RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 KIR3DS1Q14943 382 aa17.1■□□□□ 0.33
LIMD2-207ENST00000579329 C9orf47Q6ZRZ4 202 aa17.1■□□□□ 0.33
LIMD2-207ENST00000579329 AGPAT4-IT1Q9H0P7 198 aa17.1■□□□□ 0.33
LIMD2-207ENST00000579329 SH3BGRL3Q9H299 93 aa17.1■□□□□ 0.33
LIMD2-207ENST00000579329 SMLR1H3BR10 107 aa17.09■□□□□ 0.33
LIMD2-207ENST00000579329 J3KRW8 73 aa17.09■□□□□ 0.33
LIMD2-207ENST00000579329 TAAR5O14804 337 aa17.09■□□□□ 0.33
LIMD2-207ENST00000579329 PRM2P04554 102 aa17.09■□□□□ 0.33
LIMD2-207ENST00000579329 TMEM78Q5T7P6 136 aa17.09■□□□□ 0.33
LIMD2-207ENST00000579329 NIPSNAP3BQ9BS92 247 aa17.09■□□□□ 0.33
LIMD2-207ENST00000579329 DEFB131BA0A096LNP1 70 aa17.08■□□□□ 0.32
LIMD2-207ENST00000579329 IGLL5B9A064 214 aa17.08■□□□□ 0.32
LIMD2-207ENST00000579329 SLC25A5P05141 298 aaKnown RBP17.08■□□□□ 0.32
LIMD2-207ENST00000579329 HMGB3O15347 200 aaKnown RBP17.07■□□□□ 0.32
LIMD2-207ENST00000579329 HTN1P15515 57 aa17.07■□□□□ 0.32
LIMD2-207ENST00000579329 AZU1P20160 251 aa17.07■□□□□ 0.32
LIMD2-207ENST00000579329 RXFP4Q8TDU9 374 aa17.07■□□□□ 0.32
LIMD2-207ENST00000579329 C16orf74Q96GX8 76 aa17.07■□□□□ 0.32
LIMD2-207ENST00000579329 FAM19A4Q96LR4 140 aa17.07■□□□□ 0.32
LIMD2-207ENST00000579329 VGLL1Q99990 258 aa17.07■□□□□ 0.32
LIMD2-207ENST00000579329 OTORQ9NRC9 128 aa17.07■□□□□ 0.32
LIMD2-207ENST00000579329 STAG3L2P0CL84 134 aa17.06■□□□□ 0.32
LIMD2-207ENST00000579329 STAG3L3P0CL85 134 aa17.06■□□□□ 0.32
LIMD2-207ENST00000579329 ARL14EPLP0DKL9 152 aa17.06■□□□□ 0.32
LIMD2-207ENST00000579329 RAB24Q969Q5 203 aa17.06■□□□□ 0.32
LIMD2-207ENST00000579329 TRAV12-3A0A0B4J271 114 aa17.05■□□□□ 0.32
LIMD2-207ENST00000579329 C7orf71A4D174 169 aa17.05■□□□□ 0.32
LIMD2-207ENST00000579329 RBAKDNA6NC62 111 aa17.05■□□□□ 0.32
LIMD2-207ENST00000579329 LYRM9A8MSI8 78 aa17.05■□□□□ 0.32
LIMD2-207ENST00000579329 KLLNB2CW77 178 aa17.05■□□□□ 0.32
LIMD2-207ENST00000579329 LY6G6CO95867 125 aa17.05■□□□□ 0.32
LIMD2-207ENST00000579329 CRISP2P16562 243 aa17.05■□□□□ 0.32
LIMD2-207ENST00000579329 FAM74A1Q5RGS3 127 aa17.05■□□□□ 0.32
LIMD2-207ENST00000579329 ZNF493Q6ZR52 646 aa17.05■□□□□ 0.32
LIMD2-207ENST00000579329 TMEM263Q8WUH6 116 aaKnown RBP17.05■□□□□ 0.32
LIMD2-207ENST00000579329 ACTR3CQ9C0K3 210 aaPredicted RBP17.05■□□□□ 0.32
LIMD2-207ENST00000579329 ZNF492Q9P255 531 aa17.05■□□□□ 0.32
LIMD2-207ENST00000579329 PLAC8L1A1L4L8 177 aa17.04■□□□□ 0.32
LIMD2-207ENST00000579329 NMBP08949 121 aa17.04■□□□□ 0.32
LIMD2-207ENST00000579329 DAD1P61803 113 aa17.04■□□□□ 0.32
LIMD2-207ENST00000579329 CCDC28AQ8IWP9 274 aa17.04■□□□□ 0.32
LIMD2-207ENST00000579329 CMTM2Q8TAZ6 248 aa17.04■□□□□ 0.32
LIMD2-207ENST00000579329 IGHV4-4A0A075B6R2 117 aa17.03■□□□□ 0.32
LIMD2-207ENST00000579329 PGPA6NDG6 321 aa17.03■□□□□ 0.32
LIMD2-207ENST00000579329 DIRC3C9JPN6 131 aa17.03■□□□□ 0.32
LIMD2-207ENST00000579329 ZNF138P52744 262 aa17.03■□□□□ 0.32
LIMD2-207ENST00000579329 ZNF345Q14585 488 aa17.03■□□□□ 0.32
LIMD2-207ENST00000579329 RNASE8Q8TDE3 154 aaKnown RBP17.03■□□□□ 0.32
LIMD2-207ENST00000579329 HYLS1Q96M11 299 aa17.03■□□□□ 0.32
LIMD2-207ENST00000579329 PYGO2Q9BRQ0 406 aa17.03■□□□□ 0.32
LIMD2-207ENST00000579329 CYTL1Q9NRR1 136 aa17.03■□□□□ 0.32
LIMD2-207ENST00000579329 PLA2G2EQ9NZK7 142 aa17.03■□□□□ 0.32
LIMD2-207ENST00000579329 APLNQ9ULZ1 77 aa17.03■□□□□ 0.32
LIMD2-207ENST00000579329 FRAS1Q86XX4 4008 aa17.03■□□□□ 0.32
LIMD2-207ENST00000579329 TRBV7-9A0A0J9YWB2 115 aa17.02■□□□□ 0.32
LIMD2-207ENST00000579329 GPX1P07203 203 aa17.02■□□□□ 0.32
LIMD2-207ENST00000579329 GCHFRP30047 84 aa17.02■□□□□ 0.32
LIMD2-207ENST00000579329 KCNRGQ8N5I3 272 aa17.02■□□□□ 0.32
LIMD2-207ENST00000579329 HMSDA8MTL9 139 aa17.01■□□□□ 0.31
LIMD2-207ENST00000579329 BTN1A1Q13410 526 aa17.01■□□□□ 0.31
LIMD2-207ENST00000579329 LGALS9CQ6DKI2 356 aa17.01■□□□□ 0.31
LIMD2-207ENST00000579329 ZFAND2AQ8N6M9 145 aa17.01■□□□□ 0.31
LIMD2-207ENST00000579329 ARL6IP6Q8N6S5 226 aa17.01■□□□□ 0.31
LIMD2-207ENST00000579329 Q8TAT8 98 aa17.01■□□□□ 0.31
LIMD2-207ENST00000579329 ARPC5LQ9BPX5 153 aa17.01■□□□□ 0.31
LIMD2-207ENST00000579329 TIMM8BQ9Y5J9 83 aaPredicted RBP17.01■□□□□ 0.31
LIMD2-207ENST00000579329 CXorf1O96002 111 aa17■□□□□ 0.31
LIMD2-207ENST00000579329 RNASE4P34096 147 aaKnown RBP17■□□□□ 0.31
LIMD2-207ENST00000579329 CD300CQ08708 224 aa17■□□□□ 0.31
LIMD2-207ENST00000579329 AKR1C8PQ5T2L2 129 aa17■□□□□ 0.31
LIMD2-207ENST00000579329 OR11H4Q8NGC9 324 aa17■□□□□ 0.31
LIMD2-207ENST00000579329 TMEM167BQ9NRX6 74 aa17■□□□□ 0.31
LIMD2-207ENST00000579329 RPH3ALQ9UNE2 315 aa17■□□□□ 0.31
LIMD2-207ENST00000579329 SUN5Q8TC36 379 aa16.99■□□□□ 0.31
LIMD2-207ENST00000579329 CTXND1A0A1B0GTU2 59 aa16.98■□□□□ 0.31
LIMD2-207ENST00000579329 ZNF324O75467 553 aaPredicted RBP16.98■□□□□ 0.31
LIMD2-207ENST00000579329 DEFB130BP0DP73 79 aa16.98■□□□□ 0.31
LIMD2-207ENST00000579329 DEFB130AP0DP74 79 aa16.98■□□□□ 0.31
LIMD2-207ENST00000579329 HTN3P15516 51 aa16.98■□□□□ 0.31
LIMD2-207ENST00000579329 SSX7Q7RTT5 188 aa16.98■□□□□ 0.31
LIMD2-207ENST00000579329 TMED6Q8WW62 240 aa16.98■□□□□ 0.31
LIMD2-207ENST00000579329 LINC00467Q9BRT7 94 aa16.98■□□□□ 0.31
LIMD2-207ENST00000579329 LENEPQ9Y5L5 61 aa16.98■□□□□ 0.31
LIMD2-207ENST00000579329 A0A0D9SG52 128 aa16.97■□□□□ 0.31
LIMD2-207ENST00000579329 PRR9Q5T870 116 aa16.97■□□□□ 0.31
LIMD2-207ENST00000579329 ST6GAL2Q96JF0 529 aa16.97■□□□□ 0.31
LIMD2-207ENST00000579329 FAM210BQ96KR6 192 aa16.97■□□□□ 0.31
LIMD2-207ENST00000579329 NDUFAF3Q9BU61 184 aa16.97■□□□□ 0.31
LIMD2-207ENST00000579329 NOP10Q9NPE3 64 aaKnown RBP16.97■□□□□ 0.31
LIMD2-207ENST00000579329 SNURFLB1AK76 121 aa16.96■□□□□ 0.31
LIMD2-207ENST00000579329 ZNF726P1Q15940 193 aa16.96■□□□□ 0.31
LIMD2-207ENST00000579329 GOLT1AQ6ZVE7 132 aa16.96■□□□□ 0.31
LIMD2-207ENST00000579329 IQCF2Q8IXL9 164 aa16.96■□□□□ 0.31
LIMD2-207ENST00000579329 GNG5P63218 68 aa16.95■□□□□ 0.3
LIMD2-207ENST00000579329 EIF4E3Q8N5X7 224 aaKnown RBP16.95■□□□□ 0.3
LIMD2-207ENST00000579329 C5orf17Q8NAS9 161 aa16.95■□□□□ 0.3
LIMD2-207ENST00000579329 ZNF680Q8NEM1 530 aa16.95■□□□□ 0.3
LIMD2-207ENST00000579329 SERTM2A0A1B0GWG4 89 aa16.94■□□□□ 0.3
LIMD2-207ENST00000579329 KANTRA0A1W2PQU2 76 aa16.94■□□□□ 0.3
LIMD2-207ENST00000579329 BCL2L11O43521 198 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms