RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 RBMY1A1P0DJD3 496 aaKnown RBP10.99□□□□□ -0.65
LITAF-217ENST00000575426 RBMY1CP0DJD4 496 aa10.99□□□□□ -0.65
LITAF-217ENST00000575426 RBMY1FQ15415 496 aaKnown RBP10.99□□□□□ -0.65
LITAF-217ENST00000575426 EIF5AL1Q6IS14 154 aaKnown RBP10.99□□□□□ -0.65
LITAF-217ENST00000575426 STOML3Q8TAV4 291 aa10.99□□□□□ -0.65
LITAF-217ENST00000575426 LINC01587Q99440 93 aa10.99□□□□□ -0.65
LITAF-217ENST00000575426 C20orf144Q9BQM9 153 aa10.99□□□□□ -0.65
LITAF-217ENST00000575426 A0A1B0GVG6 124 aa10.98□□□□□ -0.65
LITAF-217ENST00000575426 DIRC3C9JPN6 131 aa10.98□□□□□ -0.65
LITAF-217ENST00000575426 SLC25A5P05141 298 aaKnown RBP10.98□□□□□ -0.65
LITAF-217ENST00000575426 PMS2P11Q13670 270 aa10.98□□□□□ -0.65
LITAF-217ENST00000575426 ZNF726P1Q15940 193 aa10.98□□□□□ -0.65
LITAF-217ENST00000575426 ZFP69Q49AA0 526 aa10.98□□□□□ -0.65
LITAF-217ENST00000575426 CASC10Q5T4H9 136 aa10.98□□□□□ -0.65
LITAF-217ENST00000575426 SSX7Q7RTT5 188 aa10.98□□□□□ -0.65
LITAF-217ENST00000575426 ARL6IP6Q8N6S5 226 aa10.98□□□□□ -0.65
LITAF-217ENST00000575426 SUN5Q8TC36 379 aa10.98□□□□□ -0.65
LITAF-217ENST00000575426 VGLL1Q99990 258 aa10.98□□□□□ -0.65
LITAF-217ENST00000575426 LOC102723971A0A1B0GUV8 181 aa10.97□□□□□ -0.65
LITAF-217ENST00000575426 MAP1LC3B2A6NCE7 125 aa10.97□□□□□ -0.65
LITAF-217ENST00000575426 ZNF138P52744 262 aa10.97□□□□□ -0.65
LITAF-217ENST00000575426 FGF8P55075 233 aaPredicted RBP10.97□□□□□ -0.65
LITAF-217ENST00000575426 FAM213BQ8TBF2 198 aa10.97□□□□□ -0.65
LITAF-217ENST00000575426 TMED6Q8WW62 240 aa10.97□□□□□ -0.65
LITAF-217ENST00000575426 NIPSNAP3BQ9BS92 247 aa10.97□□□□□ -0.65
LITAF-217ENST00000575426 MAP1LC3BQ9GZQ8 125 aa10.97□□□□□ -0.65
LITAF-217ENST00000575426 ZNF492Q9P255 531 aa10.97□□□□□ -0.65
LITAF-217ENST00000575426 ZNF705GA8MUZ8 300 aaPredicted RBP10.96□□□□□ -0.65
LITAF-217ENST00000575426 H7BYZ3 331 aa10.96□□□□□ -0.65
LITAF-217ENST00000575426 K7EQM0 130 aa10.96□□□□□ -0.65
LITAF-217ENST00000575426 GPX1P07203 203 aa10.96□□□□□ -0.65
LITAF-217ENST00000575426 HTN1P15515 57 aa10.96□□□□□ -0.65
LITAF-217ENST00000575426 EMP1P54849 157 aa10.96□□□□□ -0.65
LITAF-217ENST00000575426 SUMO1P63165 101 aaKnown RBP10.96□□□□□ -0.65
LITAF-217ENST00000575426 GFI1BQ5VTD9 330 aa10.96□□□□□ -0.65
LITAF-217ENST00000575426 DPPA3Q6W0C5 159 aa10.96□□□□□ -0.65
LITAF-217ENST00000575426 SLC51BQ86UW2 128 aa10.96□□□□□ -0.65
LITAF-217ENST00000575426 TRAV12-3A0A0B4J271 114 aa10.95□□□□□ -0.66
LITAF-217ENST00000575426 SERTM2A0A1B0GWG4 89 aa10.95□□□□□ -0.66
LITAF-217ENST00000575426 A0A1W2PRE2 83 aa10.95□□□□□ -0.66
LITAF-217ENST00000575426 C7orf71A4D174 169 aa10.95□□□□□ -0.66
LITAF-217ENST00000575426 NMBP08949 121 aa10.95□□□□□ -0.66
LITAF-217ENST00000575426 SPART-AS1P0CW21 52 aa10.95□□□□□ -0.66
LITAF-217ENST00000575426 RNASE4P34096 147 aaKnown RBP10.95□□□□□ -0.66
LITAF-217ENST00000575426 TAS2R60P59551 318 aa10.95□□□□□ -0.66
LITAF-217ENST00000575426 NANOS2P60321 138 aaKnown RBP10.95□□□□□ -0.66
LITAF-217ENST00000575426 KIR3DS1Q14943 382 aa10.95□□□□□ -0.66
LITAF-217ENST00000575426 GOLT1AQ6ZVE7 132 aa10.95□□□□□ -0.66
LITAF-217ENST00000575426 CCDC28AQ8IWP9 274 aa10.95□□□□□ -0.66
LITAF-217ENST00000575426 C5orf17Q8NAS9 161 aa10.95□□□□□ -0.66
LITAF-217ENST00000575426 TMPRSS5Q9H3S3 457 aa10.95□□□□□ -0.66
LITAF-217ENST00000575426 TRBV7-9A0A0J9YWB2 115 aa10.94□□□□□ -0.66
LITAF-217ENST00000575426 TEX48A0A1B0GUV7 120 aa10.94□□□□□ -0.66
LITAF-217ENST00000575426 CRISP2P16562 243 aa10.94□□□□□ -0.66
LITAF-217ENST00000575426 FHITP49789 147 aa10.94□□□□□ -0.66
LITAF-217ENST00000575426 UBE2G2P60604 165 aa10.94□□□□□ -0.66
LITAF-217ENST00000575426 GNG5P63218 68 aa10.94□□□□□ -0.66
LITAF-217ENST00000575426 CD300CQ08708 224 aa10.94□□□□□ -0.66
LITAF-217ENST00000575426 SFT2D1Q8WV19 159 aa10.94□□□□□ -0.66
LITAF-217ENST00000575426 FAM19A4Q96LR4 140 aa10.94□□□□□ -0.66
LITAF-217ENST00000575426 NKX6-2Q9C056 277 aaPredicted RBP10.94□□□□□ -0.66
LITAF-217ENST00000575426 LENEPQ9Y5L5 61 aa10.94□□□□□ -0.66
LITAF-217ENST00000575426 NUPR2A6NF83 97 aa10.93□□□□□ -0.66
LITAF-217ENST00000575426 IFNA7P01567 189 aa10.93□□□□□ -0.66
LITAF-217ENST00000575426 H2AFB1P0C5Y9 115 aa10.93□□□□□ -0.66
LITAF-217ENST00000575426 RAB5CP51148 216 aa10.93□□□□□ -0.66
LITAF-217ENST00000575426 Q8TAT8 98 aa10.93□□□□□ -0.66
LITAF-217ENST00000575426 PHLDA1Q8WV24 401 aaPredicted RBP10.93□□□□□ -0.66
LITAF-217ENST00000575426 MBD3L1Q8WWY6 194 aa10.93□□□□□ -0.66
LITAF-217ENST00000575426 PLA2G2EQ9NZK7 142 aa10.93□□□□□ -0.66
LITAF-217ENST00000575426 KLK5Q9Y337 293 aaPredicted RBP10.93□□□□□ -0.66
LITAF-217ENST00000575426 KLLNB2CW77 178 aa10.92□□□□□ -0.66
LITAF-217ENST00000575426 TCRAP04437 139 aa10.92□□□□□ -0.66
LITAF-217ENST00000575426 PRM2P04554 102 aa10.92□□□□□ -0.66
LITAF-217ENST00000575426 BTN1A1Q13410 526 aa10.92□□□□□ -0.66
LITAF-217ENST00000575426 ZNF493Q6ZR52 646 aa10.92□□□□□ -0.66
LITAF-217ENST00000575426 C9orf62Q8N4C0 152 aa10.92□□□□□ -0.66
LITAF-217ENST00000575426 C16orf74Q96GX8 76 aa10.92□□□□□ -0.66
LITAF-217ENST00000575426 PYGO2Q9BRQ0 406 aa10.92□□□□□ -0.66
LITAF-217ENST00000575426 NDFIP1Q9BT67 221 aa10.92□□□□□ -0.66
LITAF-217ENST00000575426 EPDR1Q9UM22 224 aa10.92□□□□□ -0.66
LITAF-217ENST00000575426 YTHDF2Q9Y5A9 579 aaKnown RBP10.92□□□□□ -0.66
LITAF-217ENST00000575426 GGTLC3B5MD39 225 aa10.91□□□□□ -0.66
LITAF-217ENST00000575426 C11orf94C9JXX5 98 aa10.91□□□□□ -0.66
LITAF-217ENST00000575426 TEX46H3BTG2 121 aa10.91□□□□□ -0.66
LITAF-217ENST00000575426 FAM222AQ5U5X8 452 aa10.91□□□□□ -0.66
LITAF-217ENST00000575426 CEMP1Q6PRD7 247 aaPredicted RBP10.91□□□□□ -0.66
LITAF-217ENST00000575426 ZFAND2AQ8N6M9 145 aa10.91□□□□□ -0.66
LITAF-217ENST00000575426 CELA1Q9UNI1 258 aa10.91□□□□□ -0.66
LITAF-217ENST00000575426 A0A1B0GV50 99 aa10.9□□□□□ -0.66
LITAF-217ENST00000575426 FBLL1A6NHQ2 334 aaKnown RBP10.9□□□□□ -0.66
LITAF-217ENST00000575426 FAM74A7A6NL05 159 aa10.9□□□□□ -0.66
LITAF-217ENST00000575426 F6UZH7 168 aa10.9□□□□□ -0.66
LITAF-217ENST00000575426 RGS13O14921 159 aa10.9□□□□□ -0.66
LITAF-217ENST00000575426 AZU1P20160 251 aa10.9□□□□□ -0.66
LITAF-217ENST00000575426 PPT1P50897 306 aa10.9□□□□□ -0.66
LITAF-217ENST00000575426 CST9LP1Q5W188 147 aa10.9□□□□□ -0.66
LITAF-217ENST00000575426 CYB561D1Q8N8Q1 229 aa10.9□□□□□ -0.66
LITAF-217ENST00000575426 TMEM263Q8WUH6 116 aaKnown RBP10.9□□□□□ -0.66
LITAF-217ENST00000575426 ATG101Q9BSB4 218 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms