RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 LINC00322Q6ZN03 302 aaPredicted RBP0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 AKAP14Q86UN6 197 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 TAC4Q86UU9 113 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 Q8IYB0 196 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 CLECL1Q8IZS7 167 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 FAM19A2Q8N3H0 131 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 FAM216BQ8N7L0 139 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 OR10AC1Q8NH08 325 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 GRPEL2Q8TAA5 225 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 POP5Q969H6 163 aaKnown RBP0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 BORCS5Q969J3 196 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 MAGOHBQ96A72 148 aaKnown RBP0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 RAB37Q96AX2 223 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 EFCAB11Q9BUY7 163 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 CST11Q9H112 138 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 TMEM14CQ9P0S9 112 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 NAT8BQ9UHF3 227 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 TNFSF18Q9UNG2 199 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 TPRKBQ9Y3C4 175 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 MED31Q9Y3C7 131 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 WDR97A6NE52 1622 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 PHRF1Q9P1Y6 1649 aaKnown RBP0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 ERBINQ96RT1 1412 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 DLEC1Q9Y238 1755 aa0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 ZNF142P52746 1687 aaPredicted RBP0.37□□□□□ -2.35
SMCHD1-206ENST00000581631 KDM5CP41229 1560 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 AKAP11Q9UKA4 1901 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 ANKRD30AQ9BXX3 1397 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 A0A096LPI6 279 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 TRBV27A0A0K0K1C4 114 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 PNMA8CA0A1B0GUJ8 204 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 LOC107986453A0A1B0GWG9 222 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 A0A1B0GX51 115 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 C5orf58C9J3I9 102 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 GABARAPH6UMI1 98 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 J3KT08 172 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 IGLV1-51P01701 117 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 IGHV3-33P01772 117 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 TRACP01848 142 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 MT-ND6P03923 174 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 DBIP07108 87 aaKnown RBP0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 NBEAP1P0C6P0 100 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 SCGB1A1P11684 91 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 FABP2P12104 132 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 TPT1P13693 172 aaKnown RBP0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 S100A11P31949 105 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 ETV6P41212 452 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 POLR2HP52434 150 aaKnown RBP0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 DNAJB13P59910 316 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 MAXP61244 160 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 PSG9Q00887 426 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 ASB16-AS1Q495Z4 193 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 C1orf134Q5TEV5 83 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 GLIPR1L1Q6UWM5 242 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 LINC00575Q6W349 94 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 GKN2Q86XP6 184 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 TMEM35BQ8NCS4 154 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 OR5H6Q8NGV6 325 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 OR5AK2Q8NH90 309 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 CCL4L1Q8NHW4 92 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 PSMF1Q92530 271 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 DIRC1Q969H9 104 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 PRELID3AQ96N28 172 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 CCDC115Q96NT0 180 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 AP1S3Q96PC3 154 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 OR4C12Q96R67 309 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 AIF1LQ9BQI0 150 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 LRTM1Q9HBL6 345 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 CDC42SE1Q9NRR8 79 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 C19orf12Q9NSK7 152 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 GINS2Q9Y248 185 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 NDUFAF1Q9Y375 327 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 RNF11Q9Y3C5 154 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 FHAD1B1AJZ9 1412 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 SPEF2Q9C093 1822 aa0.36□□□□□ -2.35
SMCHD1-206ENST00000581631 UHRF1BP1LA0JNW5 1464 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 MED23Q9ULK4 1368 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 LAMB1P07942 1786 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 ASH1LQ9NR48 2969 aaKnown RBP0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 TRAV13-1A0A0B4J241 112 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 A0A1W2PPM0 123 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 ODAMA1E959 279 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 A6NN06 94 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 IFITM5A6NNB3 132 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 JMJD7-PLA2G4BH0Y9G9 81 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 K7ERJ3 54 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 CCL25O15444 150 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 YPEL1O60688 119 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 SULT1C4O75897 302 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 DPM2O94777 84 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 DNAL4O96015 105 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 CD2P06729 351 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 SCTP09683 121 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 FXYD6P3P58550 94 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 PSPHP78330 225 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 DIAPH2-AS1Q14236 149 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 VMA21Q3ZAQ7 101 aa0.35□□□□□ -2.35
SMCHD1-206ENST00000581631 CCDC153Q494R4 210 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms