RNA–Protein interactions for RNA: ENST00000576462.1

SLC12A4-217, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2

Gene SLC12A4, Length 673 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-217ENST00000576462 PFDN5Q99471 154 aa13.55□□□□□ -0.24
SLC12A4-217ENST00000576462 AGPAT4-IT1Q9H0P7 198 aa13.55□□□□□ -0.24
SLC12A4-217ENST00000576462 MRPL16Q9NX20 251 aaKnown RBP13.55□□□□□ -0.24
SLC12A4-217ENST00000576462 TP53TG3Q9ULZ0 132 aa13.55□□□□□ -0.24
SLC12A4-217ENST00000576462 VPS13BQ7Z7G8 4022 aa13.55□□□□□ -0.24
SLC12A4-217ENST00000576462 TRBV19A0A075B6N1 114 aa13.54□□□□□ -0.24
SLC12A4-217ENST00000576462 FAM25EA8MYX2 175 aa13.54□□□□□ -0.24
SLC12A4-217ENST00000576462 KLLNB2CW77 178 aa13.54□□□□□ -0.24
SLC12A4-217ENST00000576462 ZNF253O75346 499 aa13.54□□□□□ -0.24
SLC12A4-217ENST00000576462 MPDU1O75352 247 aa13.54□□□□□ -0.24
SLC12A4-217ENST00000576462 TCL1AP56279 114 aa13.54□□□□□ -0.24
SLC12A4-217ENST00000576462 ANXA2RQ3ZCQ2 193 aa13.54□□□□□ -0.24
SLC12A4-217ENST00000576462 Q5VSD8 79 aa13.54□□□□□ -0.24
SLC12A4-217ENST00000576462 MRPL53Q96EL3 112 aaKnown RBP13.54□□□□□ -0.24
SLC12A4-217ENST00000576462 ST6GAL2Q96JF0 529 aa13.54□□□□□ -0.24
SLC12A4-217ENST00000576462 LINC00477Q96M19 166 aa13.54□□□□□ -0.24
SLC12A4-217ENST00000576462 LINC00467Q9BRT7 94 aa13.54□□□□□ -0.24
SLC12A4-217ENST00000576462 UQCC1Q9NVA1 299 aa13.54□□□□□ -0.24
SLC12A4-217ENST00000576462 WDR83OSQ9Y284 106 aa13.54□□□□□ -0.24
SLC12A4-217ENST00000576462 TIMM9Q9Y5J7 89 aa13.54□□□□□ -0.24
SLC12A4-217ENST00000576462 UBE2L5PA0A1B0GUS4 154 aa13.53□□□□□ -0.24
SLC12A4-217ENST00000576462 FAM24AA6NFZ4 105 aa13.53□□□□□ -0.24
SLC12A4-217ENST00000576462 CENPXA8MT69 81 aa13.53□□□□□ -0.24
SLC12A4-217ENST00000576462 RGS13O14921 159 aa13.53□□□□□ -0.24
SLC12A4-217ENST00000576462 GPX1P07203 203 aa13.53□□□□□ -0.24
SLC12A4-217ENST00000576462 BTCP35070 178 aa13.53□□□□□ -0.24
SLC12A4-217ENST00000576462 KRTAP10-1P60331 282 aa13.53□□□□□ -0.24
SLC12A4-217ENST00000576462 ZNF846Q147U1 533 aa13.53□□□□□ -0.24
SLC12A4-217ENST00000576462 CDPF1Q6NVV7 123 aa13.53□□□□□ -0.24
SLC12A4-217ENST00000576462 EXOC3-AS1Q8N2X6 119 aa13.53□□□□□ -0.24
SLC12A4-217ENST00000576462 BLNKQ8WV28 456 aa13.53□□□□□ -0.24
SLC12A4-217ENST00000576462 FRZBQ92765 325 aa13.53□□□□□ -0.24
SLC12A4-217ENST00000576462 FAM19A4Q96LR4 140 aa13.53□□□□□ -0.24
SLC12A4-217ENST00000576462 C8orf49Q96NF6 230 aa13.53□□□□□ -0.24
SLC12A4-217ENST00000576462 SLC39A9Q9NUM3 307 aa13.53□□□□□ -0.24
SLC12A4-217ENST00000576462 A0A087WTM6 91 aa13.52□□□□□ -0.25
SLC12A4-217ENST00000576462 PRAF2O60831 178 aa13.52□□□□□ -0.25
SLC12A4-217ENST00000576462 NDUFB4O95168 129 aa13.52□□□□□ -0.25
SLC12A4-217ENST00000576462 IFNA5P01569 189 aa13.52□□□□□ -0.25
SLC12A4-217ENST00000576462 PYYP10082 97 aa13.52□□□□□ -0.25
SLC12A4-217ENST00000576462 BAXQ07812 192 aa13.52□□□□□ -0.25
SLC12A4-217ENST00000576462 LYPD5Q6UWN5 251 aa13.52□□□□□ -0.25
SLC12A4-217ENST00000576462 Q6ZQT7 251 aa13.52□□□□□ -0.25
SLC12A4-217ENST00000576462 NFE4Q86UQ8 179 aa13.52□□□□□ -0.25
SLC12A4-217ENST00000576462 C12orf45Q8N5I9 185 aaPredicted RBP13.52□□□□□ -0.25
SLC12A4-217ENST00000576462 PRO0255Q9UI72 69 aa13.52□□□□□ -0.25
SLC12A4-217ENST00000576462 HHLA3Q9XRX5 114 aa13.52□□□□□ -0.25
SLC12A4-217ENST00000576462 IGKV2-40A0A087WW87 121 aaPredicted RBP13.51□□□□□ -0.25
SLC12A4-217ENST00000576462 IGKV2D-40P01614 121 aaPredicted RBP13.51□□□□□ -0.25
SLC12A4-217ENST00000576462 CRYBA4P53673 196 aa13.51□□□□□ -0.25
SLC12A4-217ENST00000576462 PRR9Q5T870 116 aa13.51□□□□□ -0.25
SLC12A4-217ENST00000576462 C20orf85Q9H1P6 137 aa13.51□□□□□ -0.25
SLC12A4-217ENST00000576462 PRELID1Q9Y255 219 aa13.51□□□□□ -0.25
SLC12A4-217ENST00000576462 DMBT1Q9UGM3 2413 aaPredicted RBP13.51□□□□□ -0.25
SLC12A4-217ENST00000576462 HIST1H1EP10412 219 aaKnown RBP13.5□□□□□ -0.25
SLC12A4-217ENST00000576462 RPL29P47914 159 aaKnown RBP13.5□□□□□ -0.25
SLC12A4-217ENST00000576462 IBA57Q5T440 356 aaKnown RBP13.5□□□□□ -0.25
SLC12A4-217ENST00000576462 FAM122CQ6P4D5 195 aa13.5□□□□□ -0.25
SLC12A4-217ENST00000576462 ARPC5LQ9BPX5 153 aa13.5□□□□□ -0.25
SLC12A4-217ENST00000576462 TMEM14CQ9P0S9 112 aa13.5□□□□□ -0.25
SLC12A4-217ENST00000576462 MYCBP2O75592 4640 aa13.5□□□□□ -0.25
SLC12A4-217ENST00000576462 IGHV1OR15-1A0A075B7D0 117 aa13.49□□□□□ -0.25
SLC12A4-217ENST00000576462 TRAV9-2A0A087WT02 112 aa13.49□□□□□ -0.25
SLC12A4-217ENST00000576462 C5orf51A6NDU8 294 aa13.49□□□□□ -0.25
SLC12A4-217ENST00000576462 E5RGE8 158 aa13.49□□□□□ -0.25
SLC12A4-217ENST00000576462 SMR3BP02814 79 aaPredicted RBP13.49□□□□□ -0.25
SLC12A4-217ENST00000576462 CRISP2P16562 243 aa13.49□□□□□ -0.25
SLC12A4-217ENST00000576462 FHL2Q14192 279 aa13.49□□□□□ -0.25
SLC12A4-217ENST00000576462 ICAM4Q14773 271 aa13.49□□□□□ -0.25
SLC12A4-217ENST00000576462 MRPL23Q16540 153 aaKnown RBP13.49□□□□□ -0.25
SLC12A4-217ENST00000576462 TMEM78Q5T7P6 136 aa13.49□□□□□ -0.25
SLC12A4-217ENST00000576462 ZFAND2AQ8N6M9 145 aa13.49□□□□□ -0.25
SLC12A4-217ENST00000576462 SDHCQ99643 169 aaPredicted RBP13.49□□□□□ -0.25
SLC12A4-217ENST00000576462 VGLL1Q99990 258 aa13.49□□□□□ -0.25
SLC12A4-217ENST00000576462 LY96Q9Y6Y9 160 aa13.49□□□□□ -0.25
SLC12A4-217ENST00000576462 FGF7P21781 194 aa13.48□□□□□ -0.25
SLC12A4-217ENST00000576462 SLAQ13239 276 aa13.48□□□□□ -0.25
SLC12A4-217ENST00000576462 VWC2Q2TAL6 325 aa13.48□□□□□ -0.25
SLC12A4-217ENST00000576462 C9orf47Q6ZRZ4 202 aa13.48□□□□□ -0.25
SLC12A4-217ENST00000576462 NEGR1Q7Z3B1 354 aa13.48□□□□□ -0.25
SLC12A4-217ENST00000576462 C11orf1Q9H5F2 150 aa13.48□□□□□ -0.25
SLC12A4-217ENST00000576462 AAMDCQ9H7C9 122 aa13.48□□□□□ -0.25
SLC12A4-217ENST00000576462 PVALBP20472 110 aaPredicted RBP13.47□□□□□ -0.25
SLC12A4-217ENST00000576462 S100A10P60903 97 aa13.47□□□□□ -0.25
SLC12A4-217ENST00000576462 HAMPP81172 84 aa13.47□□□□□ -0.25
SLC12A4-217ENST00000576462 PDE6HQ13956 83 aa13.47□□□□□ -0.25
SLC12A4-217ENST00000576462 GCSAMLQ5JQS6 135 aa13.47□□□□□ -0.25
SLC12A4-217ENST00000576462 WFDC10BQ8IUB3 73 aa13.47□□□□□ -0.25
SLC12A4-217ENST00000576462 MDFICQ9P1T7 246 aa13.47□□□□□ -0.25
SLC12A4-217ENST00000576462 TRGV4A0A0C4DH28 118 aa13.46□□□□□ -0.25
SLC12A4-217ENST00000576462 IGSF23A1L1A6 192 aa13.46□□□□□ -0.25
SLC12A4-217ENST00000576462 S100A11P31949 105 aa13.46□□□□□ -0.25
SLC12A4-217ENST00000576462 SULT1A1P50225 295 aa13.46□□□□□ -0.25
SLC12A4-217ENST00000576462 ZNF415Q09FC8 603 aa13.46□□□□□ -0.25
SLC12A4-217ENST00000576462 SEC22CQ9BRL7 303 aa13.46□□□□□ -0.25
SLC12A4-217ENST00000576462 MSRB1Q9NZV6 116 aa13.46□□□□□ -0.25
SLC12A4-217ENST00000576462 NMBP08949 121 aa13.45□□□□□ -0.26
SLC12A4-217ENST00000576462 SFTA3P0C7M3 94 aa13.45□□□□□ -0.26
SLC12A4-217ENST00000576462 IL7P13232 177 aa13.45□□□□□ -0.26
SLC12A4-217ENST00000576462 SRIP30626 198 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms