RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 FXYD6-FXYD2A0A087WZ82 144 aa9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 TRBV7-9A0A0J9YWB2 115 aa9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 KLLNB2CW77 178 aa9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 G3V3Q6 166 aa9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 MBP02144 154 aa9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 CRISP2P16562 243 aa9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 ATP6V0CP27449 155 aa9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 CSN1S1P47710 185 aa9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 RANP62826 216 aaKnown RBP9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 ERCC8Q13216 396 aa9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 HSD17B11Q8NBQ5 300 aa9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 OR10G4Q8NGN3 311 aa9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 OR10G9Q8NGN4 311 aa9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 OR10G7Q8NGN6 311 aa9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 RNASE8Q8TDE3 154 aaKnown RBP9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 TMEM263Q8WUH6 116 aaKnown RBP9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 Q9H3A6 140 aa9.7□□□□□ -0.86
CSNK1D-208ENST00000578501 RBAKDNA6NC62 111 aa9.69□□□□□ -0.86
CSNK1D-208ENST00000578501 RAB2AP61019 212 aa9.69□□□□□ -0.86
CSNK1D-208ENST00000578501 DAD1P61803 113 aa9.69□□□□□ -0.86
CSNK1D-208ENST00000578501 TMEM78Q5T7P6 136 aa9.69□□□□□ -0.86
CSNK1D-208ENST00000578501 ARL6IP6Q8N6S5 226 aa9.69□□□□□ -0.86
CSNK1D-208ENST00000578501 PYGO2Q9BRQ0 406 aa9.69□□□□□ -0.86
CSNK1D-208ENST00000578501 ZNF492Q9P255 531 aa9.69□□□□□ -0.86
CSNK1D-208ENST00000578501 FRAS1Q86XX4 4008 aa9.68□□□□□ -0.86
CSNK1D-208ENST00000578501 IGKV2-40A0A087WW87 121 aaPredicted RBP9.68□□□□□ -0.86
CSNK1D-208ENST00000578501 BORCS7-ASMTA0A0B4J1R7 106 aa9.68□□□□□ -0.86
CSNK1D-208ENST00000578501 TRAV12-3A0A0B4J271 114 aa9.68□□□□□ -0.86
CSNK1D-208ENST00000578501 IGKV2D-40P01614 121 aaPredicted RBP9.68□□□□□ -0.86
CSNK1D-208ENST00000578501 HTN1P15515 57 aa9.68□□□□□ -0.86
CSNK1D-208ENST00000578501 CCDC28AQ8IWP9 274 aa9.68□□□□□ -0.86
CSNK1D-208ENST00000578501 RXFP4Q8TDU9 374 aa9.68□□□□□ -0.86
CSNK1D-208ENST00000578501 GNPNAT1Q96EK6 184 aaPredicted RBP9.68□□□□□ -0.86
CSNK1D-208ENST00000578501 VGLL1Q99990 258 aa9.68□□□□□ -0.86
CSNK1D-208ENST00000578501 NDUFAF3Q9BU61 184 aa9.68□□□□□ -0.86
CSNK1D-208ENST00000578501 OTORQ9NRC9 128 aa9.68□□□□□ -0.86
CSNK1D-208ENST00000578501 PLA2G2EQ9NZK7 142 aa9.68□□□□□ -0.86
CSNK1D-208ENST00000578501 TIMM8BQ9Y5J9 83 aaPredicted RBP9.68□□□□□ -0.86
CSNK1D-208ENST00000578501 C7orf71A4D174 169 aa9.67□□□□□ -0.86
CSNK1D-208ENST00000578501 TAAR5O14804 337 aa9.67□□□□□ -0.86
CSNK1D-208ENST00000578501 ZNF324O75467 553 aaPredicted RBP9.67□□□□□ -0.86
CSNK1D-208ENST00000578501 STAG3L2P0CL84 134 aa9.67□□□□□ -0.86
CSNK1D-208ENST00000578501 STAG3L3P0CL85 134 aa9.67□□□□□ -0.86
CSNK1D-208ENST00000578501 CDC34P49427 236 aaPredicted RBP9.67□□□□□ -0.86
CSNK1D-208ENST00000578501 ZNF138P52744 262 aa9.67□□□□□ -0.86
CSNK1D-208ENST00000578501 FAM74A1Q5RGS3 127 aa9.67□□□□□ -0.86
CSNK1D-208ENST00000578501 RPL7L1Q6DKI1 246 aaKnown RBP9.67□□□□□ -0.86
CSNK1D-208ENST00000578501 SUN5Q8TC36 379 aa9.67□□□□□ -0.86
CSNK1D-208ENST00000578501 LINC00467Q9BRT7 94 aa9.67□□□□□ -0.86
CSNK1D-208ENST00000578501 DIRC3C9JPN6 131 aa9.66□□□□□ -0.86
CSNK1D-208ENST00000578501 J3KRW8 73 aa9.66□□□□□ -0.86
CSNK1D-208ENST00000578501 GPX1P07203 203 aa9.66□□□□□ -0.86
CSNK1D-208ENST00000578501 CD300CQ08708 224 aa9.66□□□□□ -0.86
CSNK1D-208ENST00000578501 ZFAND2AQ8N6M9 145 aa9.66□□□□□ -0.86
CSNK1D-208ENST00000578501 TMED6Q8WW62 240 aa9.66□□□□□ -0.86
CSNK1D-208ENST00000578501 RAB24Q969Q5 203 aa9.66□□□□□ -0.86
CSNK1D-208ENST00000578501 SH3BGRL3Q9H299 93 aa9.66□□□□□ -0.86
CSNK1D-208ENST00000578501 LENEPQ9Y5L5 61 aa9.66□□□□□ -0.86
CSNK1D-208ENST00000578501 PGPA6NDG6 321 aa9.65□□□□□ -0.86
CSNK1D-208ENST00000578501 CBY3A6NI87 242 aa9.65□□□□□ -0.86
CSNK1D-208ENST00000578501 HMGB3O15347 200 aaKnown RBP9.65□□□□□ -0.86
CSNK1D-208ENST00000578501 ARPC5O15511 151 aa9.65□□□□□ -0.86
CSNK1D-208ENST00000578501 EIF3GO75821 320 aaKnown RBP eCLIP9.65□□□□□ -0.86
CSNK1D-208ENST00000578501 ARL14EPLP0DKL9 152 aa9.65□□□□□ -0.86
CSNK1D-208ENST00000578501 RNASE4P34096 147 aaKnown RBP9.65□□□□□ -0.86
CSNK1D-208ENST00000578501 ACTR3CQ9C0K3 210 aaPredicted RBP9.65□□□□□ -0.86
CSNK1D-208ENST00000578501 CXorf1O96002 111 aa9.64□□□□□ -0.87
CSNK1D-208ENST00000578501 DEFB130BP0DP73 79 aa9.64□□□□□ -0.87
CSNK1D-208ENST00000578501 DEFB130AP0DP74 79 aa9.64□□□□□ -0.87
CSNK1D-208ENST00000578501 GCHFRP30047 84 aa9.64□□□□□ -0.87
CSNK1D-208ENST00000578501 DAZ2Q13117 558 aaKnown RBP9.64□□□□□ -0.87
CSNK1D-208ENST00000578501 BTN1A1Q13410 526 aa9.64□□□□□ -0.87
CSNK1D-208ENST00000578501 ZNF345Q14585 488 aa9.64□□□□□ -0.87
CSNK1D-208ENST00000578501 ANXA2RQ3ZCQ2 193 aa9.64□□□□□ -0.87
CSNK1D-208ENST00000578501 LINC00612Q8N6U2 182 aa9.64□□□□□ -0.87
CSNK1D-208ENST00000578501 ZNF680Q8NEM1 530 aa9.64□□□□□ -0.87
CSNK1D-208ENST00000578501 CMTM2Q8TAZ6 248 aa9.64□□□□□ -0.87
CSNK1D-208ENST00000578501 HYLS1Q96M11 299 aa9.64□□□□□ -0.87
CSNK1D-208ENST00000578501 NOP10Q9NPE3 64 aaKnown RBP9.64□□□□□ -0.87
CSNK1D-208ENST00000578501 VPS13DQ5THJ4 4388 aa9.63□□□□□ -0.87
CSNK1D-208ENST00000578501 PCLOQ9Y6V0 5065 aa9.63□□□□□ -0.87
CSNK1D-208ENST00000578501 HMSDA8MTL9 139 aa9.63□□□□□ -0.87
CSNK1D-208ENST00000578501 SNURFLB1AK76 121 aa9.63□□□□□ -0.87
CSNK1D-208ENST00000578501 P0DMU3 169 aa9.63□□□□□ -0.87
CSNK1D-208ENST00000578501 FAM231AP0DMU4 169 aa9.63□□□□□ -0.87
CSNK1D-208ENST00000578501 FAM231CP0DMU5 169 aa9.63□□□□□ -0.87
CSNK1D-208ENST00000578501 HTN3P15516 51 aa9.63□□□□□ -0.87
CSNK1D-208ENST00000578501 EIF4E3Q8N5X7 224 aaKnown RBP9.63□□□□□ -0.87
CSNK1D-208ENST00000578501 Q8TAT8 98 aa9.63□□□□□ -0.87
CSNK1D-208ENST00000578501 ST6GAL2Q96JF0 529 aa9.63□□□□□ -0.87
CSNK1D-208ENST00000578501 CYTL1Q9NRR1 136 aa9.63□□□□□ -0.87
CSNK1D-208ENST00000578501 TMEM167BQ9NRX6 74 aa9.63□□□□□ -0.87
CSNK1D-208ENST00000578501 KMT2AQ03164 3969 aa9.63□□□□□ -0.87
CSNK1D-208ENST00000578501 SERTM2A0A1B0GWG4 89 aa9.62□□□□□ -0.87
CSNK1D-208ENST00000578501 SMLR1H3BR10 107 aa9.62□□□□□ -0.87
CSNK1D-208ENST00000578501 ATP5G1P05496 136 aa9.62□□□□□ -0.87
CSNK1D-208ENST00000578501 ATP5G3P48201 142 aa9.62□□□□□ -0.87
CSNK1D-208ENST00000578501 PRR9Q5T870 116 aa9.62□□□□□ -0.87
CSNK1D-208ENST00000578501 KCNRGQ8N5I3 272 aa9.62□□□□□ -0.87
CSNK1D-208ENST00000578501 C11orf72Q8NBR9 251 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms