RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 TMEM263Q8WUH6 116 aaKnown RBP2.66□□□□□ -1.98
PTPRM-206ENST00000578093 YIPF6Q96EC8 236 aa2.66□□□□□ -1.98
PTPRM-206ENST00000578093 SLC35E1Q96K37 410 aa2.66□□□□□ -1.98
PTPRM-206ENST00000578093 LINC01587Q99440 93 aa2.66□□□□□ -1.98
PTPRM-206ENST00000578093 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.66□□□□□ -1.98
PTPRM-206ENST00000578093 TIMM8BQ9Y5J9 83 aaPredicted RBP2.66□□□□□ -1.98
PTPRM-206ENST00000578093 CENPXA8MT69 81 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 PRAC2D3DTV9 90 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 F8W036 122 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 WRBO00258 174 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 MRPS12O15235 138 aaKnown RBP2.65□□□□□ -1.99
PTPRM-206ENST00000578093 SIVA1O15304 175 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 DUSP14O95147 198 aaKnown RBP2.65□□□□□ -1.99
PTPRM-206ENST00000578093 APOA1P02647 267 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 S100A9P06702 114 aaKnown RBP2.65□□□□□ -1.99
PTPRM-206ENST00000578093 SNRPCP09234 159 aaKnown RBP2.65□□□□□ -1.99
PTPRM-206ENST00000578093 SULT1A3P0DMM9 295 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 SULT1A4P0DMN0 295 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 ORM2P19652 201 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 CXCL3P19876 107 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 GALR1P47211 349 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 NKX2-5P52952 324 aaPredicted RBP2.65□□□□□ -1.99
PTPRM-206ENST00000578093 RAB4BP61018 213 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 RHOBP62745 196 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 FLI1Q01543 452 aaPredicted RBP2.65□□□□□ -1.99
PTPRM-206ENST00000578093 COTL1Q14019 142 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 GPR107Q5VW38 600 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 LYZL2Q7Z4W2 148 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 TMEM144Q7Z5S9 345 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 TMED4Q7Z7H5 227 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 WFDC10BQ8IUB3 73 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 OR8A1Q8NGG7 326 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 OR1B1Q8NGR6 318 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 TERB2Q8NHR7 220 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 THAP6Q8TBB0 222 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 TRGV9Q99603 122 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 KRTAP4-3Q9BYR4 195 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 CCDC59Q9P031 241 aaKnown RBP2.65□□□□□ -1.99
PTPRM-206ENST00000578093 MTFP1Q9UDX5 166 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 TMEM56-RWDD3S4R434 201 aa2.65□□□□□ -1.99
PTPRM-206ENST00000578093 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 LPAP08519 4548 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 A0A087X0K7 114 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 LRCOL1A6NCL2 159 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 SNRPGP15A8MWD9 76 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 H3BNG1 76 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 H3BP45 60 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 H3BTX0 84 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 GABARAPH6UMI1 98 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 H7BYZ3 331 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 SLC17A3O00476 420 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 CCNKO75909 580 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 GABARAPO95166 117 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 RAB3DO95716 219 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 IGHV3-53P01767 116 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 RLN2P04090 185 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 TBPP20226 339 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 RAB4AP20338 218 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 GPX4P36969 197 aaPredicted RBP2.64□□□□□ -1.99
PTPRM-206ENST00000578093 CDKN1BP46527 198 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 CAMPP49913 170 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 TMBIM6P55061 237 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 KRTAP10-4P60372 401 aaPredicted RBP2.64□□□□□ -1.99
PTPRM-206ENST00000578093 SMCO1Q147U7 214 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 PSG3Q16557 428 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 ZFP69Q49AA0 526 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 SAMD13Q5VXD3 122 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 STEAP1BQ6NZ63 245 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 ACOT7LQ6ZUV0 252 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 TMEM256Q8N2U0 113 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 TMEM229BQ8NBD8 167 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 C11orf72Q8NBR9 251 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 OR4D5Q8NGN0 318 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 OR10J6PQ8NGY7 276 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 ZFAND1Q8TCF1 268 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 RPUSD4Q96CM3 377 aaKnown RBP2.64□□□□□ -1.99
PTPRM-206ENST00000578093 SAT2Q96F10 170 aaPredicted RBP2.64□□□□□ -1.99
PTPRM-206ENST00000578093 C12orf57Q99622 126 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 LINC00467Q9BRT7 94 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 SHANK2-AS3Q9BTD1 123 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 MIXL1Q9H2W2 232 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 GPR132Q9UNW8 380 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 C14orf166Q9Y224 244 aaKnown RBP2.64□□□□□ -1.99
PTPRM-206ENST00000578093 U3KQ87 197 aa2.64□□□□□ -1.99
PTPRM-206ENST00000578093 TRAV12-3A0A0B4J271 114 aa2.63□□□□□ -1.99
PTPRM-206ENST00000578093 A0A0B4J2A0 478 aa2.63□□□□□ -1.99
PTPRM-206ENST00000578093 LINC00862A6NCI5 91 aa2.63□□□□□ -1.99
PTPRM-206ENST00000578093 SNURFLB1AK76 121 aa2.63□□□□□ -1.99
PTPRM-206ENST00000578093 PITX3O75364 302 aa2.63□□□□□ -1.99
PTPRM-206ENST00000578093 IFNA5P01569 189 aa2.63□□□□□ -1.99
PTPRM-206ENST00000578093 LINC00869P0C866 280 aa2.63□□□□□ -1.99
PTPRM-206ENST00000578093 ANXA7P20073 488 aaKnown RBP2.63□□□□□ -1.99
PTPRM-206ENST00000578093 S100PP25815 95 aa2.63□□□□□ -1.99
PTPRM-206ENST00000578093 CCR6P51684 374 aa2.63□□□□□ -1.99
PTPRM-206ENST00000578093 TAS2R19P59542 299 aa2.63□□□□□ -1.99
PTPRM-206ENST00000578093 DEFA1P59665 94 aa2.63□□□□□ -1.99
PTPRM-206ENST00000578093 DEFA3P59666 94 aa2.63□□□□□ -1.99
PTPRM-206ENST00000578093 CD300CQ08708 224 aa2.63□□□□□ -1.99
PTPRM-206ENST00000578093 BTN1A1Q13410 526 aa2.63□□□□□ -1.99
PTPRM-206ENST00000578093 WFDC2Q14508 124 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms