RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 PSG9Q00887 426 aa9.64□□□□□ -0.87
RPAIN-216ENST00000575599 PEA15Q15121 130 aa9.64□□□□□ -0.87
RPAIN-216ENST00000575599 TOR2AQ5JU69 321 aa9.64□□□□□ -0.87
RPAIN-216ENST00000575599 ZNF738Q8NE65 137 aa9.64□□□□□ -0.87
RPAIN-216ENST00000575599 FAM210AQ96ND0 272 aa9.64□□□□□ -0.87
RPAIN-216ENST00000575599 C1QTNF4Q9BXJ3 329 aa9.64□□□□□ -0.87
RPAIN-216ENST00000575599 AAMDCQ9H7C9 122 aa9.64□□□□□ -0.87
RPAIN-216ENST00000575599 TRBV19A0A075B6N1 114 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 A0A0J9YX75 114 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 RAB19A4D1S5 217 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 LINC00862A6NCI5 91 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 CXorf65A6NEN9 183 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 H3BQ15 152 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 IGLC2P0DOY2 106 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 PRB4P10163 310 aaPredicted RBP9.63□□□□□ -0.87
RPAIN-216ENST00000575599 BCL2P10415 239 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 HLA-DMBP28068 263 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 RANP62826 216 aaKnown RBP9.63□□□□□ -0.87
RPAIN-216ENST00000575599 PDE6HQ13956 83 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 CSNK1G2-AS1Q8NCQ2 148 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 TXNDC17Q9BRA2 123 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 NKX6-2Q9C056 277 aaPredicted RBP9.63□□□□□ -0.87
RPAIN-216ENST00000575599 TREM1Q9NP99 234 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 MED9Q9NWA0 146 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 ZNF586Q9NXT0 402 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 VAX2Q9UIW0 290 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 ARL2-SNX15V9GYD0 113 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 A0A1W2PRE2 83 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 C11orf94C9JXX5 98 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 ZNF705DP0CH99 300 aaPredicted RBP9.63□□□□□ -0.87
RPAIN-216ENST00000575599 ZNF705BP0CI00 300 aaPredicted RBP9.63□□□□□ -0.87
RPAIN-216ENST00000575599 LYPD1Q8N2G4 141 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 CMTM2Q8TAZ6 248 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 SUN5Q8TC36 379 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 RXFP4Q8TDU9 374 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 SLC50A1Q9BRV3 221 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 SLC35B3Q9H1N7 401 aa9.63□□□□□ -0.87
RPAIN-216ENST00000575599 C11orf68Q9H3H3 251 aaKnown RBP9.63□□□□□ -0.87
RPAIN-216ENST00000575599 CSMD3Q7Z407 3707 aa9.62□□□□□ -0.87
RPAIN-216ENST00000575599 IGHV4-28A0A0C4DH34 117 aa9.62□□□□□ -0.87
RPAIN-216ENST00000575599 LOC102723971A0A1B0GUV8 181 aa9.62□□□□□ -0.87
RPAIN-216ENST00000575599 PGPA6NDG6 321 aa9.62□□□□□ -0.87
RPAIN-216ENST00000575599 FAM74A7A6NL05 159 aa9.62□□□□□ -0.87
RPAIN-216ENST00000575599 SLC17A3O00476 420 aa9.62□□□□□ -0.87
RPAIN-216ENST00000575599 CSN1S1P47710 185 aa9.62□□□□□ -0.87
RPAIN-216ENST00000575599 CNN1P51911 297 aaKnown RBP9.62□□□□□ -0.87
RPAIN-216ENST00000575599 SUMO1P63165 101 aaKnown RBP9.62□□□□□ -0.87
RPAIN-216ENST00000575599 Q8NAQ8 132 aa9.62□□□□□ -0.87
RPAIN-216ENST00000575599 Q9H3A6 140 aa9.62□□□□□ -0.87
RPAIN-216ENST00000575599 YTHDF2Q9Y5A9 579 aaKnown RBP9.62□□□□□ -0.87
RPAIN-216ENST00000575599 X6R8D5 127 aa9.62□□□□□ -0.87
RPAIN-216ENST00000575599 IGHV3OR16-12A0A075B7B8 117 aa9.61□□□□□ -0.87
RPAIN-216ENST00000575599 F6UZH7 168 aa9.61□□□□□ -0.87
RPAIN-216ENST00000575599 ZNF253O75346 499 aa9.61□□□□□ -0.87
RPAIN-216ENST00000575599 DUSP14O95147 198 aaKnown RBP9.61□□□□□ -0.87
RPAIN-216ENST00000575599 SLC25A5P05141 298 aaKnown RBP9.61□□□□□ -0.87
RPAIN-216ENST00000575599 MIFP14174 115 aa9.61□□□□□ -0.87
RPAIN-216ENST00000575599 MEF2BQ02080 365 aaPredicted RBP9.61□□□□□ -0.87
RPAIN-216ENST00000575599 HIST1H1AQ02539 215 aaPredicted RBP9.61□□□□□ -0.87
RPAIN-216ENST00000575599 PSG3Q16557 428 aa9.61□□□□□ -0.87
RPAIN-216ENST00000575599 ZNF506Q5JVG8 444 aa9.61□□□□□ -0.87
RPAIN-216ENST00000575599 CLUHP3Q96NS8 147 aa9.61□□□□□ -0.87
RPAIN-216ENST00000575599 ZNF331Q9NQX6 463 aaPredicted RBP9.61□□□□□ -0.87
RPAIN-216ENST00000575599 OTORQ9NRC9 128 aa9.61□□□□□ -0.87
RPAIN-216ENST00000575599 PDE6DO43924 150 aa9.6□□□□□ -0.87
RPAIN-216ENST00000575599 ATP5G3P48201 142 aa9.6□□□□□ -0.87
RPAIN-216ENST00000575599 CEBPGP53567 150 aa9.6□□□□□ -0.87
RPAIN-216ENST00000575599 NANOS2P60321 138 aaKnown RBP9.6□□□□□ -0.87
RPAIN-216ENST00000575599 ICAM4Q14773 271 aa9.6□□□□□ -0.87
RPAIN-216ENST00000575599 UQCC3Q6UW78 93 aa9.6□□□□□ -0.87
RPAIN-216ENST00000575599 EXOC3-AS1Q8N2X6 119 aa9.6□□□□□ -0.87
RPAIN-216ENST00000575599 C11orf45Q8TAV5 145 aa9.6□□□□□ -0.87
RPAIN-216ENST00000575599 RPUSD4Q96CM3 377 aaKnown RBP9.6□□□□□ -0.87
RPAIN-216ENST00000575599 SMDT1Q9H4I9 107 aa9.6□□□□□ -0.87
RPAIN-216ENST00000575599 RPH3ALQ9UNE2 315 aa9.6□□□□□ -0.87
RPAIN-216ENST00000575599 PRELID1Q9Y255 219 aa9.6□□□□□ -0.87
RPAIN-216ENST00000575599 NDUFB4O95168 129 aa9.59□□□□□ -0.87
RPAIN-216ENST00000575599 RBMY1A1P0DJD3 496 aaKnown RBP9.59□□□□□ -0.87
RPAIN-216ENST00000575599 RBMY1CP0DJD4 496 aa9.59□□□□□ -0.87
RPAIN-216ENST00000575599 RBMY1FQ15415 496 aaKnown RBP9.59□□□□□ -0.87
RPAIN-216ENST00000575599 SPINK13Q1W4C9 94 aa9.59□□□□□ -0.87
RPAIN-216ENST00000575599 AMTNQ6UX39 209 aa9.59□□□□□ -0.87
RPAIN-216ENST00000575599 OR8A1Q8NGG7 326 aa9.59□□□□□ -0.87
RPAIN-216ENST00000575599 TCEAL7Q9BRU2 100 aa9.59□□□□□ -0.87
RPAIN-216ENST00000575599 RYR3Q15413 4870 aa9.58□□□□□ -0.88
RPAIN-216ENST00000575599 NUPR2A6NF83 97 aa9.58□□□□□ -0.88
RPAIN-216ENST00000575599 ZNF705FA8MVS1 300 aaPredicted RBP9.58□□□□□ -0.88
RPAIN-216ENST00000575599 GGTLC3B5MD39 225 aa9.58□□□□□ -0.88
RPAIN-216ENST00000575599 K7EQM0 130 aa9.58□□□□□ -0.88
RPAIN-216ENST00000575599 M0R2Z0 102 aa9.58□□□□□ -0.88
RPAIN-216ENST00000575599 SLC7A5P1Q8MH63 180 aa9.58□□□□□ -0.88
RPAIN-216ENST00000575599 C5orf17Q8NAS9 161 aa9.58□□□□□ -0.88
RPAIN-216ENST00000575599 PPP1R14DQ9NXH3 145 aa9.58□□□□□ -0.88
RPAIN-216ENST00000575599 GOLT1BQ9Y3E0 138 aa9.58□□□□□ -0.88
RPAIN-216ENST00000575599 A8MTW9 85 aa9.57□□□□□ -0.88
RPAIN-216ENST00000575599 ZNF705AQ6ZN79 300 aaPredicted RBP9.57□□□□□ -0.88
RPAIN-216ENST00000575599 EIF4E3Q8N5X7 224 aaKnown RBP9.57□□□□□ -0.88
RPAIN-216ENST00000575599 HIST1H2BAQ96A08 127 aa9.57□□□□□ -0.88
RPAIN-216ENST00000575599 EPDR1Q9UM22 224 aa9.57□□□□□ -0.88
RPAIN-216ENST00000575599 PRAC2D3DTV9 90 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms