RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 ERCC8Q13216 396 aa10.8□□□□□ -0.68
TRAPPC1-207ENST00000575639 C9orf47Q6ZRZ4 202 aa10.8□□□□□ -0.68
TRAPPC1-207ENST00000575639 C20orf144Q9BQM9 153 aa10.8□□□□□ -0.68
TRAPPC1-207ENST00000575639 AGPAT4-IT1Q9H0P7 198 aa10.8□□□□□ -0.68
TRAPPC1-207ENST00000575639 DNAH7Q8WXX0 4024 aa10.8□□□□□ -0.68
TRAPPC1-207ENST00000575639 RBAKDNA6NC62 111 aa10.79□□□□□ -0.68
TRAPPC1-207ENST00000575639 NUPR2A6NF83 97 aa10.79□□□□□ -0.68
TRAPPC1-207ENST00000575639 H7BYZ3 331 aa10.79□□□□□ -0.68
TRAPPC1-207ENST00000575639 C1QBP02746 253 aa10.79□□□□□ -0.68
TRAPPC1-207ENST00000575639 SEC11BP0C7V7 166 aa10.79□□□□□ -0.68
TRAPPC1-207ENST00000575639 EMP1P54849 157 aa10.79□□□□□ -0.68
TRAPPC1-207ENST00000575639 NANOS2P60321 138 aaKnown RBP10.79□□□□□ -0.68
TRAPPC1-207ENST00000575639 IQCF2Q8IXL9 164 aa10.79□□□□□ -0.68
TRAPPC1-207ENST00000575639 ARL6IP6Q8N6S5 226 aa10.79□□□□□ -0.68
TRAPPC1-207ENST00000575639 TEX48A0A1B0GUV7 120 aa10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 LOC102723971A0A1B0GUV8 181 aa10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 UMAD1C9J7I0 102 aa10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 J3KRW8 73 aa10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 SLC25A5P05141 298 aaKnown RBP10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 NMBP08949 121 aa10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 SPART-AS1P0CW21 52 aa10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 TPT1P13693 172 aaKnown RBP10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 ZNF138P52744 262 aa10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 TAS2R60P59551 318 aa10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 STOML3Q8TAV4 291 aa10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 SUN5Q8TC36 379 aa10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 PHLDA1Q8WV24 401 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 VGLL1Q99990 258 aa10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 NIPSNAP3BQ9BS92 247 aa10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 KLK5Q9Y337 293 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC1-207ENST00000575639 ZNF705GA8MUZ8 300 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC1-207ENST00000575639 DIRC3C9JPN6 131 aa10.77□□□□□ -0.69
TRAPPC1-207ENST00000575639 GPX1P07203 203 aa10.77□□□□□ -0.69
TRAPPC1-207ENST00000575639 HTN1P15515 57 aa10.77□□□□□ -0.69
TRAPPC1-207ENST00000575639 GFI1BQ5VTD9 330 aa10.77□□□□□ -0.69
TRAPPC1-207ENST00000575639 CEMP1Q6PRD7 247 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC1-207ENST00000575639 TRBV7-9A0A0J9YWB2 115 aa10.76□□□□□ -0.69
TRAPPC1-207ENST00000575639 C11orf94C9JXX5 98 aa10.76□□□□□ -0.69
TRAPPC1-207ENST00000575639 RNASE4P34096 147 aaKnown RBP10.76□□□□□ -0.69
TRAPPC1-207ENST00000575639 ZNF726P1Q15940 193 aa10.76□□□□□ -0.69
TRAPPC1-207ENST00000575639 EIF5AL1Q6IS14 154 aaKnown RBP10.76□□□□□ -0.69
TRAPPC1-207ENST00000575639 CCDC28AQ8IWP9 274 aa10.76□□□□□ -0.69
TRAPPC1-207ENST00000575639 ZNF492Q9P255 531 aa10.76□□□□□ -0.69
TRAPPC1-207ENST00000575639 RPH3ALQ9UNE2 315 aa10.76□□□□□ -0.69
TRAPPC1-207ENST00000575639 TRAV12-3A0A0B4J271 114 aa10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 SERTM2A0A1B0GWG4 89 aa10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 C7orf71A4D174 169 aa10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 MAP1LC3B2A6NCE7 125 aa10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 K7EQM0 130 aa10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 CRISP2P16562 243 aa10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 KIR3DS1Q14943 382 aa10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 LGALSLQ3ZCW2 172 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 ZNF493Q6ZR52 646 aa10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 GOLT1AQ6ZVE7 132 aa10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 SSX7Q7RTT5 188 aa10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 C5orf17Q8NAS9 161 aa10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 TMED6Q8WW62 240 aa10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 FAM19A4Q96LR4 140 aa10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 MAP1LC3BQ9GZQ8 125 aa10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 YTHDF2Q9Y5A9 579 aaKnown RBP10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 LENEPQ9Y5L5 61 aa10.75□□□□□ -0.69
TRAPPC1-207ENST00000575639 A0A1W2PRE2 83 aa10.74□□□□□ -0.69
TRAPPC1-207ENST00000575639 KLLNB2CW77 178 aa10.74□□□□□ -0.69
TRAPPC1-207ENST00000575639 FGF8P55075 233 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC1-207ENST00000575639 SUMO1P63165 101 aaKnown RBP10.74□□□□□ -0.69
TRAPPC1-207ENST00000575639 DPPA3Q6W0C5 159 aa10.74□□□□□ -0.69
TRAPPC1-207ENST00000575639 FAM213BQ8TBF2 198 aa10.74□□□□□ -0.69
TRAPPC1-207ENST00000575639 C16orf74Q96GX8 76 aa10.74□□□□□ -0.69
TRAPPC1-207ENST00000575639 PYGO2Q9BRQ0 406 aa10.74□□□□□ -0.69
TRAPPC1-207ENST00000575639 NKX6-2Q9C056 277 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC1-207ENST00000575639 CELA1Q9UNI1 258 aa10.74□□□□□ -0.69
TRAPPC1-207ENST00000575639 C12orf74Q32Q52 190 aa10.73□□□□□ -0.69
TRAPPC1-207ENST00000575639 ZFP69Q49AA0 526 aa10.73□□□□□ -0.69
TRAPPC1-207ENST00000575639 FAM222AQ5U5X8 452 aa10.73□□□□□ -0.69
TRAPPC1-207ENST00000575639 Q8TAT8 98 aa10.73□□□□□ -0.69
TRAPPC1-207ENST00000575639 TMPRSS5Q9H3S3 457 aa10.73□□□□□ -0.69
TRAPPC1-207ENST00000575639 DKK2Q9UBU2 259 aa10.73□□□□□ -0.69
TRAPPC1-207ENST00000575639 TRAV10A0A0B4J240 114 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 LYRM9A8MSI8 78 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 IFNA7P01567 189 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 PRM2P04554 102 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 AZU1P20160 251 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 FHITP49789 147 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 RAB5CP51148 216 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 GNG5P63218 68 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 CD300CQ08708 224 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 BTN1A1Q13410 526 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 Q6ZTC4 211 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 SLC51BQ86UW2 128 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 ZFAND2AQ8N6M9 145 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 C2CD4CQ8TF44 421 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 TMEM263Q8WUH6 116 aaKnown RBP10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 SFT2D1Q8WV19 159 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 EPDR1Q9UM22 224 aa10.72□□□□□ -0.69
TRAPPC1-207ENST00000575639 GGTLC3B5MD39 225 aa10.71□□□□□ -0.69
TRAPPC1-207ENST00000575639 ZNF324O75467 553 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC1-207ENST00000575639 TCRAP04437 139 aa10.71□□□□□ -0.69
TRAPPC1-207ENST00000575639 H2AFB1P0C5Y9 115 aa10.71□□□□□ -0.69
TRAPPC1-207ENST00000575639 UBE2G2P60604 165 aa10.71□□□□□ -0.69
TRAPPC1-207ENST00000575639 MBD3L1Q8WWY6 194 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms