RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 FAM231AP0DMU4 169 aa18.58■□□□□ 0.56
LIMD2-208ENST00000579814 FAM231CP0DMU5 169 aa18.58■□□□□ 0.56
LIMD2-208ENST00000579814 CSN1S1P47710 185 aa18.58■□□□□ 0.56
LIMD2-208ENST00000579814 TMEM78Q5T7P6 136 aa18.58■□□□□ 0.56
LIMD2-208ENST00000579814 RNASE8Q8TDE3 154 aaKnown RBP18.58■□□□□ 0.56
LIMD2-208ENST00000579814 IGKV2-40A0A087WW87 121 aaPredicted RBP18.57■□□□□ 0.56
LIMD2-208ENST00000579814 IGKV2D-40P01614 121 aaPredicted RBP18.57■□□□□ 0.56
LIMD2-208ENST00000579814 PYGO2Q9BRQ0 406 aa18.57■□□□□ 0.56
LIMD2-208ENST00000579814 NOP10Q9NPE3 64 aaKnown RBP18.57■□□□□ 0.56
LIMD2-208ENST00000579814 Q5BKY6 102 aa18.56■□□□□ 0.56
LIMD2-208ENST00000579814 INO80EQ8NBZ0 244 aaPredicted RBP18.56■□□□□ 0.56
LIMD2-208ENST00000579814 FAM19A4Q96LR4 140 aa18.56■□□□□ 0.56
LIMD2-208ENST00000579814 C7orf71A4D174 169 aa18.55■□□□□ 0.56
LIMD2-208ENST00000579814 CBY3A6NI87 242 aa18.55■□□□□ 0.56
LIMD2-208ENST00000579814 NMBP08949 121 aa18.55■□□□□ 0.56
LIMD2-208ENST00000579814 VGLL1Q99990 258 aa18.55■□□□□ 0.56
LIMD2-208ENST00000579814 Q9H3A6 140 aa18.55■□□□□ 0.56
LIMD2-208ENST00000579814 KLLNB2CW77 178 aa18.54■□□□□ 0.56
LIMD2-208ENST00000579814 GPX1P07203 203 aa18.54■□□□□ 0.56
LIMD2-208ENST00000579814 RNASE4P34096 147 aaKnown RBP18.54■□□□□ 0.56
LIMD2-208ENST00000579814 RAB2AP61019 212 aa18.54■□□□□ 0.56
LIMD2-208ENST00000579814 PQLC2Q6ZP29 291 aa18.54■□□□□ 0.56
LIMD2-208ENST00000579814 HSD17B11Q8NBQ5 300 aa18.54■□□□□ 0.56
LIMD2-208ENST00000579814 OR10G4Q8NGN3 311 aa18.54■□□□□ 0.56
LIMD2-208ENST00000579814 OR10G9Q8NGN4 311 aa18.54■□□□□ 0.56
LIMD2-208ENST00000579814 OR10G7Q8NGN6 311 aa18.54■□□□□ 0.56
LIMD2-208ENST00000579814 ATP5G1P05496 136 aa18.53■□□□□ 0.56
LIMD2-208ENST00000579814 CRISP2P16562 243 aa18.53■□□□□ 0.56
LIMD2-208ENST00000579814 ATP5G3P48201 142 aa18.53■□□□□ 0.56
LIMD2-208ENST00000579814 TMEM88Q6PEY1 159 aa18.53■□□□□ 0.56
LIMD2-208ENST00000579814 POM121L12Q8N7R1 296 aa18.53■□□□□ 0.56
LIMD2-208ENST00000579814 ZNF492Q9P255 531 aa18.53■□□□□ 0.56
LIMD2-208ENST00000579814 SNURFLB1AK76 121 aa18.52■□□□□ 0.56
LIMD2-208ENST00000579814 F5H768 121 aa18.52■□□□□ 0.56
LIMD2-208ENST00000579814 EIF3GO75821 320 aaKnown RBP eCLIP18.52■□□□□ 0.56
LIMD2-208ENST00000579814 ZNF138P52744 262 aa18.52■□□□□ 0.56
LIMD2-208ENST00000579814 CD300CQ08708 224 aa18.52■□□□□ 0.56
LIMD2-208ENST00000579814 RXFP4Q8TDU9 374 aa18.52■□□□□ 0.56
LIMD2-208ENST00000579814 BTN1A1Q13410 526 aa18.51■□□□□ 0.55
LIMD2-208ENST00000579814 OR2T35Q8NGX2 323 aa18.51■□□□□ 0.55
LIMD2-208ENST00000579814 OR2G3Q8NGZ4 309 aa18.51■□□□□ 0.55
LIMD2-208ENST00000579814 PSMG3Q9BT73 122 aaPredicted RBP18.51■□□□□ 0.55
LIMD2-208ENST00000579814 KMT2AQ03164 3969 aa18.51■□□□□ 0.55
LIMD2-208ENST00000579814 VPS13DQ5THJ4 4388 aa18.5■□□□□ 0.55
LIMD2-208ENST00000579814 FXYD6-FXYD2A0A087WZ82 144 aa18.5■□□□□ 0.55
LIMD2-208ENST00000579814 TRBV7-9A0A0J9YWB2 115 aa18.5■□□□□ 0.55
LIMD2-208ENST00000579814 RBAKDNA6NC62 111 aa18.5■□□□□ 0.55
LIMD2-208ENST00000579814 ZNF324O75467 553 aaPredicted RBP18.5■□□□□ 0.55
LIMD2-208ENST00000579814 FAM74A1Q5RGS3 127 aa18.5■□□□□ 0.55
LIMD2-208ENST00000579814 MBP02144 154 aa18.49■□□□□ 0.55
LIMD2-208ENST00000579814 ATP6V0CP27449 155 aa18.49■□□□□ 0.55
LIMD2-208ENST00000579814 SERF2P84101 59 aa18.49■□□□□ 0.55
LIMD2-208ENST00000579814 ZFAND2AQ8N6M9 145 aa18.49■□□□□ 0.55
LIMD2-208ENST00000579814 C15orf53Q8NAA6 179 aa18.49■□□□□ 0.55
LIMD2-208ENST00000579814 CMTM2Q8TAZ6 248 aa18.49■□□□□ 0.55
LIMD2-208ENST00000579814 HYLS1Q96M11 299 aa18.49■□□□□ 0.55
LIMD2-208ENST00000579814 LINC00467Q9BRT7 94 aa18.49■□□□□ 0.55
LIMD2-208ENST00000579814 OTORQ9NRC9 128 aa18.49■□□□□ 0.55
LIMD2-208ENST00000579814 PGPA6NDG6 321 aa18.48■□□□□ 0.55
LIMD2-208ENST00000579814 HMGB3O15347 200 aaKnown RBP18.48■□□□□ 0.55
LIMD2-208ENST00000579814 CDC34P49427 236 aaPredicted RBP18.48■□□□□ 0.55
LIMD2-208ENST00000579814 UBE2DNLQ8IWF7 75 aa18.48■□□□□ 0.55
LIMD2-208ENST00000579814 EIF4E3Q8N5X7 224 aaKnown RBP18.48■□□□□ 0.55
LIMD2-208ENST00000579814 ZNF680Q8NEM1 530 aa18.48■□□□□ 0.55
LIMD2-208ENST00000579814 TNFSF18Q9UNG2 199 aa18.48■□□□□ 0.55
LIMD2-208ENST00000579814 DIRC3C9JPN6 131 aa18.47■□□□□ 0.55
LIMD2-208ENST00000579814 Q8TAT8 98 aa18.47■□□□□ 0.55
LIMD2-208ENST00000579814 BORCS7-ASMTA0A0B4J1R7 106 aa18.46■□□□□ 0.55
LIMD2-208ENST00000579814 RNF222A6NCQ9 220 aa18.46■□□□□ 0.55
LIMD2-208ENST00000579814 DAZ2Q13117 558 aaKnown RBP18.46■□□□□ 0.55
LIMD2-208ENST00000579814 ANXA2RQ3ZCQ2 193 aa18.46■□□□□ 0.55
LIMD2-208ENST00000579814 LINC00612Q8N6U2 182 aa18.46■□□□□ 0.55
LIMD2-208ENST00000579814 EPPK1P58107 5090 aaKnown RBP18.46■□□□□ 0.55
LIMD2-208ENST00000579814 GAGE12BA1L429 117 aa18.45■□□□□ 0.54
LIMD2-208ENST00000579814 RGS13O14921 159 aa18.45■□□□□ 0.54
LIMD2-208ENST00000579814 GAGE7O76087 117 aa18.45■□□□□ 0.54
LIMD2-208ENST00000579814 GAGE12FP0CL80 117 aa18.45■□□□□ 0.54
LIMD2-208ENST00000579814 GAGE12GP0CL81 117 aa18.45■□□□□ 0.54
LIMD2-208ENST00000579814 GAGE12IP0CL82 117 aa18.45■□□□□ 0.54
LIMD2-208ENST00000579814 ARL6IP6Q8N6S5 226 aa18.45■□□□□ 0.54
LIMD2-208ENST00000579814 RAB24Q969Q5 203 aa18.45■□□□□ 0.54
LIMD2-208ENST00000579814 GNPNAT1Q96EK6 184 aaPredicted RBP18.45■□□□□ 0.54
LIMD2-208ENST00000579814 STAG3L2P0CL84 134 aa18.44■□□□□ 0.54
LIMD2-208ENST00000579814 STAG3L3P0CL85 134 aa18.44■□□□□ 0.54
LIMD2-208ENST00000579814 ARL14EPLP0DKL9 152 aa18.44■□□□□ 0.54
LIMD2-208ENST00000579814 RNF212Q495C1 297 aa18.44■□□□□ 0.54
LIMD2-208ENST00000579814 PRR9Q5T870 116 aa18.44■□□□□ 0.54
LIMD2-208ENST00000579814 RPL7L1Q6DKI1 246 aaKnown RBP18.44■□□□□ 0.54
LIMD2-208ENST00000579814 GSN-AS1Q9NRJ2 163 aa18.44■□□□□ 0.54
LIMD2-208ENST00000579814 LENEPQ9Y5L5 61 aa18.44■□□□□ 0.54
LIMD2-208ENST00000579814 ACTR3CQ9C0K3 210 aaPredicted RBP18.43■□□□□ 0.54
LIMD2-208ENST00000579814 SH3BGRL3Q9H299 93 aa18.43■□□□□ 0.54
LIMD2-208ENST00000579814 RPH3ALQ9UNE2 315 aa18.43■□□□□ 0.54
LIMD2-208ENST00000579814 IGHV1OR15-1A0A075B7D0 117 aa18.42■□□□□ 0.54
LIMD2-208ENST00000579814 TMED6Q8WW62 240 aa18.42■□□□□ 0.54
LIMD2-208ENST00000579814 NUDT3O95989 172 aa18.41■□□□□ 0.54
LIMD2-208ENST00000579814 OR5I1Q13606 314 aa18.41■□□□□ 0.54
LIMD2-208ENST00000579814 C11orf72Q8NBR9 251 aa18.41■□□□□ 0.54
LIMD2-208ENST00000579814 GCHFRP30047 84 aa18.4■□□□□ 0.54
LIMD2-208ENST00000579814 GOLT1AQ6ZVE7 132 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms