RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 TMEM88Q6PEY1 159 aa18.96■□□□□ 0.63
LINC00271-207ENST00000580741 ZNF493Q6ZR52 646 aa18.96■□□□□ 0.63
LINC00271-207ENST00000580741 FAM19A4Q96LR4 140 aa18.96■□□□□ 0.63
LINC00271-207ENST00000580741 TIMM8BQ9Y5J9 83 aaPredicted RBP18.96■□□□□ 0.63
LINC00271-207ENST00000580741 C7orf71A4D174 169 aa18.95■□□□□ 0.62
LINC00271-207ENST00000580741 TAS2R45P59539 299 aa18.95■□□□□ 0.62
LINC00271-207ENST00000580741 CD300CQ08708 224 aa18.95■□□□□ 0.62
LINC00271-207ENST00000580741 RGS21Q2M5E4 152 aa18.95■□□□□ 0.62
LINC00271-207ENST00000580741 ACOT6Q3I5F7 207 aaPredicted RBP18.95■□□□□ 0.62
LINC00271-207ENST00000580741 C9orf47Q6ZRZ4 202 aa18.95■□□□□ 0.62
LINC00271-207ENST00000580741 CCDC28AQ8IWP9 274 aa18.95■□□□□ 0.62
LINC00271-207ENST00000580741 HSD17B11Q8NBQ5 300 aa18.95■□□□□ 0.62
LINC00271-207ENST00000580741 FAM210BQ96KR6 192 aa18.95■□□□□ 0.62
LINC00271-207ENST00000580741 AQP10Q96PS8 301 aa18.95■□□□□ 0.62
LINC00271-207ENST00000580741 Q9H3A6 140 aa18.95■□□□□ 0.62
LINC00271-207ENST00000580741 SLC25A5P05141 298 aaKnown RBP18.94■□□□□ 0.62
LINC00271-207ENST00000580741 M6PRP20645 277 aa18.94■□□□□ 0.62
LINC00271-207ENST00000580741 KLLNB2CW77 178 aa18.93■□□□□ 0.62
LINC00271-207ENST00000580741 P0DMU3 169 aa18.93■□□□□ 0.62
LINC00271-207ENST00000580741 FAM231AP0DMU4 169 aa18.93■□□□□ 0.62
LINC00271-207ENST00000580741 FAM231CP0DMU5 169 aa18.93■□□□□ 0.62
LINC00271-207ENST00000580741 RNASE4P34096 147 aaKnown RBP18.93■□□□□ 0.62
LINC00271-207ENST00000580741 TMEM78Q5T7P6 136 aa18.93■□□□□ 0.62
LINC00271-207ENST00000580741 HMGB3O15347 200 aaKnown RBP18.92■□□□□ 0.62
LINC00271-207ENST00000580741 ZNF266Q14584 549 aa18.92■□□□□ 0.62
LINC00271-207ENST00000580741 PRR9Q5T870 116 aa18.92■□□□□ 0.62
LINC00271-207ENST00000580741 Q8TAT8 98 aa18.92■□□□□ 0.62
LINC00271-207ENST00000580741 A0A1W2PPV4 95 aa18.91■□□□□ 0.62
LINC00271-207ENST00000580741 F5H768 121 aa18.91■□□□□ 0.62
LINC00271-207ENST00000580741 CRISP2P16562 243 aa18.91■□□□□ 0.62
LINC00271-207ENST00000580741 OR10G4Q8NGN3 311 aa18.91■□□□□ 0.62
LINC00271-207ENST00000580741 OR10G9Q8NGN4 311 aa18.91■□□□□ 0.62
LINC00271-207ENST00000580741 OR10G7Q8NGN6 311 aa18.91■□□□□ 0.62
LINC00271-207ENST00000580741 PYGO2Q9BRQ0 406 aa18.91■□□□□ 0.62
LINC00271-207ENST00000580741 FXYD6-FXYD2A0A087WZ82 144 aa18.9■□□□□ 0.62
LINC00271-207ENST00000580741 CSN1S1P47710 185 aa18.9■□□□□ 0.62
LINC00271-207ENST00000580741 LYPD1Q8N2G4 141 aa18.9■□□□□ 0.62
LINC00271-207ENST00000580741 ZFAND2AQ8N6M9 145 aa18.9■□□□□ 0.62
LINC00271-207ENST00000580741 POM121L12Q8N7R1 296 aa18.9■□□□□ 0.62
LINC00271-207ENST00000580741 ZNF492Q9P255 531 aa18.9■□□□□ 0.62
LINC00271-207ENST00000580741 DNAH2Q9P225 4427 aa18.89■□□□□ 0.62
LINC00271-207ENST00000580741 CBY3A6NI87 242 aa18.89■□□□□ 0.61
LINC00271-207ENST00000580741 ZNF324O75467 553 aaPredicted RBP18.89■□□□□ 0.61
LINC00271-207ENST00000580741 ATP5G1P05496 136 aa18.89■□□□□ 0.61
LINC00271-207ENST00000580741 GPX1P07203 203 aa18.89■□□□□ 0.61
LINC00271-207ENST00000580741 ATP6V0CP27449 155 aa18.89■□□□□ 0.61
LINC00271-207ENST00000580741 ATP5G3P48201 142 aa18.89■□□□□ 0.61
LINC00271-207ENST00000580741 Q6ZQT7 251 aa18.89■□□□□ 0.61
LINC00271-207ENST00000580741 ASB13Q8WXK3 278 aa18.89■□□□□ 0.61
LINC00271-207ENST00000580741 HYLS1Q96M11 299 aa18.89■□□□□ 0.61
LINC00271-207ENST00000580741 RNF222A6NCQ9 220 aa18.88■□□□□ 0.61
LINC00271-207ENST00000580741 SNURFLB1AK76 121 aa18.88■□□□□ 0.61
LINC00271-207ENST00000580741 ZNF138P52744 262 aa18.88■□□□□ 0.61
LINC00271-207ENST00000580741 UBE2DNLQ8IWF7 75 aa18.88■□□□□ 0.61
LINC00271-207ENST00000580741 OR2T35Q8NGX2 323 aa18.88■□□□□ 0.61
LINC00271-207ENST00000580741 PQLC2Q6ZP29 291 aa18.87■□□□□ 0.61
LINC00271-207ENST00000580741 INO80EQ8NBZ0 244 aaPredicted RBP18.87■□□□□ 0.61
LINC00271-207ENST00000580741 OR2G3Q8NGZ4 309 aa18.87■□□□□ 0.61
LINC00271-207ENST00000580741 SH3BGRL3Q9H299 93 aa18.87■□□□□ 0.61
LINC00271-207ENST00000580741 RPH3ALQ9UNE2 315 aa18.87■□□□□ 0.61
LINC00271-207ENST00000580741 GAGE12BA1L429 117 aa18.86■□□□□ 0.61
LINC00271-207ENST00000580741 DIRC3C9JPN6 131 aa18.86■□□□□ 0.61
LINC00271-207ENST00000580741 GAGE7O76087 117 aa18.86■□□□□ 0.61
LINC00271-207ENST00000580741 GAGE12FP0CL80 117 aa18.86■□□□□ 0.61
LINC00271-207ENST00000580741 GAGE12GP0CL81 117 aa18.86■□□□□ 0.61
LINC00271-207ENST00000580741 GAGE12IP0CL82 117 aa18.86■□□□□ 0.61
LINC00271-207ENST00000580741 CDC34P49427 236 aaPredicted RBP18.86■□□□□ 0.61
LINC00271-207ENST00000580741 OTORQ9NRC9 128 aa18.86■□□□□ 0.61
LINC00271-207ENST00000580741 GSN-AS1Q9NRJ2 163 aa18.86■□□□□ 0.61
LINC00271-207ENST00000580741 PGPA6NDG6 321 aa18.85■□□□□ 0.61
LINC00271-207ENST00000580741 PSMG3Q9BT73 122 aaPredicted RBP18.85■□□□□ 0.61
LINC00271-207ENST00000580741 TNFSF18Q9UNG2 199 aa18.85■□□□□ 0.61
LINC00271-207ENST00000580741 RBAKDNA6NC62 111 aa18.84■□□□□ 0.61
LINC00271-207ENST00000580741 G3V3Q6 166 aa18.84■□□□□ 0.61
LINC00271-207ENST00000580741 NMBP08949 121 aa18.84■□□□□ 0.61
LINC00271-207ENST00000580741 ARL14EPLP0DKL9 152 aa18.84■□□□□ 0.61
LINC00271-207ENST00000580741 RPL7L1Q6DKI1 246 aaKnown RBP18.84■□□□□ 0.61
LINC00271-207ENST00000580741 EIF4E3Q8N5X7 224 aaKnown RBP18.84■□□□□ 0.61
LINC00271-207ENST00000580741 LINC00612Q8N6U2 182 aa18.84■□□□□ 0.61
LINC00271-207ENST00000580741 Q6ZTI0 123 aa18.83■□□□□ 0.6
LINC00271-207ENST00000580741 C15orf53Q8NAA6 179 aa18.83■□□□□ 0.6
LINC00271-207ENST00000580741 C11orf72Q8NBR9 251 aa18.83■□□□□ 0.6
LINC00271-207ENST00000580741 RXFP4Q8TDU9 374 aa18.83■□□□□ 0.6
LINC00271-207ENST00000580741 LINC00467Q9BRT7 94 aa18.83■□□□□ 0.6
LINC00271-207ENST00000580741 TP53TG3Q9ULZ0 132 aa18.83■□□□□ 0.6
LINC00271-207ENST00000580741 M0R2N4 97 aa18.82■□□□□ 0.6
LINC00271-207ENST00000580741 ZNF680Q8NEM1 530 aa18.82■□□□□ 0.6
LINC00271-207ENST00000580741 CMTM2Q8TAZ6 248 aa18.82■□□□□ 0.6
LINC00271-207ENST00000580741 RAB24Q969Q5 203 aa18.82■□□□□ 0.6
LINC00271-207ENST00000580741 RGS13O14921 159 aa18.81■□□□□ 0.6
LINC00271-207ENST00000580741 NUDT3O95989 172 aa18.81■□□□□ 0.6
LINC00271-207ENST00000580741 STAG3L2P0CL84 134 aa18.81■□□□□ 0.6
LINC00271-207ENST00000580741 STAG3L3P0CL85 134 aa18.81■□□□□ 0.6
LINC00271-207ENST00000580741 DAZ2Q13117 558 aaKnown RBP18.81■□□□□ 0.6
LINC00271-207ENST00000580741 ANXA2RQ3ZCQ2 193 aa18.81■□□□□ 0.6
LINC00271-207ENST00000580741 FAT2Q9NYQ8 4349 aa18.81■□□□□ 0.6
LINC00271-207ENST00000580741 IGLV2-18A0A075B6J9 118 aa18.8■□□□□ 0.6
LINC00271-207ENST00000580741 GNG5P63218 68 aa18.8■□□□□ 0.6
LINC00271-207ENST00000580741 OR5I1Q13606 314 aa18.8■□□□□ 0.6
LINC00271-207ENST00000580741 FAM74A1Q5RGS3 127 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms