RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 TNFSF18Q9UNG2 199 aa8.56□□□□□ -1.04
CCDC40-210ENST00000573903 TRBV19A0A075B6N1 114 aa8.55□□□□□ -1.04
CCDC40-210ENST00000573903 BORCS7-ASMTA0A0B4J1R7 106 aa8.55□□□□□ -1.04
CCDC40-210ENST00000573903 PLAC8L1A1L4L8 177 aa8.55□□□□□ -1.04
CCDC40-210ENST00000573903 RNF222A6NCQ9 220 aa8.55□□□□□ -1.04
CCDC40-210ENST00000573903 H3BQ15 152 aa8.55□□□□□ -1.04
CCDC40-210ENST00000573903 H3BTX0 84 aa8.55□□□□□ -1.04
CCDC40-210ENST00000573903 OR7C2O60412 319 aa8.55□□□□□ -1.04
CCDC40-210ENST00000573903 SNRPCP09234 159 aaKnown RBP8.55□□□□□ -1.04
CCDC40-210ENST00000573903 PYYP10082 97 aa8.55□□□□□ -1.04
CCDC40-210ENST00000573903 TNP2Q05952 138 aa8.55□□□□□ -1.04
CCDC40-210ENST00000573903 Q5BKY6 102 aa8.55□□□□□ -1.04
CCDC40-210ENST00000573903 CCDC28AQ8IWP9 274 aa8.55□□□□□ -1.04
CCDC40-210ENST00000573903 HSD17B11Q8NBQ5 300 aa8.55□□□□□ -1.04
CCDC40-210ENST00000573903 TMEM263Q8WUH6 116 aaKnown RBP8.55□□□□□ -1.04
CCDC40-210ENST00000573903 MRPL53Q96EL3 112 aaKnown RBP8.55□□□□□ -1.04
CCDC40-210ENST00000573903 AAMDCQ9H7C9 122 aa8.55□□□□□ -1.04
CCDC40-210ENST00000573903 ZNF586Q9NXT0 402 aa8.55□□□□□ -1.04
CCDC40-210ENST00000573903 A0A1W2PPV4 95 aa8.54□□□□□ -1.04
CCDC40-210ENST00000573903 H7BYZ3 331 aa8.54□□□□□ -1.04
CCDC40-210ENST00000573903 M6PRP20645 277 aa8.54□□□□□ -1.04
CCDC40-210ENST00000573903 UBE2L3P68036 154 aaKnown RBP8.54□□□□□ -1.04
CCDC40-210ENST00000573903 TTC32Q5I0X7 151 aa8.54□□□□□ -1.04
CCDC40-210ENST00000573903 OR2G3Q8NGZ4 309 aa8.54□□□□□ -1.04
CCDC40-210ENST00000573903 BLNKQ8WV28 456 aa8.54□□□□□ -1.04
CCDC40-210ENST00000573903 RNF141Q8WVD5 230 aa8.54□□□□□ -1.04
CCDC40-210ENST00000573903 SAT2Q96F10 170 aaPredicted RBP8.54□□□□□ -1.04
CCDC40-210ENST00000573903 FAM167A-AS1Q96KT0 104 aa8.54□□□□□ -1.04
CCDC40-210ENST00000573903 C20orf144Q9BQM9 153 aa8.54□□□□□ -1.04
CCDC40-210ENST00000573903 PSMG3Q9BT73 122 aaPredicted RBP8.54□□□□□ -1.04
CCDC40-210ENST00000573903 PAXXQ9BUH6 204 aa8.54□□□□□ -1.04
CCDC40-210ENST00000573903 OR51M1Q9H341 326 aa8.54□□□□□ -1.04
CCDC40-210ENST00000573903 NOP10Q9NPE3 64 aaKnown RBP8.54□□□□□ -1.04
CCDC40-210ENST00000573903 PRELID1Q9Y255 219 aa8.54□□□□□ -1.04
CCDC40-210ENST00000573903 DNAH17Q9UFH2 4485 aa8.53□□□□□ -1.04
CCDC40-210ENST00000573903 ARPC5O15511 151 aa8.53□□□□□ -1.04
CCDC40-210ENST00000573903 OR5I1Q13606 314 aa8.53□□□□□ -1.04
CCDC40-210ENST00000573903 SSX7Q7RTT5 188 aa8.53□□□□□ -1.04
CCDC40-210ENST00000573903 RNASE8Q8TDE3 154 aaKnown RBP8.53□□□□□ -1.04
CCDC40-210ENST00000573903 GNPNAT1Q96EK6 184 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-210ENST00000573903 LINC00588Q9Y4M8 146 aa8.53□□□□□ -1.04
CCDC40-210ENST00000573903 SNURFLB1AK76 121 aa8.52□□□□□ -1.05
CCDC40-210ENST00000573903 G3V3Q6 166 aa8.52□□□□□ -1.05
CCDC40-210ENST00000573903 TAAR5O14804 337 aa8.52□□□□□ -1.05
CCDC40-210ENST00000573903 CDK2AP2O75956 126 aa8.52□□□□□ -1.05
CCDC40-210ENST00000573903 MBP02144 154 aa8.52□□□□□ -1.05
CCDC40-210ENST00000573903 OR10J4P0C629 311 aa8.52□□□□□ -1.05
CCDC40-210ENST00000573903 NBEAP1P0C6P0 100 aa8.52□□□□□ -1.05
CCDC40-210ENST00000573903 ATP6V0CP27449 155 aa8.52□□□□□ -1.05
CCDC40-210ENST00000573903 RAB2AP61019 212 aa8.52□□□□□ -1.05
CCDC40-210ENST00000573903 SERF2P84101 59 aa8.52□□□□□ -1.05
CCDC40-210ENST00000573903 FAM122CQ6P4D5 195 aa8.52□□□□□ -1.05
CCDC40-210ENST00000573903 OR10G4Q8NGN3 311 aa8.52□□□□□ -1.05
CCDC40-210ENST00000573903 OR10G9Q8NGN4 311 aa8.52□□□□□ -1.05
CCDC40-210ENST00000573903 OR10G7Q8NGN6 311 aa8.52□□□□□ -1.05
CCDC40-210ENST00000573903 NDUFB4O95168 129 aa8.51□□□□□ -1.05
CCDC40-210ENST00000573903 CDC34P49427 236 aaPredicted RBP8.51□□□□□ -1.05
CCDC40-210ENST00000573903 RPL7L1Q6DKI1 246 aaKnown RBP8.51□□□□□ -1.05
CCDC40-210ENST00000573903 PQLC2Q6ZP29 291 aa8.51□□□□□ -1.05
CCDC40-210ENST00000573903 MAPKAPK5-AS1Q8N8E1 139 aa8.51□□□□□ -1.05
CCDC40-210ENST00000573903 FXYD5Q96DB9 178 aa8.51□□□□□ -1.05
CCDC40-210ENST00000573903 Q9H8V8 135 aa8.51□□□□□ -1.05
CCDC40-210ENST00000573903 PKD1P98161 4303 aa8.5□□□□□ -1.05
CCDC40-210ENST00000573903 TRAV26-1A0A087WT03 109 aa8.5□□□□□ -1.05
CCDC40-210ENST00000573903 NPIPB6E9PJ23 425 aa8.5□□□□□ -1.05
CCDC40-210ENST00000573903 SMLR1H3BR10 107 aa8.5□□□□□ -1.05
CCDC40-210ENST00000573903 PRB4P10163 310 aaPredicted RBP8.5□□□□□ -1.05
CCDC40-210ENST00000573903 ZNF345Q14585 488 aa8.5□□□□□ -1.05
CCDC40-210ENST00000573903 ICAM4Q14773 271 aa8.5□□□□□ -1.05
CCDC40-210ENST00000573903 LYPD1Q8N2G4 141 aa8.5□□□□□ -1.05
CCDC40-210ENST00000573903 EXOC3-AS1Q8N2X6 119 aa8.5□□□□□ -1.05
CCDC40-210ENST00000573903 RXFP4Q8TDU9 374 aa8.5□□□□□ -1.05
CCDC40-210ENST00000573903 ZNF503Q96F45 646 aa8.5□□□□□ -1.05
CCDC40-210ENST00000573903 PHYHIPLQ96FC7 376 aa8.5□□□□□ -1.05
CCDC40-210ENST00000573903 ODF3Q96PU9 254 aa8.5□□□□□ -1.05
CCDC40-210ENST00000573903 DNAH11Q96DT5 4516 aa8.5□□□□□ -1.05
CCDC40-210ENST00000573903 A0A0J9YY99 117 aa8.49□□□□□ -1.05
CCDC40-210ENST00000573903 GAGE12BA1L429 117 aa8.49□□□□□ -1.05
CCDC40-210ENST00000573903 PRAC2D3DTV9 90 aa8.49□□□□□ -1.05
CCDC40-210ENST00000573903 J3KRW8 73 aa8.49□□□□□ -1.05
CCDC40-210ENST00000573903 M0R3E3 92 aa8.49□□□□□ -1.05
CCDC40-210ENST00000573903 GAGE7O76087 117 aa8.49□□□□□ -1.05
CCDC40-210ENST00000573903 GAGE12FP0CL80 117 aa8.49□□□□□ -1.05
CCDC40-210ENST00000573903 GAGE12GP0CL81 117 aa8.49□□□□□ -1.05
CCDC40-210ENST00000573903 GAGE12IP0CL82 117 aa8.49□□□□□ -1.05
CCDC40-210ENST00000573903 LEPP41159 167 aa8.49□□□□□ -1.05
CCDC40-210ENST00000573903 CSN1S1P47710 185 aa8.49□□□□□ -1.05
CCDC40-210ENST00000573903 FAM74A1Q5RGS3 127 aa8.49□□□□□ -1.05
CCDC40-210ENST00000573903 GFI1BQ5VTD9 330 aa8.49□□□□□ -1.05
CCDC40-210ENST00000573903 SH3BGRL3Q9H299 93 aa8.49□□□□□ -1.05
CCDC40-210ENST00000573903 DYNC1H1Q14204 4646 aaKnown RBP8.49□□□□□ -1.05
CCDC40-210ENST00000573903 HMSDA8MTL9 139 aa8.48□□□□□ -1.05
CCDC40-210ENST00000573903 TMEM78Q5T7P6 136 aa8.48□□□□□ -1.05
CCDC40-210ENST00000573903 SPATA12Q7Z6I5 190 aa8.48□□□□□ -1.05
CCDC40-210ENST00000573903 ARPC5LQ9BPX5 153 aa8.48□□□□□ -1.05
CCDC40-210ENST00000573903 KRTAP4-5Q9BYR2 181 aa8.48□□□□□ -1.05
CCDC40-210ENST00000573903 ACTR3CQ9C0K3 210 aaPredicted RBP8.48□□□□□ -1.05
CCDC40-210ENST00000573903 Q9H3A6 140 aa8.48□□□□□ -1.05
CCDC40-210ENST00000573903 TRAV12-3A0A0B4J271 114 aa8.47□□□□□ -1.05
CCDC40-210ENST00000573903 A0A0D9SG52 128 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms