMARCE1-218ENST00000582955 TIMM8BQ9Y5J9 83 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-218ENST00000582955 A0A0D9SG52 128 aa8.96□□□□□ -0.98
SMARCE1-218ENST00000582955 CTXND1A0A1B0GTU2 59 aa8.96□□□□□ -0.98
SMARCE1-218ENST00000582955 KANTRA0A1W2PQU2 76 aa8.96□□□□□ -0.98
SMARCE1-218ENST00000582955 NMBP08949 121 aa8.96□□□□□ -0.98
SMARCE1-218ENST00000582955 GNG5P63218 68 aa8.96□□□□□ -0.98
SMARCE1-218ENST00000582955 PRR9Q5T870 116 aa8.96□□□□□ -0.98
SMARCE1-218ENST00000582955 GOLT1AQ6ZVE7 132 aa8.96□□□□□ -0.98
SMARCE1-218ENST00000582955 ZFAND2AQ8N6M9 145 aa8.96□□□□□ -0.98
SMARCE1-218ENST00000582955 ZNF471Q9BX82 626 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-218ENST00000582955 NOP10Q9NPE3 64 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-218ENST00000582955 APLNQ9ULZ1 77 aa8.96□□□□□ -0.98
SMARCE1-218ENST00000582955 DNAH1Q9P2D7 4330 aa8.96□□□□□ -0.98
SMARCE1-218ENST00000582955 CBY3A6NI87 242 aa8.95□□□□□ -0.98
SMARCE1-218ENST00000582955 SNURFLB1AK76 121 aa8.95□□□□□ -0.98
SMARCE1-218ENST00000582955 ZNF726P1Q15940 193 aa8.95□□□□□ -0.98
SMARCE1-218ENST00000582955 ST6GAL2Q96JF0 529 aa8.95□□□□□ -0.98
SMARCE1-218ENST00000582955 TRBV7-9A0A0J9YWB2 115 aa8.94□□□□□ -0.98
SMARCE1-218ENST00000582955 RGS13O14921 159 aa8.94□□□□□ -0.98
SMARCE1-218ENST00000582955 BCL2L11O43521 198 aa8.94□□□□□ -0.98
SMARCE1-218ENST00000582955 PFDN1O60925 122 aa8.94□□□□□ -0.98
SMARCE1-218ENST00000582955 ZNF324O75467 553 aaPredicted RBP8.94□□□□□ -0.98
SMARCE1-218ENST00000582955 FGF8P55075 233 aaPredicted RBP8.94□□□□□ -0.98
SMARCE1-218ENST00000582955 LGALS9CQ6DKI2 356 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms