RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	IGLV2-23	P01705	113 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	FABP1	P07148	127 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	CRYGC	P07315	174 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	CRYGB	P07316	175 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	IL6R	P08887	468 aa	Predicted RBP	3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	TRGC1	P0CF51	173 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	SAA2	P0DJI9	122 aa	Predicted RBP	3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	HTN3	P15516	51 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	UBE2G2	P60604	165 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	CX3CL1	P78423	397 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	S100A12	P80511	92 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	MEF2B	Q02080	365 aa	Predicted RBP	3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	PNRC1	Q12796	327 aa	Predicted RBP	3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	ADIRF	Q15847	76 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	ZNF124	Q15973	351 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	PRSS8	Q16651	343 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	TMEM241	Q24JQ0	296 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	BSX	Q3C1V8	233 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	PYY3	Q5JQD4	70 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	FAM209B	Q5JX69	171 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	UNQ5815/PRO19632	Q6UWF5	114 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	PPP1R27	Q86WC6	154 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	NPB	Q8NG41	125 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	OR4X1	Q8NH49	305 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	OR52E5	Q8NH55	327 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	CIB3	Q96Q77	187 aa	Predicted RBP	3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	NEU1	Q99519	415 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	DERL1	Q9BUN8	251 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	GGACT	Q9BVM4	153 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	SSBP4	Q9BWG4	385 aa	Predicted RBP	3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	CTDSP1	Q9GZU7	261 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	OR51M1	Q9H341	326 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	NCOR1P1	Q9H4R4	102 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	LINC00574	Q9H8X3	128 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	MANBAL	Q9NQG1	85 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	TMEM140	Q9NV12	185 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	TMEM242	Q9NWH2	141 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	IDI2-AS1	Q9NZ38	188 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	NAT8	Q9UHE5	227 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	GAB2	Q9UQC2	676 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	TNFRSF18	Q9Y5U5	241 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	SELENOK	Q9Y6D0	94 aa		3.23	□□□□□ -1.89
MSI2-216	ENST00000582772	TRBV20OR9-2	A0A075B6H5	130 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	SMCO3	A2RU48	225 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	ZNF729	A6NN14	1252 aa	Predicted RBP	3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	TMEM250	H0YL14	139 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	UPK2	O00526	184 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	NBR2	O15453	112 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	GGCT	O75223	188 aa	Known RBP	3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	CA2	P00918	260 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	MB	P02144	154 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	KRTAP1-4	P0C5Y4	121 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	LINC00869	P0C866	280 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	ARL14EPL	P0DKL9	152 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	CT45A6	P0DMU7	189 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	CT45A5	P0DMU8	189 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	CT45A7	P0DMV0	189 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	OPRK1	P41145	380 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	CDC34	P49427	236 aa	Predicted RBP	3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	PSMB3	P49720	205 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	GNG10	P50151	68 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	ZNF137P	P52743	207 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	POU2AF1	Q16633	256 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	PDZD11	Q5EBL8	140 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	OR4A47	Q6IF82	309 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	ZNF709	Q8N972	641 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	OR51G1	Q8NGK1	321 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	OR10D4P	Q8NGN7	298 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	OR10X1	Q8NGY0	326 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	OR4A16	Q8NH70	328 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	HEYL	Q9NQ87	328 aa	Predicted RBP	3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	YTHDF2	Q9Y5A9	579 aa	Known RBP	3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	PXMP4	Q9Y6I8	212 aa		3.22	□□□□□ -1.89
MSI2-216	ENST00000582772	IGKV1OR2-108	A0A075B7D4	117 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	TEX50	A0A1B0GTY4	177 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	SCO2	A0A1W2PP80	73 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	PGPEP1L	A6NFU8	196 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	CGB1	A6NKQ9	187 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	C17orf112	F2Z3M2	114 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772		H7BYZ3	331 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	NDUFB4	O95168	129 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	HRAS	P01112	189 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	S100A9	P06702	114 aa	Known RBP	3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	STAG3L2	P0CL84	134 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	STAG3L3	P0CL85	134 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	RNASE2	P10153	161 aa	Known RBP	3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	GCHFR	P30047	84 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	GALR1	P47211	349 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	REG1B	P48304	166 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	ERVK-16	P61578	105 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	HSPE1	P61604	102 aa	Known RBP	3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	SSBP2	P81877	361 aa	Predicted RBP	3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	MLANA	Q16655	118 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	WDR73	Q6P4I2	378 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	ZNF562	Q6V9R5	426 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	SLC25A48	Q6ZT89	311 aa	Known RBP	3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	MIR17HG	Q75NE6	70 aa		3.21	□□□□□ -1.9
MSI2-216	ENST00000582772	TMEM144	Q7Z5S9	345 aa		3.21	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 422.1 ms