RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 UBE2L3P68036 154 aaKnown RBP10.51□□□□□ -0.73
SS18-212ENST00000579061 ERCC8Q13216 396 aa10.51□□□□□ -0.73
SS18-212ENST00000579061 FAM122CQ6P4D5 195 aa10.51□□□□□ -0.73
SS18-212ENST00000579061 PQLC2Q6ZP29 291 aa10.51□□□□□ -0.73
SS18-212ENST00000579061 PHYHIPLQ96FC7 376 aa10.51□□□□□ -0.73
SS18-212ENST00000579061 TRAV12-3A0A0B4J271 114 aa10.5□□□□□ -0.73
SS18-212ENST00000579061 TRBV7-9A0A0J9YWB2 115 aa10.5□□□□□ -0.73
SS18-212ENST00000579061 A0A1W2PPV4 95 aa10.5□□□□□ -0.73
SS18-212ENST00000579061 C7orf71A4D174 169 aa10.5□□□□□ -0.73
SS18-212ENST00000579061 HTN3P15516 51 aa10.5□□□□□ -0.73
SS18-212ENST00000579061 CSN1S1P47710 185 aa10.5□□□□□ -0.73
SS18-212ENST00000579061 TMEM78Q5T7P6 136 aa10.5□□□□□ -0.73
SS18-212ENST00000579061 OR2G3Q8NGZ4 309 aa10.5□□□□□ -0.73
SS18-212ENST00000579061 LINC00467Q9BRT7 94 aa10.5□□□□□ -0.73
SS18-212ENST00000579061 PSMG3Q9BT73 122 aaPredicted RBP10.5□□□□□ -0.73
SS18-212ENST00000579061 RBAKDNA6NC62 111 aa10.49□□□□□ -0.73
SS18-212ENST00000579061 CBY3A6NI87 242 aa10.49□□□□□ -0.73
SS18-212ENST00000579061 J3KRW8 73 aa10.49□□□□□ -0.73
SS18-212ENST00000579061 DEFB130BP0DP73 79 aa10.49□□□□□ -0.73
SS18-212ENST00000579061 DEFB130AP0DP74 79 aa10.49□□□□□ -0.73
SS18-212ENST00000579061 RANP62826 216 aaKnown RBP10.49□□□□□ -0.73
SS18-212ENST00000579061 Q5BKY6 102 aa10.49□□□□□ -0.73
SS18-212ENST00000579061 POM121L12Q8N7R1 296 aa10.49□□□□□ -0.73
SS18-212ENST00000579061 Q9H3A6 140 aa10.49□□□□□ -0.73
SS18-212ENST00000579061 ZNF492Q9P255 531 aa10.49□□□□□ -0.73
SS18-212ENST00000579061 IGKV2-40A0A087WW87 121 aaPredicted RBP10.48□□□□□ -0.73
SS18-212ENST00000579061 ZNF324O75467 553 aaPredicted RBP10.48□□□□□ -0.73
SS18-212ENST00000579061 IGKV2D-40P01614 121 aaPredicted RBP10.48□□□□□ -0.73
SS18-212ENST00000579061 ATP5G1P05496 136 aa10.48□□□□□ -0.73
SS18-212ENST00000579061 ATP5G3P48201 142 aa10.48□□□□□ -0.73
SS18-212ENST00000579061 RAB2AP61019 212 aa10.48□□□□□ -0.73
SS18-212ENST00000579061 SERF2P84101 59 aa10.48□□□□□ -0.73
SS18-212ENST00000579061 ARL6IP6Q8N6S5 226 aa10.48□□□□□ -0.73
SS18-212ENST00000579061 LINC00612Q8N6U2 182 aa10.48□□□□□ -0.73
SS18-212ENST00000579061 C15orf53Q8NAA6 179 aa10.48□□□□□ -0.73
SS18-212ENST00000579061 INO80EQ8NBZ0 244 aaPredicted RBP10.48□□□□□ -0.73
SS18-212ENST00000579061 OR10G4Q8NGN3 311 aa10.48□□□□□ -0.73
SS18-212ENST00000579061 OR10G9Q8NGN4 311 aa10.48□□□□□ -0.73
SS18-212ENST00000579061 OR10G7Q8NGN6 311 aa10.48□□□□□ -0.73
SS18-212ENST00000579061 RXFP4Q8TDU9 374 aa10.48□□□□□ -0.73
SS18-212ENST00000579061 VGLL1Q99990 258 aa10.48□□□□□ -0.73
SS18-212ENST00000579061 NOP10Q9NPE3 64 aaKnown RBP10.48□□□□□ -0.73
SS18-212ENST00000579061 SNURFLB1AK76 121 aa10.47□□□□□ -0.73
SS18-212ENST00000579061 MBP02144 154 aa10.47□□□□□ -0.73
SS18-212ENST00000579061 GPX1P07203 203 aa10.47□□□□□ -0.73
SS18-212ENST00000579061 ATP6V0CP27449 155 aa10.47□□□□□ -0.73
SS18-212ENST00000579061 ZNF138P52744 262 aa10.47□□□□□ -0.73
SS18-212ENST00000579061 FAM74A1Q5RGS3 127 aa10.47□□□□□ -0.73
SS18-212ENST00000579061 TMEM88Q6PEY1 159 aa10.47□□□□□ -0.73
SS18-212ENST00000579061 ZFAND2AQ8N6M9 145 aa10.47□□□□□ -0.73
SS18-212ENST00000579061 HSD17B11Q8NBQ5 300 aa10.47□□□□□ -0.73
SS18-212ENST00000579061 OTORQ9NRC9 128 aa10.47□□□□□ -0.73
SS18-212ENST00000579061 DNAH10Q8IVF4 4471 aa10.46□□□□□ -0.73
SS18-212ENST00000579061 RNF222A6NCQ9 220 aa10.46□□□□□ -0.73
SS18-212ENST00000579061 DIRC3C9JPN6 131 aa10.46□□□□□ -0.73
SS18-212ENST00000579061 RNASE4P34096 147 aaKnown RBP10.46□□□□□ -0.73
SS18-212ENST00000579061 CDC34P49427 236 aaPredicted RBP10.46□□□□□ -0.73
SS18-212ENST00000579061 CD300CQ08708 224 aa10.46□□□□□ -0.73
SS18-212ENST00000579061 DAZ2Q13117 558 aaKnown RBP10.46□□□□□ -0.73
SS18-212ENST00000579061 BTN1A1Q13410 526 aa10.46□□□□□ -0.73
SS18-212ENST00000579061 ANXA2RQ3ZCQ2 193 aa10.46□□□□□ -0.73
SS18-212ENST00000579061 EIF4E3Q8N5X7 224 aaKnown RBP10.46□□□□□ -0.73
SS18-212ENST00000579061 ZNF680Q8NEM1 530 aa10.46□□□□□ -0.73
SS18-212ENST00000579061 OR2T35Q8NGX2 323 aa10.46□□□□□ -0.73
SS18-212ENST00000579061 TNFSF18Q9UNG2 199 aa10.46□□□□□ -0.73
SS18-212ENST00000579061 LENEPQ9Y5L5 61 aa10.46□□□□□ -0.73
SS18-212ENST00000579061 EPPK1P58107 5090 aaKnown RBP10.45□□□□□ -0.74
SS18-212ENST00000579061 FXYD6-FXYD2A0A087WZ82 144 aa10.45□□□□□ -0.74
SS18-212ENST00000579061 F5H768 121 aa10.45□□□□□ -0.74
SS18-212ENST00000579061 STAG3L2P0CL84 134 aa10.45□□□□□ -0.74
SS18-212ENST00000579061 STAG3L3P0CL85 134 aa10.45□□□□□ -0.74
SS18-212ENST00000579061 RNF212Q495C1 297 aa10.45□□□□□ -0.74
SS18-212ENST00000579061 TMED6Q8WW62 240 aa10.45□□□□□ -0.74
SS18-212ENST00000579061 GNPNAT1Q96EK6 184 aaPredicted RBP10.45□□□□□ -0.74
SS18-212ENST00000579061 FRAS1Q86XX4 4008 aa10.44□□□□□ -0.74
SS18-212ENST00000579061 BORCS7-ASMTA0A0B4J1R7 106 aa10.44□□□□□ -0.74
SS18-212ENST00000579061 PGPA6NDG6 321 aa10.44□□□□□ -0.74
SS18-212ENST00000579061 EIF3GO75821 320 aaKnown RBP eCLIP10.44□□□□□ -0.74
SS18-212ENST00000579061 NACAE9PAV3 2078 aa10.43□□□□□ -0.74
SS18-212ENST00000579061 ARL14EPLP0DKL9 152 aa10.43□□□□□ -0.74
SS18-212ENST00000579061 IBA57Q5T440 356 aaKnown RBP10.43□□□□□ -0.74
SS18-212ENST00000579061 PRR9Q5T870 116 aa10.43□□□□□ -0.74
SS18-212ENST00000579061 UBE2DNLQ8IWF7 75 aa10.43□□□□□ -0.74
SS18-212ENST00000579061 C11orf72Q8NBR9 251 aa10.43□□□□□ -0.74
SS18-212ENST00000579061 Q8TAT8 98 aa10.43□□□□□ -0.74
SS18-212ENST00000579061 CMTM2Q8TAZ6 248 aa10.43□□□□□ -0.74
SS18-212ENST00000579061 SUN5Q8TC36 379 aa10.43□□□□□ -0.74
SS18-212ENST00000579061 RAB24Q969Q5 203 aa10.43□□□□□ -0.74
SS18-212ENST00000579061 C18orf15Q96N68 181 aa10.43□□□□□ -0.74
SS18-212ENST00000579061 IGHV1OR15-1A0A075B7D0 117 aa10.42□□□□□ -0.74
SS18-212ENST00000579061 G3V3Q6 166 aa10.42□□□□□ -0.74
SS18-212ENST00000579061 RGS13O14921 159 aa10.42□□□□□ -0.74
SS18-212ENST00000579061 TCL1AP56279 114 aa10.42□□□□□ -0.74
SS18-212ENST00000579061 FAM3BP58499 235 aaPredicted RBP10.42□□□□□ -0.74
SS18-212ENST00000579061 RPL7L1Q6DKI1 246 aaKnown RBP10.42□□□□□ -0.74
SS18-212ENST00000579061 HYLS1Q96M11 299 aa10.42□□□□□ -0.74
SS18-212ENST00000579061 BIRC6Q9NR09 4857 aa10.41□□□□□ -0.74
SS18-212ENST00000579061 MUC4Q99102 2169 aa10.41□□□□□ -0.74
SS18-212ENST00000579061 GAGE12BA1L429 117 aa10.41□□□□□ -0.74
SS18-212ENST00000579061 TAAR5O14804 337 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms