RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 C15orf53Q8NAA6 179 aa8.96□□□□□ -0.98
NPLOC4-213ENST00000573519 RNF141Q8WVD5 230 aa8.96□□□□□ -0.98
NPLOC4-213ENST00000573519 ZNF503Q96F45 646 aa8.96□□□□□ -0.98
NPLOC4-213ENST00000573519 PHYHIPLQ96FC7 376 aa8.96□□□□□ -0.98
NPLOC4-213ENST00000573519 ATG101Q9BSB4 218 aa8.96□□□□□ -0.98
NPLOC4-213ENST00000573519 PRELID1Q9Y255 219 aa8.96□□□□□ -0.98
NPLOC4-213ENST00000573519 DNAH10Q8IVF4 4471 aa8.95□□□□□ -0.98
NPLOC4-213ENST00000573519 FXYD6-FXYD2A0A087WZ82 144 aa8.95□□□□□ -0.98
NPLOC4-213ENST00000573519 CBY3A6NI87 242 aa8.95□□□□□ -0.98
NPLOC4-213ENST00000573519 SNURFLB1AK76 121 aa8.95□□□□□ -0.98
NPLOC4-213ENST00000573519 RAB2AP61019 212 aa8.95□□□□□ -0.98
NPLOC4-213ENST00000573519 HSD17B11Q8NBQ5 300 aa8.95□□□□□ -0.98
NPLOC4-213ENST00000573519 AQP10Q96PS8 301 aa8.95□□□□□ -0.98
NPLOC4-213ENST00000573519 ODF3Q96PU9 254 aa8.95□□□□□ -0.98
NPLOC4-213ENST00000573519 IGKV2-40A0A087WW87 121 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-213ENST00000573519 GAGE12BA1L429 117 aa8.94□□□□□ -0.98
NPLOC4-213ENST00000573519 GAGE7O76087 117 aa8.94□□□□□ -0.98
NPLOC4-213ENST00000573519 IGKV2D-40P01614 121 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-213ENST00000573519 SLC25A5P05141 298 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-213ENST00000573519 GAGE12FP0CL80 117 aa8.94□□□□□ -0.98
NPLOC4-213ENST00000573519 GAGE12GP0CL81 117 aa8.94□□□□□ -0.98
NPLOC4-213ENST00000573519 GAGE12IP0CL82 117 aa8.94□□□□□ -0.98
NPLOC4-213ENST00000573519 UBE2L3P68036 154 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-213ENST00000573519 ACOT6Q3I5F7 207 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-213ENST00000573519 RNF212Q495C1 297 aa8.94□□□□□ -0.98
NPLOC4-213ENST00000573519 OR2T35Q8NGX2 323 aa8.94□□□□□ -0.98
NPLOC4-213ENST00000573519 AGPAT4-IT1Q9H0P7 198 aa8.94□□□□□ -0.98
NPLOC4-213ENST00000573519 DNAH6Q9C0G6 4158 aa8.94□□□□□ -0.98
NPLOC4-213ENST00000573519 C7orf71A4D174 169 aa8.93□□□□□ -0.98
NPLOC4-213ENST00000573519 HMGB3O15347 200 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-213ENST00000573519 M6PRP20645 277 aa8.93□□□□□ -0.98
NPLOC4-213ENST00000573519 RNASE4P34096 147 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-213ENST00000573519 RANP62826 216 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-213ENST00000573519 BTN1A1Q13410 526 aa8.93□□□□□ -0.98
NPLOC4-213ENST00000573519 OR5I1Q13606 314 aa8.93□□□□□ -0.98
NPLOC4-213ENST00000573519 TMEM78Q5T7P6 136 aa8.93□□□□□ -0.98
NPLOC4-213ENST00000573519 LINC00336Q6ZUF6 198 aa8.93□□□□□ -0.98
NPLOC4-213ENST00000573519 INO80EQ8NBZ0 244 aaPredicted RBP8.93□□□□□ -0.98
NPLOC4-213ENST00000573519 ASB13Q8WXK3 278 aa8.93□□□□□ -0.98
NPLOC4-213ENST00000573519 LINC00477Q96M19 166 aa8.93□□□□□ -0.98
NPLOC4-213ENST00000573519 VGLL1Q99990 258 aa8.93□□□□□ -0.98
NPLOC4-213ENST00000573519 PYGO2Q9BRQ0 406 aa8.93□□□□□ -0.98
NPLOC4-213ENST00000573519 RNF222A6NCQ9 220 aa8.92□□□□□ -0.98
NPLOC4-213ENST00000573519 SMLR1H3BR10 107 aa8.92□□□□□ -0.98
NPLOC4-213ENST00000573519 GPX1P07203 203 aa8.92□□□□□ -0.98
NPLOC4-213ENST00000573519 ATP6V0CP27449 155 aa8.92□□□□□ -0.98
NPLOC4-213ENST00000573519 TAS2R45P59539 299 aa8.92□□□□□ -0.98
NPLOC4-213ENST00000573519 CD300CQ08708 224 aa8.92□□□□□ -0.98
NPLOC4-213ENST00000573519 ZNF266Q14584 549 aa8.92□□□□□ -0.98
NPLOC4-213ENST00000573519 LGALS9BQ3B8N2 356 aa8.92□□□□□ -0.98
NPLOC4-213ENST00000573519 KHDC3LQ587J8 217 aa8.92□□□□□ -0.98
NPLOC4-213ENST00000573519 OR10G4Q8NGN3 311 aa8.92□□□□□ -0.98
NPLOC4-213ENST00000573519 OR10G9Q8NGN4 311 aa8.92□□□□□ -0.98
NPLOC4-213ENST00000573519 OR10G7Q8NGN6 311 aa8.92□□□□□ -0.98
NPLOC4-213ENST00000573519 Q9H3A6 140 aa8.92□□□□□ -0.98
NPLOC4-213ENST00000573519 TNFSF18Q9UNG2 199 aa8.92□□□□□ -0.98
NPLOC4-213ENST00000573519 A0A1W2PPV4 95 aa8.91□□□□□ -0.98
NPLOC4-213ENST00000573519 PRSS29PA6NIE9 313 aa8.91□□□□□ -0.98
NPLOC4-213ENST00000573519 KLLNB2CW77 178 aa8.91□□□□□ -0.98
NPLOC4-213ENST00000573519 G3V3Q6 166 aa8.91□□□□□ -0.98
NPLOC4-213ENST00000573519 CSN1S1P47710 185 aa8.91□□□□□ -0.98
NPLOC4-213ENST00000573519 RPL7L1Q6DKI1 246 aaKnown RBP8.91□□□□□ -0.98
NPLOC4-213ENST00000573519 C9orf47Q6ZRZ4 202 aa8.91□□□□□ -0.98
NPLOC4-213ENST00000573519 SH3BGRL3Q9H299 93 aa8.91□□□□□ -0.98
NPLOC4-213ENST00000573519 HECTD4Q9Y4D8 3996 aa8.9□□□□□ -0.98
NPLOC4-213ENST00000573519 A0A0J9YY99 117 aa8.9□□□□□ -0.98
NPLOC4-213ENST00000573519 RGS13O14921 159 aa8.9□□□□□ -0.98
NPLOC4-213ENST00000573519 CCL18P55774 89 aa8.9□□□□□ -0.98
NPLOC4-213ENST00000573519 ZNF680Q8NEM1 530 aa8.9□□□□□ -0.98
NPLOC4-213ENST00000573519 Q8TAT8 98 aa8.9□□□□□ -0.98
NPLOC4-213ENST00000573519 FAM19A4Q96LR4 140 aa8.9□□□□□ -0.98
NPLOC4-213ENST00000573519 HYLS1Q96M11 299 aa8.9□□□□□ -0.98
NPLOC4-213ENST00000573519 GSN-AS1Q9NRJ2 163 aa8.9□□□□□ -0.98
NPLOC4-213ENST00000573519 TRGV2A0A075B6R0 118 aa8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 TRAV26-1A0A087WT03 109 aa8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 RTL8CO15255 209 aa8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 ZNF324O75467 553 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 CRISP2P16562 243 aa8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 CDC34P49427 236 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 ZNF138P52744 262 aa8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 PRR9Q5T870 116 aa8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 Q6ZQT7 251 aa8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 Q6ZTI0 123 aa8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 EIF4E3Q8N5X7 224 aaKnown RBP8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 LINC00612Q8N6U2 182 aa8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 OR2G3Q8NGZ4 309 aa8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 GNPNAT1Q96EK6 184 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 PSMG3Q9BT73 122 aaPredicted RBP8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 TMPRSS5Q9H3S3 457 aa8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 ZNF492Q9P255 531 aa8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 RPH3ALQ9UNE2 315 aa8.89□□□□□ -0.99
NPLOC4-213ENST00000573519 TRGV1A0A0A0MS02 117 aa8.88□□□□□ -0.99
NPLOC4-213ENST00000573519 BORCS7-ASMTA0A0B4J1R7 106 aa8.88□□□□□ -0.99
NPLOC4-213ENST00000573519 PGPA6NDG6 321 aa8.88□□□□□ -0.99
NPLOC4-213ENST00000573519 ARPC5O15511 151 aa8.88□□□□□ -0.99
NPLOC4-213ENST00000573519 ARL14EPLP0DKL9 152 aa8.88□□□□□ -0.99
NPLOC4-213ENST00000573519 HOXA5P20719 270 aa8.88□□□□□ -0.99
NPLOC4-213ENST00000573519 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
NPLOC4-213ENST00000573519 DAZ2Q13117 558 aaKnown RBP8.88□□□□□ -0.99
NPLOC4-213ENST00000573519 SOHLH1Q5JUK2 328 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms