RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 GTSCR1Q86UQ5 136 aa8.91□□□□□ -0.98
CCDC57-216ENST00000582885 SMIM12Q96EX1 92 aa8.91□□□□□ -0.98
CCDC57-216ENST00000582885 LINC00479Q96M42 142 aa8.91□□□□□ -0.98
CCDC57-216ENST00000582885 ODF3Q96PU9 254 aa8.91□□□□□ -0.98
CCDC57-216ENST00000582885 VGLL1Q99990 258 aa8.91□□□□□ -0.98
CCDC57-216ENST00000582885 SMIM7Q9BQ49 75 aa8.91□□□□□ -0.98
CCDC57-216ENST00000582885 DERL1Q9BUN8 251 aa8.91□□□□□ -0.98
CCDC57-216ENST00000582885 SEC11CQ9BY50 192 aa8.91□□□□□ -0.98
CCDC57-216ENST00000582885 AGPAT4-IT1Q9H0P7 198 aa8.91□□□□□ -0.98
CCDC57-216ENST00000582885 PSG8Q9UQ74 426 aa8.91□□□□□ -0.98
CCDC57-216ENST00000582885 ZFP30Q9Y2G7 519 aa8.91□□□□□ -0.98
CCDC57-216ENST00000582885 LY96Q9Y6Y9 160 aa8.91□□□□□ -0.98
CCDC57-216ENST00000582885 NBEAL1Q6ZS30 2694 aa8.9□□□□□ -0.98
CCDC57-216ENST00000582885 TRAV8-1A0A0A6YYK1 113 aa8.9□□□□□ -0.98
CCDC57-216ENST00000582885 TRAV34A0A0B4J273 112 aa8.9□□□□□ -0.98
CCDC57-216ENST00000582885 F6UB75 175 aa8.9□□□□□ -0.98
CCDC57-216ENST00000582885 LTAP01374 205 aa8.9□□□□□ -0.98
CCDC57-216ENST00000582885 CD7P09564 240 aa8.9□□□□□ -0.98
CCDC57-216ENST00000582885 HLA-DRB4P13762 266 aa8.9□□□□□ -0.98
CCDC57-216ENST00000582885 ZNF138P52744 262 aa8.9□□□□□ -0.98
CCDC57-216ENST00000582885 CEBPGP53567 150 aa8.9□□□□□ -0.98
CCDC57-216ENST00000582885 HIST1H1AQ02539 215 aaPredicted RBP8.9□□□□□ -0.98
CCDC57-216ENST00000582885 SAPCD1Q5SSQ6 148 aa8.9□□□□□ -0.98
CCDC57-216ENST00000582885 SAMD5Q5TGI4 173 aa8.9□□□□□ -0.98
CCDC57-216ENST00000582885 Q86TA4 180 aa8.9□□□□□ -0.98
CCDC57-216ENST00000582885 IGF2BP2-AS1Q96M15 143 aa8.9□□□□□ -0.98
CCDC57-216ENST00000582885 ZNF492Q9P255 531 aa8.9□□□□□ -0.98
CCDC57-216ENST00000582885 HLA-DRB4X5D2U9 266 aa8.9□□□□□ -0.98
CCDC57-216ENST00000582885 TRBV20OR9-2A0A075B6H5 130 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 F8W036 122 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 H3BMM0 161 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 GNG4P50150 75 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 DEFB1P60022 68 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 ERCC8Q13216 396 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 TMEM241Q24JQ0 296 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 ZNF674Q2M3X9 581 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 CENPWQ5EE01 88 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 GDF5OSQ5U4N7 250 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 COX8CQ7Z4L0 72 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 TMEM183AQ8IXX5 376 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 Q8N1Y9 231 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 FAM19A4Q96LR4 140 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 PRR25Q96S07 402 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 NIPSNAP3BQ9BS92 247 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 MLST8Q9BVC4 326 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 NAT8Q9UHE5 227 aa8.89□□□□□ -0.99
CCDC57-216ENST00000582885 CARHSP1Q9Y2V2 147 aaKnown RBP8.89□□□□□ -0.99
CCDC57-216ENST00000582885 MGAM2Q2M2H8 2515 aa8.88□□□□□ -0.99
CCDC57-216ENST00000582885 ZNF705DP0CH99 300 aaPredicted RBP8.88□□□□□ -0.99
CCDC57-216ENST00000582885 ZNF705BP0CI00 300 aaPredicted RBP8.88□□□□□ -0.99
CCDC57-216ENST00000582885 CT45A10P0DMU9 189 aa8.88□□□□□ -0.99
CCDC57-216ENST00000582885 CRISP2P16562 243 aa8.88□□□□□ -0.99
CCDC57-216ENST00000582885 ADCYAP1P18509 176 aa8.88□□□□□ -0.99
CCDC57-216ENST00000582885 ACTL10Q5JWF8 245 aa8.88□□□□□ -0.99
CCDC57-216ENST00000582885 PRNTQ86SH4 94 aa8.88□□□□□ -0.99
CCDC57-216ENST00000582885 BAGE2Q86Y30 109 aa8.88□□□□□ -0.99
CCDC57-216ENST00000582885 APRG1Q8IVJ8 170 aa8.88□□□□□ -0.99
CCDC57-216ENST00000582885 SGK494Q96LW2 274 aa8.88□□□□□ -0.99
CCDC57-216ENST00000582885 NDFIP1Q9BT67 221 aa8.88□□□□□ -0.99
CCDC57-216ENST00000582885 NOTCH1P46531 2555 aa8.88□□□□□ -0.99
CCDC57-216ENST00000582885 KNCNA6PVL3 124 aa8.87□□□□□ -0.99
CCDC57-216ENST00000582885 IGLV2-8P01709 118 aa8.87□□□□□ -0.99
CCDC57-216ENST00000582885 PRB4P10163 310 aaPredicted RBP8.87□□□□□ -0.99
CCDC57-216ENST00000582885 KRTAP10-11P60412 298 aa8.87□□□□□ -0.99
CCDC57-216ENST00000582885 PNRC1Q12796 327 aaPredicted RBP8.87□□□□□ -0.99
CCDC57-216ENST00000582885 ZNF124Q15973 351 aa8.87□□□□□ -0.99
CCDC57-216ENST00000582885 KPRPQ5T749 579 aaPredicted RBP8.87□□□□□ -0.99
CCDC57-216ENST00000582885 AMTNQ6UX39 209 aa8.87□□□□□ -0.99
CCDC57-216ENST00000582885 TRPT1Q86TN4 253 aaKnown RBP8.87□□□□□ -0.99
CCDC57-216ENST00000582885 OCC1Q8TAD7 63 aa8.87□□□□□ -0.99
CCDC57-216ENST00000582885 TVP23CQ96ET8 276 aa8.87□□□□□ -0.99
CCDC57-216ENST00000582885 SDF2L1Q9HCN8 221 aa8.87□□□□□ -0.99
CCDC57-216ENST00000582885 G3V4G9 280 aa8.86□□□□□ -0.99
CCDC57-216ENST00000582885 TSPOP30536 169 aa8.86□□□□□ -0.99
CCDC57-216ENST00000582885 LEPP41159 167 aa8.86□□□□□ -0.99
CCDC57-216ENST00000582885 STHQ8IWL8 128 aa8.86□□□□□ -0.99
CCDC57-216ENST00000582885 OR4B1Q8NGF8 309 aa8.86□□□□□ -0.99
CCDC57-216ENST00000582885 Q8TAT8 98 aa8.86□□□□□ -0.99
CCDC57-216ENST00000582885 BIN3Q9NQY0 253 aa8.86□□□□□ -0.99
CCDC57-216ENST00000582885 KLLNB2CW77 178 aa8.85□□□□□ -0.99
CCDC57-216ENST00000582885 RPL23P62829 140 aaKnown RBP8.85□□□□□ -0.99
CCDC57-216ENST00000582885 SMUG1Q53HV7 270 aa8.85□□□□□ -0.99
CCDC57-216ENST00000582885 LINC01551Q86U37 167 aa8.85□□□□□ -0.99
CCDC57-216ENST00000582885 ZFAND2AQ8N6M9 145 aa8.85□□□□□ -0.99
CCDC57-216ENST00000582885 PGPEP1LA6NFU8 196 aa8.84□□□□□ -0.99
CCDC57-216ENST00000582885 A8MZ25 164 aa8.84□□□□□ -0.99
CCDC57-216ENST00000582885 ATP6V1G1O75348 118 aa8.84□□□□□ -0.99
CCDC57-216ENST00000582885 GCGP01275 180 aa8.84□□□□□ -0.99
CCDC57-216ENST00000582885 AMBPP02760 352 aa8.84□□□□□ -0.99
CCDC57-216ENST00000582885 S100A1P23297 94 aa8.84□□□□□ -0.99
CCDC57-216ENST00000582885 CDKN1BP46527 198 aa8.84□□□□□ -0.99
CCDC57-216ENST00000582885 MORN3Q6PF18 240 aaPredicted RBP8.84□□□□□ -0.99
CCDC57-216ENST00000582885 DEFB125Q8N687 156 aa8.84□□□□□ -0.99
CCDC57-216ENST00000582885 C8orf49Q96NF6 230 aa8.84□□□□□ -0.99
CCDC57-216ENST00000582885 ASCL2Q99929 193 aa8.84□□□□□ -0.99
CCDC57-216ENST00000582885 WFDC10AQ9H1F0 79 aa8.84□□□□□ -0.99
CCDC57-216ENST00000582885 RBMY1BA6NDE4 496 aaKnown RBP8.83□□□□□ -1
CCDC57-216ENST00000582885 RBMY1EA6NEQ0 496 aaKnown RBP8.83□□□□□ -1
CCDC57-216ENST00000582885 B4DEV8 164 aa8.83□□□□□ -1
CCDC57-216ENST00000582885 K7EN84 100 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms