RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 ZNF705DP0CH99 300 aaPredicted RBP2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 ZNF705BP0CI00 300 aaPredicted RBP2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 TPT1P13693 172 aaKnown RBP2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 GCHFRP30047 84 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 SULT1A2P50226 295 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 CNN1P51911 297 aaKnown RBP2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 UBE2L3P68036 154 aaKnown RBP2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 CCL20P78556 96 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 ACOT6Q3I5F7 207 aaPredicted RBP2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 KHDC3LQ587J8 217 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 FAM74A1Q5RGS3 127 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 PRR9Q5T870 116 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 SAMD13Q5VXD3 122 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 PQLC2Q6ZP29 291 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 SLC51BQ86UW2 128 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 C1orf158Q8N1D5 194 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 EXOC3-AS1Q8N2X6 119 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 OR8A1Q8NGG7 326 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 LYPD6BQ8NI32 183 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 TVP23CQ96ET8 276 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 OVOL2Q9BRP0 275 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 PAXXQ9BUH6 204 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 ZNF471Q9BX82 626 aaPredicted RBP2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 SLC35B3Q9H1N7 401 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 EDA2RQ9HAV5 297 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 PFDN2Q9UHV9 154 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 YTHDF2Q9Y5A9 579 aaKnown RBP2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 HYDINQ4G0P3 5121 aa2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 KMT2CQ8NEZ4 4911 aaKnown RBP2.74□□□□□ -1.97
SMARCE1-215ENST00000578995 RYR2Q92736 4967 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 IGKV2-40A0A087WW87 121 aaPredicted RBP2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 LOC102724200A0A096LPH7 203 aaPredicted RBP2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 KANTRA0A1W2PQU2 76 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 PLAC8L1A1L4L8 177 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 MAP1LC3B2A6NCE7 125 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 FAM74A7A6NL05 159 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 ZNF705EA8MWA4 302 aaPredicted RBP2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 KLLNB2CW77 178 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 UMAD1C9J7I0 102 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 DNASE2O00115 360 aaPredicted RBP2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 OR7C2O60412 319 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 IGKV2D-40P01614 121 aaPredicted RBP2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 MBP02144 154 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 CT45A10P0DMU9 189 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 CRISP2P16562 243 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 RPL35AP18077 110 aaKnown RBP2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 ATF4P18848 351 aaPredicted RBP2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 FGF8P55075 233 aaPredicted RBP2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 CMC4P56277 68 aaPredicted RBP2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 SNRPD3P62318 126 aaKnown RBP2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 PAFAH1B2P68402 229 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 IFITM2Q01629 132 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 PMS2P11Q13670 270 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 ACTL10Q5JWF8 245 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 DPPA3Q6W0C5 159 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 ZNF705AQ6ZN79 300 aaPredicted RBP2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 Q6ZQT7 251 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 C9orf47Q6ZRZ4 202 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 Q6ZWC4 215 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 LYPD1Q8N2G4 141 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 ZFAND2AQ8N6M9 145 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 ARL6IP6Q8N6S5 226 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 Q8NAQ8 132 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 PPP1R14BQ96C90 147 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 RPUSD4Q96CM3 377 aaKnown RBP2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 RNF183Q96D59 192 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 C16orf92Q96LL3 132 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 ODF3Q96PU9 254 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 ASCL2Q99929 193 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 VGLL1Q99990 258 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 ACTR3CQ9C0K3 210 aaPredicted RBP2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 MAP1LC3BQ9GZQ8 125 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 AGPAT4-IT1Q9H0P7 198 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 Q9H3A6 140 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 PPP1R14DQ9NXH3 145 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 RNF24Q9Y225 148 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 TP53TG1Q9Y2A0 90 aa2.73□□□□□ -1.97
SMARCE1-215ENST00000578995 A0A1W2PPV4 95 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 A0A1W2PRE2 83 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 RBAKDNA6NC62 111 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 DIRC3C9JPN6 131 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 M0R2Z0 102 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 UBE2CO00762 179 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 PFDN1O60925 122 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 ZNF324O75467 553 aaPredicted RBP2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 CXorf1O96002 111 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 TCRAP04437 139 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 SLC25A5P05141 298 aaKnown RBP2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 S100A7P31151 101 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 ID1P41134 155 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 ATP5G3P48201 142 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 TAS2R45P59539 299 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 RANP62826 216 aaKnown RBP2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 GNG5P63218 68 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 PSG9Q00887 426 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 ERCC8Q13216 396 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 DEFB135Q30KP9 77 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 AKR1C8PQ5T2L2 129 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 GFI1BQ5VTD9 330 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 MORN3Q6PF18 240 aaPredicted RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms