RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 BVES-AS1Q5T3Y7 98 aa6.9□□□□□ -1.3
NCBP3-204ENST00000574911 PIP4P2Q8N4L2 257 aa6.9□□□□□ -1.3
NCBP3-204ENST00000574911 EEF1AKMT3Q96AZ1 226 aa6.9□□□□□ -1.3
NCBP3-204ENST00000574911 RNF185Q96GF1 192 aa6.9□□□□□ -1.3
NCBP3-204ENST00000574911 TACC2O95359 2948 aa6.9□□□□□ -1.3
NCBP3-204ENST00000574911 ABCA1O95477 2261 aa6.9□□□□□ -1.31
NCBP3-204ENST00000574911 RELNP78509 3460 aa6.9□□□□□ -1.31
NCBP3-204ENST00000574911 G3V318 75 aa6.9□□□□□ -1.31
NCBP3-204ENST00000574911 NPFFO15130 113 aa6.9□□□□□ -1.31
NCBP3-204ENST00000574911 TCF21O43680 179 aa6.9□□□□□ -1.31
NCBP3-204ENST00000574911 NPYP01303 97 aa6.9□□□□□ -1.31
NCBP3-204ENST00000574911 COX8AP10176 69 aa6.9□□□□□ -1.31
NCBP3-204ENST00000574911 CKS2P33552 79 aa6.9□□□□□ -1.31
NCBP3-204ENST00000574911 CLEC19AQ6UXS0 136 aa6.9□□□□□ -1.31
NCBP3-204ENST00000574911 SLC50A1Q9BRV3 221 aa6.9□□□□□ -1.31
NCBP3-204ENST00000574911 BPESC1Q9GZL8 116 aa6.9□□□□□ -1.31
NCBP3-204ENST00000574911 TRBV7-1A0A0A6YYK4 115 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 CCL25O15444 150 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 NUDT3O95989 172 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 HBDP02042 147 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 ORM1P02763 201 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 LGALS9BQ3B8N2 356 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 LGALS9CQ6DKI2 356 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 RNF182Q8N6D2 247 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 C5orf56Q8N8D9 126 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 DPF1Q92782 380 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 NPFFR1Q9GZQ6 430 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 TRAV8-2A0A0B4J237 113 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 IGHV3-66A0A0C4DH42 116 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 LINC01546A6NGU7 62 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 UBE2V1Q13404 147 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 IL17RELQ6ZVW7 336 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 OR8A1Q8NGG7 326 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 COL25A1Q9BXS0 654 aaPredicted RBP6.89□□□□□ -1.31
NCBP3-204ENST00000574911 MSRB1Q9NZV6 116 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 U3KQE9 123 aa6.89□□□□□ -1.31
NCBP3-204ENST00000574911 CEP295Q9C0D2 2601 aa6.88□□□□□ -1.31
NCBP3-204ENST00000574911 HIST1H1AQ02539 215 aaPredicted RBP6.88□□□□□ -1.31
NCBP3-204ENST00000574911 C12orf54Q6X4T0 127 aa6.88□□□□□ -1.31
NCBP3-204ENST00000574911 C2orf91Q6ZV80 131 aa6.88□□□□□ -1.31
NCBP3-204ENST00000574911 MRPL53Q96EL3 112 aaKnown RBP6.88□□□□□ -1.31
NCBP3-204ENST00000574911 AGPAT4-IT1Q9H0P7 198 aa6.88□□□□□ -1.31
NCBP3-204ENST00000574911 TAX1BP3O14907 124 aa6.88□□□□□ -1.31
NCBP3-204ENST00000574911 PTTG1IPP53801 180 aa6.88□□□□□ -1.31
NCBP3-204ENST00000574911 C19orf54Q5BKX5 351 aa6.88□□□□□ -1.31
NCBP3-204ENST00000574911 ITLN2Q8WWU7 325 aaPredicted RBP6.88□□□□□ -1.31
NCBP3-204ENST00000574911 C19orf84I3L1E1 186 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 PPBPP02775 128 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 FXYD7P58549 80 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 NHLH1Q02575 133 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 FOXE3Q13461 319 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 DEFB125Q8N687 156 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 OR1N2Q8NGR9 330 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 METTL26Q96S19 204 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 ATP6V0BQ99437 205 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 CSMD1Q96PZ7 3565 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 IGKV3D-20A0A0C4DH25 116 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 FGF6P10767 208 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 ATP5G2Q06055 141 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 LY6DQ14210 128 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 PRSS57Q6UWY2 283 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 HIF1ANQ9NWT6 349 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 C11orf21Q9P2W6 132 aa6.87□□□□□ -1.31
NCBP3-204ENST00000574911 IGHV3OR16-13A0A075B7E8 117 aa6.86□□□□□ -1.31
NCBP3-204ENST00000574911 IGHV3-74A0A0B4J1X5 117 aa6.86□□□□□ -1.31
NCBP3-204ENST00000574911 GAS8-AS1O95177 125 aa6.86□□□□□ -1.31
NCBP3-204ENST00000574911 CRIP2P52943 208 aaPredicted RBP6.86□□□□□ -1.31
NCBP3-204ENST00000574911 CACNG7P62955 275 aa6.86□□□□□ -1.31
NCBP3-204ENST00000574911 C8orf86Q6ZUL3 223 aa6.86□□□□□ -1.31
NCBP3-204ENST00000574911 IFI27L1Q96BM0 104 aa6.86□□□□□ -1.31
NCBP3-204ENST00000574911 MAP1LC3AQ9H492 121 aa6.86□□□□□ -1.31
NCBP3-204ENST00000574911 PPP1R14DQ9NXH3 145 aa6.86□□□□□ -1.31
NCBP3-204ENST00000574911 MOB4Q9Y3A3 225 aa6.86□□□□□ -1.31
NCBP3-204ENST00000574911 SPTBN2O15020 2390 aa6.86□□□□□ -1.31
NCBP3-204ENST00000574911 ZNF207O43670 478 aaKnown RBP6.86□□□□□ -1.31
NCBP3-204ENST00000574911 C9orf47Q6ZRZ4 202 aa6.86□□□□□ -1.31
NCBP3-204ENST00000574911 IGHV3-49A0A0A0MS15 119 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 TRAV41A0A0B4J266 112 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 CD5LO43866 347 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 TNFRSF6BO95407 300 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 PPIFP30405 207 aaKnown RBP6.85□□□□□ -1.31
NCBP3-204ENST00000574911 TMEM78Q5T7P6 136 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 TMEM219Q86XT9 240 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 PIFOQ8TCI5 191 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 ABCA4P78363 2273 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 FAM223BA6NKX1 122 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 IGHV4-39P01824 125 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 FAM223AQ8IWN6 122 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 BOD1L2Q8IYS8 172 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 PRORYQ9H606 182 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 PTPRZ1P23471 2315 aaPredicted RBP6.85□□□□□ -1.31
NCBP3-204ENST00000574911 IGHV7-4-1A0A0J9YVY3 117 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 FCER1GP30273 86 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 GLMPQ8WWB7 406 aa6.85□□□□□ -1.31
NCBP3-204ENST00000574911 NXT2Q9NPJ8 142 aaKnown RBP6.85□□□□□ -1.31
NCBP3-204ENST00000574911 IGHV1-69DA0A0B4J2H0 117 aa6.84□□□□□ -1.31
NCBP3-204ENST00000574911 SNAI2O43623 268 aa6.84□□□□□ -1.31
NCBP3-204ENST00000574911 IGHV1-69P01742 117 aa6.84□□□□□ -1.31
NCBP3-204ENST00000574911 UQCRFS1P47985 274 aa6.84□□□□□ -1.31
NCBP3-204ENST00000574911 IGLV2-18A0A075B6J9 118 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 278 ms