RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 PSMG4Q5JS54 123 aa10.34□□□□□ -0.75
ERCC4-207ENST00000575156 RBPMS2Q6ZRY4 209 aaKnown RBP10.34□□□□□ -0.75
ERCC4-207ENST00000575156 SFRP2Q96HF1 295 aa10.34□□□□□ -0.75
ERCC4-207ENST00000575156 TRBV6-1A0A0K0K1D8 114 aa10.33□□□□□ -0.76
ERCC4-207ENST00000575156 SERTM2A0A1B0GWG4 89 aa10.33□□□□□ -0.76
ERCC4-207ENST00000575156 SAP30O75446 220 aa10.33□□□□□ -0.76
ERCC4-207ENST00000575156 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.33□□□□□ -0.76
ERCC4-207ENST00000575156 SIGLEC8Q9NYZ4 499 aa10.33□□□□□ -0.76
ERCC4-207ENST00000575156 STAB1Q9NY15 2570 aa10.32□□□□□ -0.76
ERCC4-207ENST00000575156 A0A087WWC5 75 aa10.32□□□□□ -0.76
ERCC4-207ENST00000575156 ID1P41134 155 aa10.32□□□□□ -0.76
ERCC4-207ENST00000575156 GDF5OSQ5U4N7 250 aa10.32□□□□□ -0.76
ERCC4-207ENST00000575156 TMEM183AQ8IXX5 376 aa10.32□□□□□ -0.76
ERCC4-207ENST00000575156 ZC2HC1AQ96GY0 325 aa10.32□□□□□ -0.76
ERCC4-207ENST00000575156 CLEC5AQ9NY25 188 aa10.32□□□□□ -0.76
ERCC4-207ENST00000575156 MT-ND4LP03901 98 aa10.32□□□□□ -0.76
ERCC4-207ENST00000575156 ERVFC1-1P60608 527 aa10.32□□□□□ -0.76
ERCC4-207ENST00000575156 PAFAH1B2P68402 229 aa10.32□□□□□ -0.76
ERCC4-207ENST00000575156 PRR25Q96S07 402 aa10.32□□□□□ -0.76
ERCC4-207ENST00000575156 RBAKDNA6NC62 111 aa10.31□□□□□ -0.76
ERCC4-207ENST00000575156 CD33P20138 364 aa10.31□□□□□ -0.76
ERCC4-207ENST00000575156 CRIP1P50238 77 aa10.31□□□□□ -0.76
ERCC4-207ENST00000575156 ZFP30Q9Y2G7 519 aa10.31□□□□□ -0.76
ERCC4-207ENST00000575156 URGCP-MRPS24S4R325 110 aa10.31□□□□□ -0.76
ERCC4-207ENST00000575156 H7BYZ3 331 aa10.3□□□□□ -0.76
ERCC4-207ENST00000575156 SNRPD3P62318 126 aaKnown RBP10.3□□□□□ -0.76
ERCC4-207ENST00000575156 HIST1H1AQ02539 215 aaPredicted RBP10.3□□□□□ -0.76
ERCC4-207ENST00000575156 C9orf47Q6ZRZ4 202 aa10.3□□□□□ -0.76
ERCC4-207ENST00000575156 OR8A1Q8NGG7 326 aa10.3□□□□□ -0.76
ERCC4-207ENST00000575156 OR10G8Q8NGN5 311 aa10.3□□□□□ -0.76
ERCC4-207ENST00000575156 SMCO4Q9NRQ5 59 aa10.3□□□□□ -0.76
ERCC4-207ENST00000575156 COL6A5A8TX70 2615 aa10.3□□□□□ -0.76
ERCC4-207ENST00000575156 CT45A10P0DMU9 189 aa10.3□□□□□ -0.76
ERCC4-207ENST00000575156 ZNF124Q15973 351 aa10.3□□□□□ -0.76
ERCC4-207ENST00000575156 TMEM78Q5T7P6 136 aa10.3□□□□□ -0.76
ERCC4-207ENST00000575156 SAMD13Q5VXD3 122 aa10.3□□□□□ -0.76
ERCC4-207ENST00000575156 ZNF256Q9Y2P7 627 aaPredicted RBP10.3□□□□□ -0.76
ERCC4-207ENST00000575156 NOTCH3Q9UM47 2321 aa10.29□□□□□ -0.76
ERCC4-207ENST00000575156 NPIPB6E9PJ23 425 aa10.29□□□□□ -0.76
ERCC4-207ENST00000575156 CA1P00915 261 aaPredicted RBP10.29□□□□□ -0.76
ERCC4-207ENST00000575156 ZNF80P51504 273 aaPredicted RBP10.29□□□□□ -0.76
ERCC4-207ENST00000575156 ZNF138P52744 262 aa10.29□□□□□ -0.76
ERCC4-207ENST00000575156 IBA57Q5T440 356 aaKnown RBP10.29□□□□□ -0.76
ERCC4-207ENST00000575156 NUDT10Q8NFP7 164 aa10.29□□□□□ -0.76
ERCC4-207ENST00000575156 OR10J6PQ8NGY7 276 aa10.29□□□□□ -0.76
ERCC4-207ENST00000575156 SMIM12Q96EX1 92 aa10.29□□□□□ -0.76
ERCC4-207ENST00000575156 NUDT11Q96G61 164 aa10.29□□□□□ -0.76
ERCC4-207ENST00000575156 ZNF492Q9P255 531 aa10.29□□□□□ -0.76
ERCC4-207ENST00000575156 V9GYV3 84 aa10.29□□□□□ -0.76
ERCC4-207ENST00000575156 IGLV1-51P01701 117 aa10.29□□□□□ -0.76
ERCC4-207ENST00000575156 DEFB131AP59861 70 aa10.29□□□□□ -0.76
ERCC4-207ENST00000575156 ANAPC16Q96DE5 110 aa10.29□□□□□ -0.76
ERCC4-207ENST00000575156 ZNF747Q9BV97 191 aa10.29□□□□□ -0.76
ERCC4-207ENST00000575156 CTDSP1Q9GZU7 261 aa10.29□□□□□ -0.76
ERCC4-207ENST00000575156 C19orf71A6NCJ1 209 aa10.28□□□□□ -0.76
ERCC4-207ENST00000575156 Q6ZQT7 251 aa10.28□□□□□ -0.76
ERCC4-207ENST00000575156 YPEL4Q96NS1 127 aa10.28□□□□□ -0.76
ERCC4-207ENST00000575156 SPAG8Q99932 426 aaPredicted RBP10.28□□□□□ -0.76
ERCC4-207ENST00000575156 OSTCQ9NRP0 149 aa10.28□□□□□ -0.76
ERCC4-207ENST00000575156 TMEM242Q9NWH2 141 aa10.28□□□□□ -0.76
ERCC4-207ENST00000575156 TRAV2A0A0B4J234 112 aa10.27□□□□□ -0.76
ERCC4-207ENST00000575156 TRAV25A0A0B4J276 109 aa10.27□□□□□ -0.76
ERCC4-207ENST00000575156 KNCNA6PVL3 124 aa10.27□□□□□ -0.76
ERCC4-207ENST00000575156 IGKV3-20P01619 116 aa10.27□□□□□ -0.76
ERCC4-207ENST00000575156 SAPCD1Q5SSQ6 148 aa10.27□□□□□ -0.76
ERCC4-207ENST00000575156 MAP6D1Q9H9H5 199 aa10.27□□□□□ -0.76
ERCC4-207ENST00000575156 AGRNO00468 2067 aa10.27□□□□□ -0.77
ERCC4-207ENST00000575156 A0A0J9YX75 114 aa10.27□□□□□ -0.77
ERCC4-207ENST00000575156 FBLL1A6NHQ2 334 aaKnown RBP10.27□□□□□ -0.77
ERCC4-207ENST00000575156 J3KRW8 73 aa10.27□□□□□ -0.77
ERCC4-207ENST00000575156 KIR3DS1Q14943 382 aa10.27□□□□□ -0.77
ERCC4-207ENST00000575156 PRR9Q5T870 116 aa10.27□□□□□ -0.77
ERCC4-207ENST00000575156 FAM231DQ6ZW35 169 aa10.27□□□□□ -0.77
ERCC4-207ENST00000575156 COX8CQ7Z4L0 72 aa10.27□□□□□ -0.77
ERCC4-207ENST00000575156 APRG1Q8IVJ8 170 aa10.27□□□□□ -0.77
ERCC4-207ENST00000575156 C3orf56Q8N813 242 aa10.27□□□□□ -0.77
ERCC4-207ENST00000575156 C15orf54Q8N8G6 183 aa10.27□□□□□ -0.77
ERCC4-207ENST00000575156 OR4C46A6NHA9 309 aa10.26□□□□□ -0.77
ERCC4-207ENST00000575156 COLCA2A8K830 154 aa10.26□□□□□ -0.77
ERCC4-207ENST00000575156 ZNF705GA8MUZ8 300 aaPredicted RBP10.26□□□□□ -0.77
ERCC4-207ENST00000575156 PPP1R2P9O14990 202 aa10.26□□□□□ -0.77
ERCC4-207ENST00000575156 FAM3BP58499 235 aaPredicted RBP10.26□□□□□ -0.77
ERCC4-207ENST00000575156 ELOBQ15370 118 aa10.26□□□□□ -0.77
ERCC4-207ENST00000575156 LINC00477Q96M19 166 aa10.26□□□□□ -0.77
ERCC4-207ENST00000575156 NDFIP1Q9BT67 221 aa10.26□□□□□ -0.77
ERCC4-207ENST00000575156 TUBA4BQ9H853 241 aa10.26□□□□□ -0.77
ERCC4-207ENST00000575156 TGIF2-C20orf24A0A0A6YYL0 155 aa10.26□□□□□ -0.77
ERCC4-207ENST00000575156 GATCO43716 136 aaKnown RBP10.26□□□□□ -0.77
ERCC4-207ENST00000575156 SH2D1AO60880 128 aa10.26□□□□□ -0.77
ERCC4-207ENST00000575156 PFN1P07737 140 aaKnown RBP10.26□□□□□ -0.77
ERCC4-207ENST00000575156 CXCL1P09341 107 aa10.26□□□□□ -0.77
ERCC4-207ENST00000575156 RPL19P84098 196 aaKnown RBP10.26□□□□□ -0.77
ERCC4-207ENST00000575156 ODF3L2Q3SX64 289 aa10.26□□□□□ -0.77
ERCC4-207ENST00000575156 SMUG1Q53HV7 270 aa10.26□□□□□ -0.77
ERCC4-207ENST00000575156 ZFAND2AQ8N6M9 145 aa10.26□□□□□ -0.77
ERCC4-207ENST00000575156 CXorf65A6NEN9 183 aa10.25□□□□□ -0.77
ERCC4-207ENST00000575156 TCL1AP56279 114 aa10.25□□□□□ -0.77
ERCC4-207ENST00000575156 ACTL10Q5JWF8 245 aa10.25□□□□□ -0.77
ERCC4-207ENST00000575156 C12orf54Q6X4T0 127 aa10.25□□□□□ -0.77
ERCC4-207ENST00000575156 TMEM158Q8WZ71 300 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms