RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 NMSQ5H8A3 153 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 TMEM268Q5VZI3 342 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 SPATA31B1PQ5VZV4 182 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 GGNBP1Q5YKI7 109 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 PRSS54Q6PEW0 395 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 FOXI2Q6ZQN5 318 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 ACOT7LQ6ZUV0 252 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 ZNF709Q8N972 641 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 INO80EQ8NBZ0 244 aaPredicted RBP4.09□□□□□ -1.75
SMG6-219ENST00000575663 OR52E5Q8NH55 327 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 PPP1R1CQ8WVI7 109 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 TP53RKQ96S44 253 aa4.09□□□□□ -1.75
SMG6-219ENST00000575663 AGRNO00468 2067 aa4.09□□□□□ -1.76
SMG6-219ENST00000575663 TRBV7-9A0A0J9YWB2 115 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 E5RGE8 158 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 PITX3O75364 302 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 TMEM50AO95807 157 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 KRASP01116 189 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 NPSP0C0P6 89 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 GCSHP23434 173 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 G6PCP35575 357 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 SNCAP37840 140 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 ID1P41134 155 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 CRYBA4P53673 196 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 RPS20P60866 119 aaKnown RBP4.08□□□□□ -1.76
SMG6-219ENST00000575663 HAMPP81172 84 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 PRCDQ00LT1 54 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 SAMD13Q5VXD3 122 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 TEX261Q6UWH6 196 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 SIGLEC15Q6ZMC9 328 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 LYZL2Q7Z4W2 148 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 NFE4Q86UQ8 179 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 SLC35G3Q8N808 338 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 OR4C5Q8NGB2 326 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 OR4B1Q8NGF8 309 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 RNASE8Q8TDE3 154 aaKnown RBP4.08□□□□□ -1.76
SMG6-219ENST00000575663 GNPNAT1Q96EK6 184 aaPredicted RBP4.08□□□□□ -1.76
SMG6-219ENST00000575663 CIB3Q96Q77 187 aaPredicted RBP4.08□□□□□ -1.76
SMG6-219ENST00000575663 TMEM70Q9BUB7 260 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 NKX6-2Q9C056 277 aaPredicted RBP4.08□□□□□ -1.76
SMG6-219ENST00000575663 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.08□□□□□ -1.76
SMG6-219ENST00000575663 TNFSF18Q9UNG2 199 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 MRPS16Q9Y3D3 137 aaKnown RBP4.08□□□□□ -1.76
SMG6-219ENST00000575663 HSPB11Q9Y547 144 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 U3KQ87 197 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 RNF213Q63HN8 5207 aa4.08□□□□□ -1.76
SMG6-219ENST00000575663 FAT3Q8TDW7 4589 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 DNAH8Q96JB1 4490 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 TRAV30A0A087WSZ9 112 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 INS-IGF2F8WCM5 200 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 G3V3Q6 166 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 SNAI2O43623 268 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 INSP01308 110 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 HOXB5P09067 269 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 P0C879 139 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 OPRK1P41145 380 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 LPAR6P43657 344 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 AKR1C2P52895 323 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 SNRPEP62304 92 aaKnown RBP4.07□□□□□ -1.76
SMG6-219ENST00000575663 SELENOTP62341 195 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 PSG9Q00887 426 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 BAXQ07812 192 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 SP6Q3SY56 376 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 GCSAMLQ5JQS6 135 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 GDF5OSQ5U4N7 250 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 EIF5AL1Q6IS14 154 aaKnown RBP4.07□□□□□ -1.76
SMG6-219ENST00000575663 EBLN2Q6P2I7 272 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 Q6ZRN7 208 aaPredicted RBP4.07□□□□□ -1.76
SMG6-219ENST00000575663 H2BFWTQ7Z2G1 175 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 C1orf158Q8N1D5 194 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 KCNRGQ8N5I3 272 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 OR4D5Q8NGN0 318 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 OR4A16Q8NH70 328 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 PHYHIPLQ96FC7 376 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 SEC22AQ96IW7 307 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 LINC00052Q96N35 136 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 AQP10Q96PS8 301 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 SLC25A31Q9H0C2 315 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 SLC35B3Q9H1N7 401 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 HSPB7Q9UBY9 170 aa4.07□□□□□ -1.76
SMG6-219ENST00000575663 A0A087WTM6 91 aa4.06□□□□□ -1.76
SMG6-219ENST00000575663 SIX6O95475 246 aa4.06□□□□□ -1.76
SMG6-219ENST00000575663 MBPP02686 304 aaPredicted RBP4.06□□□□□ -1.76
SMG6-219ENST00000575663 DNAH10OSP0CZ25 163 aa4.06□□□□□ -1.76
SMG6-219ENST00000575663 TSPOP30536 169 aa4.06□□□□□ -1.76
SMG6-219ENST00000575663 PSMB3P49720 205 aa4.06□□□□□ -1.76
SMG6-219ENST00000575663 SUB1P53999 127 aaKnown RBP eCLIP4.06□□□□□ -1.76
SMG6-219ENST00000575663 PAX9P55771 341 aa4.06□□□□□ -1.76
SMG6-219ENST00000575663 LGALSLQ3ZCW2 172 aaPredicted RBP4.06□□□□□ -1.76
SMG6-219ENST00000575663 RNASEKQ6P5S7 137 aaKnown RBP4.06□□□□□ -1.76
SMG6-219ENST00000575663 OR10J6PQ8NGY7 276 aa4.06□□□□□ -1.76
SMG6-219ENST00000575663 OR4X1Q8NH49 305 aa4.06□□□□□ -1.76
SMG6-219ENST00000575663 RXFP4Q8TDU9 374 aa4.06□□□□□ -1.76
SMG6-219ENST00000575663 Q8WTZ3 238 aa4.06□□□□□ -1.76
SMG6-219ENST00000575663 SMIM8Q96KF7 97 aa4.06□□□□□ -1.76
SMG6-219ENST00000575663 IGF2BP2-AS1Q96M15 143 aa4.06□□□□□ -1.76
SMG6-219ENST00000575663 UHRF2Q96PU4 802 aa4.06□□□□□ -1.76
SMG6-219ENST00000575663 BOLA1Q9Y3E2 137 aa4.06□□□□□ -1.76
SMG6-219ENST00000575663 SRRM2Q9UQ35 2752 aaKnown RBP4.05□□□□□ -1.76
SMG6-219ENST00000575663 TRAV26-1A0A087WT03 109 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms