RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 IL17RELQ6ZVW7 336 aa17.38■□□□□ 0.37
CCDC47-204ENST00000582252 C8orf49Q96NF6 230 aa17.38■□□□□ 0.37
CCDC47-204ENST00000582252 NPFFR1Q9GZQ6 430 aa17.38■□□□□ 0.37
CCDC47-204ENST00000582252 FOSL1P15407 271 aa17.37■□□□□ 0.37
CCDC47-204ENST00000582252 GLMPQ8WWB7 406 aa17.37■□□□□ 0.37
CCDC47-204ENST00000582252 IGHV3OR16-13A0A075B7E8 117 aa17.36■□□□□ 0.37
CCDC47-204ENST00000582252 IGHV3-74A0A0B4J1X5 117 aa17.36■□□□□ 0.37
CCDC47-204ENST00000582252 TRBV12-3P01733 135 aa17.36■□□□□ 0.37
CCDC47-204ENST00000582252 HLA-DMBP28068 263 aa17.36■□□□□ 0.37
CCDC47-204ENST00000582252 SRIP30626 198 aa17.36■□□□□ 0.37
CCDC47-204ENST00000582252 JOSD1Q15040 202 aaPredicted RBP17.36■□□□□ 0.37
CCDC47-204ENST00000582252 KIAA1644Q3SXP7 199 aa17.36■□□□□ 0.37
CCDC47-204ENST00000582252 C8orf86Q6ZUL3 223 aa17.36■□□□□ 0.37
CCDC47-204ENST00000582252 BORCS7Q96B45 105 aa17.36■□□□□ 0.37
CCDC47-204ENST00000582252 IGHV3-49A0A0A0MS15 119 aa17.35■□□□□ 0.37
CCDC47-204ENST00000582252 A0A1B0GW15 77 aa17.35■□□□□ 0.37
CCDC47-204ENST00000582252 HAX1O00165 279 aa17.35■□□□□ 0.37
CCDC47-204ENST00000582252 RPS20P60866 119 aaKnown RBP17.35■□□□□ 0.37
CCDC47-204ENST00000582252 SLAQ13239 276 aa17.35■□□□□ 0.37
CCDC47-204ENST00000582252 IGFL4Q6B9Z1 124 aa17.35■□□□□ 0.37
CCDC47-204ENST00000582252 TMEM189A5PLL7 270 aa17.35■□□□□ 0.37
CCDC47-204ENST00000582252 ZNF705FA8MVS1 300 aaPredicted RBP17.35■□□□□ 0.37
CCDC47-204ENST00000582252 A8MWP6 167 aa17.35■□□□□ 0.37
CCDC47-204ENST00000582252 SERF1AO75920 110 aa17.35■□□□□ 0.37
CCDC47-204ENST00000582252 PSMB8P28062 276 aa17.35■□□□□ 0.37
CCDC47-204ENST00000582252 CRIP1P50238 77 aa17.35■□□□□ 0.37
CCDC47-204ENST00000582252 RIGQ13278 110 aa17.35■□□□□ 0.37
CCDC47-204ENST00000582252 SCGB2A2Q13296 93 aa17.35■□□□□ 0.37
CCDC47-204ENST00000582252 VGLL1Q99990 258 aa17.35■□□□□ 0.37
CCDC47-204ENST00000582252 PEF1Q9UBV8 284 aaKnown RBP17.35■□□□□ 0.37
CCDC47-204ENST00000582252 TP53TG3Q9ULZ0 132 aa17.35■□□□□ 0.37
CCDC47-204ENST00000582252 A0A1B0GUS0 222 aa17.34■□□□□ 0.37
CCDC47-204ENST00000582252 SH2D1AO60880 128 aa17.34■□□□□ 0.37
CCDC47-204ENST00000582252 A0A1B0GUT8 65 aa17.33■□□□□ 0.37
CCDC47-204ENST00000582252 LY6G6DO95868 133 aa17.33■□□□□ 0.37
CCDC47-204ENST00000582252 GDF5OSQ5U4N7 250 aa17.33■□□□□ 0.37
CCDC47-204ENST00000582252 UNQ9165/PRO28630Q6UXU0 137 aa17.33■□□□□ 0.37
CCDC47-204ENST00000582252 Q71RC1 249 aaPredicted RBP17.33■□□□□ 0.37
CCDC47-204ENST00000582252 C16orf92Q96LL3 132 aa17.33■□□□□ 0.37
CCDC47-204ENST00000582252 ASCL2Q99929 193 aa17.33■□□□□ 0.37
CCDC47-204ENST00000582252 SMR3AQ99954 134 aa17.33■□□□□ 0.37
CCDC47-204ENST00000582252 GZMBP10144 247 aa17.33■□□□□ 0.36
CCDC47-204ENST00000582252 SRSF2Q01130 221 aaKnown RBP17.33■□□□□ 0.36
CCDC47-204ENST00000582252 FAM106AQ4KMX7 169 aa17.33■□□□□ 0.36
CCDC47-204ENST00000582252 RNF182Q8N6D2 247 aa17.33■□□□□ 0.36
CCDC47-204ENST00000582252 NSD1Q96L73 2696 aaPredicted RBP17.32■□□□□ 0.36
CCDC47-204ENST00000582252 TMEM95Q3KNT9 176 aa17.32■□□□□ 0.36
CCDC47-204ENST00000582252 TRAV8-2A0A0B4J237 113 aa17.31■□□□□ 0.36
CCDC47-204ENST00000582252 PRB4P10163 310 aaPredicted RBP17.31■□□□□ 0.36
CCDC47-204ENST00000582252 TMEM78Q5T7P6 136 aa17.31■□□□□ 0.36
CCDC47-204ENST00000582252 Q8TAT8 98 aa17.31■□□□□ 0.36
CCDC47-204ENST00000582252 SAMD10Q9BYL1 202 aa17.31■□□□□ 0.36
CCDC47-204ENST00000582252 GSN-AS1Q9NRJ2 163 aa17.31■□□□□ 0.36
CCDC47-204ENST00000582252 F8P00451 2351 aa17.3■□□□□ 0.36
CCDC47-204ENST00000582252 K7EMT4 169 aa17.3■□□□□ 0.36
CCDC47-204ENST00000582252 NUPR1O60356 82 aa17.3■□□□□ 0.36
CCDC47-204ENST00000582252 KLF5Q13887 457 aaPredicted RBP17.3■□□□□ 0.36
CCDC47-204ENST00000582252 KCNS1Q96KK3 526 aa17.3■□□□□ 0.36
CCDC47-204ENST00000582252 DAZ1Q9NQZ3 744 aaKnown RBP17.3■□□□□ 0.36
CCDC47-204ENST00000582252 IGHV7-4-1A0A0J9YVY3 117 aa17.3■□□□□ 0.36
CCDC47-204ENST00000582252 HOXA3O43365 443 aaPredicted RBP17.3■□□□□ 0.36
CCDC47-204ENST00000582252 LINC00310P59036 64 aa17.3■□□□□ 0.36
CCDC47-204ENST00000582252 LCNL1Q6ZST4 164 aa17.3■□□□□ 0.36
CCDC47-204ENST00000582252 SIGLECL1Q8N7X8 197 aa17.3■□□□□ 0.36
CCDC47-204ENST00000582252 SSBP4Q9BWG4 385 aaPredicted RBP17.3■□□□□ 0.36
CCDC47-204ENST00000582252 FABP5P3A8MUU1 101 aa17.29■□□□□ 0.36
CCDC47-204ENST00000582252 PRAC2D3DTV9 90 aa17.29■□□□□ 0.36
CCDC47-204ENST00000582252 GPHB5Q86YW7 130 aa17.29■□□□□ 0.36
CCDC47-204ENST00000582252 TMEM86BQ8N661 226 aa17.29■□□□□ 0.36
CCDC47-204ENST00000582252 ALKBH7Q9BT30 221 aaPredicted RBP17.29■□□□□ 0.36
CCDC47-204ENST00000582252 ELANEP08246 267 aa17.28■□□□□ 0.36
CCDC47-204ENST00000582252 ZNF138P52744 262 aa17.28■□□□□ 0.36
CCDC47-204ENST00000582252 ERCC8Q13216 396 aa17.28■□□□□ 0.36
CCDC47-204ENST00000582252 FOXE3Q13461 319 aa17.28■□□□□ 0.36
CCDC47-204ENST00000582252 IQCJQ1A5X6 159 aa17.28■□□□□ 0.36
CCDC47-204ENST00000582252 C9orf47Q6ZRZ4 202 aa17.28■□□□□ 0.36
CCDC47-204ENST00000582252 GATD1Q8NB37 220 aa17.28■□□□□ 0.36
CCDC47-204ENST00000582252 C18orf32Q8TCD1 76 aa17.28■□□□□ 0.36
CCDC47-204ENST00000582252 PPP1R14DQ9NXH3 145 aa17.28■□□□□ 0.36
CCDC47-204ENST00000582252 F2Z2F3 143 aa17.27■□□□□ 0.36
CCDC47-204ENST00000582252 ZNF702PQ9H963 129 aa17.27■□□□□ 0.36
CCDC47-204ENST00000582252 UFC1Q9Y3C8 167 aa17.27■□□□□ 0.36
CCDC47-204ENST00000582252 SAMD13Q5VXD3 122 aa17.27■□□□□ 0.35
CCDC47-204ENST00000582252 ARMS2P0C7Q2 107 aa17.26■□□□□ 0.35
CCDC47-204ENST00000582252 SRD5A1P18405 259 aa17.26■□□□□ 0.35
CCDC47-204ENST00000582252 ZNF738Q8NE65 137 aa17.26■□□□□ 0.35
CCDC47-204ENST00000582252 RHPN1-AS1Q9BWJ2 59 aa17.26■□□□□ 0.35
CCDC47-204ENST00000582252 AGPAT4-IT1Q9H0P7 198 aa17.26■□□□□ 0.35
CCDC47-204ENST00000582252 NRN1Q9NPD7 142 aa17.26■□□□□ 0.35
CCDC47-204ENST00000582252 LENEPQ9Y5L5 61 aa17.26■□□□□ 0.35
CCDC47-204ENST00000582252 OVOL1O14753 267 aa17.25■□□□□ 0.35
CCDC47-204ENST00000582252 HIST1H1AQ02539 215 aaPredicted RBP17.25■□□□□ 0.35
CCDC47-204ENST00000582252 TPPP3Q9BW30 176 aa17.25■□□□□ 0.35
CCDC47-204ENST00000582252 SMPXQ9UHP9 88 aa17.24■□□□□ 0.35
CCDC47-204ENST00000582252 LOC102724200A0A096LPH7 203 aaPredicted RBP17.24■□□□□ 0.35
CCDC47-204ENST00000582252 GPX1P07203 203 aa17.24■□□□□ 0.35
CCDC47-204ENST00000582252 ZNF80P51504 273 aaPredicted RBP17.24■□□□□ 0.35
CCDC47-204ENST00000582252 RPL11P62913 178 aaKnown RBP17.24■□□□□ 0.35
CCDC47-204ENST00000582252 CDPF1Q6NVV7 123 aa17.24■□□□□ 0.35
CCDC47-204ENST00000582252 TMSB15BA0A087X1C1 80 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms