RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 COL4A4P53420 1690 aaPredicted RBP9.61□□□□□ -0.87
ERBB2-206ENST00000578373 TRBV19A0A075B6N1 114 aa9.61□□□□□ -0.87
ERBB2-206ENST00000578373 TRAV2A0A0B4J234 112 aa9.61□□□□□ -0.87
ERBB2-206ENST00000578373 TRAV26-2A0A0B4J265 109 aa9.61□□□□□ -0.87
ERBB2-206ENST00000578373 FNDC10F2Z333 226 aa9.61□□□□□ -0.87
ERBB2-206ENST00000578373 PROP1O75360 226 aa9.61□□□□□ -0.87
ERBB2-206ENST00000578373 ZC2HC1AQ96GY0 325 aa9.61□□□□□ -0.87
ERBB2-206ENST00000578373 CHTOPQ9Y3Y2 248 aaKnown RBP9.61□□□□□ -0.87
ERBB2-206ENST00000578373 KMT2EQ8IZD2 1858 aa9.61□□□□□ -0.87
ERBB2-206ENST00000578373 H7C1H1 209 aa9.6□□□□□ -0.87
ERBB2-206ENST00000578373 KRTAP27-1Q3LI81 207 aa9.6□□□□□ -0.87
ERBB2-206ENST00000578373 MAPK1IP1LQ8NDC0 245 aa9.6□□□□□ -0.87
ERBB2-206ENST00000578373 SEC11AP67812 179 aa9.6□□□□□ -0.87
ERBB2-206ENST00000578373 RUSC1-AS1Q66K80 236 aa9.6□□□□□ -0.87
ERBB2-206ENST00000578373 FN1P02751 2386 aaKnown RBP9.6□□□□□ -0.87
ERBB2-206ENST00000578373 ZNF295-AS1Q8N0V1 137 aa9.6□□□□□ -0.87
ERBB2-206ENST00000578373 SMIM27A0A1W2PRY6 76 aa9.59□□□□□ -0.87
ERBB2-206ENST00000578373 IGLC1P0CG04 106 aa9.59□□□□□ -0.87
ERBB2-206ENST00000578373 MRPL36Q9P0J6 103 aaKnown RBP9.59□□□□□ -0.87
ERBB2-206ENST00000578373 HCFC1P51610 2035 aa9.59□□□□□ -0.87
ERBB2-206ENST00000578373 LAGE3Q14657 143 aa9.59□□□□□ -0.87
ERBB2-206ENST00000578373 KIAA1549Q9HCM3 1950 aa9.59□□□□□ -0.87
ERBB2-206ENST00000578373 ATP6V0E1O15342 81 aa9.59□□□□□ -0.87
ERBB2-206ENST00000578373 VCX2Q9H322 139 aa9.59□□□□□ -0.87
ERBB2-206ENST00000578373 MOB4Q9Y3A3 225 aa9.59□□□□□ -0.87
ERBB2-206ENST00000578373 MTORP42345 2549 aa9.59□□□□□ -0.87
ERBB2-206ENST00000578373 IL17RELQ6ZVW7 336 aa9.59□□□□□ -0.87
ERBB2-206ENST00000578373 C11orf1Q9H5F2 150 aa9.59□□□□□ -0.87
ERBB2-206ENST00000578373 FAM231BA6NCW3 169 aa9.58□□□□□ -0.88
ERBB2-206ENST00000578373 TNFRSF6BO95407 300 aa9.58□□□□□ -0.88
ERBB2-206ENST00000578373 PRTN3P24158 256 aa9.58□□□□□ -0.88
ERBB2-206ENST00000578373 VGLL1Q99990 258 aa9.58□□□□□ -0.88
ERBB2-206ENST00000578373 TMEM8BA6NDV4 472 aa9.58□□□□□ -0.88
ERBB2-206ENST00000578373 OVOL3O00110 214 aa9.58□□□□□ -0.88
ERBB2-206ENST00000578373 IGHV4-39P01824 125 aa9.58□□□□□ -0.88
ERBB2-206ENST00000578373 BRWD1-AS2P59051 145 aa9.58□□□□□ -0.88
ERBB2-206ENST00000578373 PLA2G2CQ5R387 149 aa9.58□□□□□ -0.88
ERBB2-206ENST00000578373 PATE2Q6UY27 113 aa9.58□□□□□ -0.88
ERBB2-206ENST00000578373 ZNF562Q6V9R5 426 aa9.58□□□□□ -0.88
ERBB2-206ENST00000578373 GTSF1LQ9H1H1 148 aa9.58□□□□□ -0.88
ERBB2-206ENST00000578373 PF4P02776 101 aa9.58□□□□□ -0.88
ERBB2-206ENST00000578373 COA6Q5JTJ3 125 aaKnown RBP9.58□□□□□ -0.88
ERBB2-206ENST00000578373 NEGR1Q7Z3B1 354 aa9.58□□□□□ -0.88
ERBB2-206ENST00000578373 IGLC7A0M8Q6 106 aa9.57□□□□□ -0.88
ERBB2-206ENST00000578373 CEACAM8P31997 349 aaPredicted RBP9.57□□□□□ -0.88
ERBB2-206ENST00000578373 TEX43Q6ZNM6 134 aa9.57□□□□□ -0.88
ERBB2-206ENST00000578373 MRPS16Q9Y3D3 137 aaKnown RBP9.57□□□□□ -0.88
ERBB2-206ENST00000578373 TRGV2A0A075B6R0 118 aa9.57□□□□□ -0.88
ERBB2-206ENST00000578373 C22orf46C9J442 243 aa9.57□□□□□ -0.88
ERBB2-206ENST00000578373 POLQO75417 2590 aa9.57□□□□□ -0.88
ERBB2-206ENST00000578373 HOXA3O43365 443 aaPredicted RBP9.57□□□□□ -0.88
ERBB2-206ENST00000578373 DNAL4O96015 105 aa9.57□□□□□ -0.88
ERBB2-206ENST00000578373 SCGB1A1P11684 91 aa9.57□□□□□ -0.88
ERBB2-206ENST00000578373 MRPL51Q4U2R6 128 aaKnown RBP9.57□□□□□ -0.88
ERBB2-206ENST00000578373 FAM120AOSQ5T036 256 aa9.57□□□□□ -0.88
ERBB2-206ENST00000578373 FAM104BQ5XKR9 115 aa9.57□□□□□ -0.88
ERBB2-206ENST00000578373 LINC00477Q96M19 166 aa9.57□□□□□ -0.88
ERBB2-206ENST00000578373 NPYP01303 97 aa9.57□□□□□ -0.88
ERBB2-206ENST00000578373 PRSS33Q8NF86 280 aa9.57□□□□□ -0.88
ERBB2-206ENST00000578373 LRRK2Q5S007 2527 aa9.56□□□□□ -0.88
ERBB2-206ENST00000578373 ORMDL2Q53FV1 153 aa9.56□□□□□ -0.88
ERBB2-206ENST00000578373 OR9G4Q8NGQ1 327 aa9.56□□□□□ -0.88
ERBB2-206ENST00000578373 SIGLEC8Q9NYZ4 499 aa9.56□□□□□ -0.88
ERBB2-206ENST00000578373 PAX1P15863 534 aa9.56□□□□□ -0.88
ERBB2-206ENST00000578373 GATA1P15976 413 aaPredicted RBP9.56□□□□□ -0.88
ERBB2-206ENST00000578373 ZNF876PQ49A33 203 aa9.56□□□□□ -0.88
ERBB2-206ENST00000578373 TTC32Q5I0X7 151 aa9.56□□□□□ -0.88
ERBB2-206ENST00000578373 SAMD13Q5VXD3 122 aa9.56□□□□□ -0.88
ERBB2-206ENST00000578373 PRR25Q96S07 402 aa9.56□□□□□ -0.88
ERBB2-206ENST00000578373 CSTL1Q9H114 145 aa9.56□□□□□ -0.88
ERBB2-206ENST00000578373 GNLYP22749 145 aa9.55□□□□□ -0.88
ERBB2-206ENST00000578373 EFNA4P52798 201 aa9.55□□□□□ -0.88
ERBB2-206ENST00000578373 TEX36Q5VZQ5 186 aa9.55□□□□□ -0.88
ERBB2-206ENST00000578373 POU2AF1Q16633 256 aa9.55□□□□□ -0.88
ERBB2-206ENST00000578373 FAM231DQ6ZW35 169 aa9.55□□□□□ -0.88
ERBB2-206ENST00000578373 RNF5Q99942 180 aa9.55□□□□□ -0.88
ERBB2-206ENST00000578373 RHPN1-AS1Q9BWJ2 59 aa9.55□□□□□ -0.88
ERBB2-206ENST00000578373 KNCNA6PVL3 124 aa9.55□□□□□ -0.88
ERBB2-206ENST00000578373 ZNF491Q8N8L2 437 aa9.55□□□□□ -0.88
ERBB2-206ENST00000578373 TRAV8-2A0A0B4J237 113 aa9.55□□□□□ -0.88
ERBB2-206ENST00000578373 HTN3P15516 51 aa9.55□□□□□ -0.88
ERBB2-206ENST00000578373 SEM1Q6ZVN7 128 aa9.55□□□□□ -0.88
ERBB2-206ENST00000578373 CD5LO43866 347 aa9.54□□□□□ -0.88
ERBB2-206ENST00000578373 GAGE13Q4V321 117 aa9.54□□□□□ -0.88
ERBB2-206ENST00000578373 LYPD1Q8N2G4 141 aa9.54□□□□□ -0.88
ERBB2-206ENST00000578373 DKK2Q9UBU2 259 aa9.54□□□□□ -0.88
ERBB2-206ENST00000578373 TRIOO75962 3097 aa9.54□□□□□ -0.88
ERBB2-206ENST00000578373 EML5Q05BV3 1969 aa9.54□□□□□ -0.88
ERBB2-206ENST00000578373 TDGF1P13385 188 aa9.54□□□□□ -0.88
ERBB2-206ENST00000578373 CHAC1Q9BUX1 264 aa9.54□□□□□ -0.88
ERBB2-206ENST00000578373 MSRB1Q9NZV6 116 aa9.54□□□□□ -0.88
ERBB2-206ENST00000578373 XIRP2A4UGR9 3374 aa9.54□□□□□ -0.88
ERBB2-206ENST00000578373 K7EMI3 77 aa9.54□□□□□ -0.88
ERBB2-206ENST00000578373 PRSS22Q9GZN4 317 aa9.54□□□□□ -0.88
ERBB2-206ENST00000578373 CST9LQ9H4G1 147 aa9.54□□□□□ -0.88
ERBB2-206ENST00000578373 ZNF492Q9P255 531 aa9.54□□□□□ -0.88
ERBB2-206ENST00000578373 CD28P10747 220 aa9.53□□□□□ -0.88
ERBB2-206ENST00000578373 KIR2DL5BA0A0G2JN68 375 aa9.53□□□□□ -0.88
ERBB2-206ENST00000578373 KIR2DL5BA0A0G2JPC4 375 aa9.53□□□□□ -0.88
ERBB2-206ENST00000578373 KIR2DL5AQ8N109 375 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms