RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 DMXL1Q9Y485 3027 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 CIDEAO60543 219 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 CD7P09564 240 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 PMCHL1Q16048 86 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 HIST3H2BBQ8N257 126 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 LYPD1Q8N2G4 141 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 IMMP2LQ96T52 175 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 MCRIP2Q9BUT9 160 aaKnown RBP7.89□□□□□ -1.15
SMG6-213ENST00000573166 PDE6HQ13956 83 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 DGAT2L7PQ6IED9 249 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 Q8TAT8 98 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 FANCD2OSQ96PS1 177 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 HIST1H2BLQ99880 126 aa7.89□□□□□ -1.15
SMG6-213ENST00000573166 TRAV21A0A0B4J279 112 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 SLC17A3O00476 420 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 RNF182Q8N6D2 247 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 UQCR10Q9UDW1 63 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 SMPXQ9UHP9 88 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 P0C879 139 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 ZNF138P52744 262 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 FXYD7P58549 80 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 EIF4EBP1Q13541 118 aaPredicted RBP7.88□□□□□ -1.15
SMG6-213ENST00000573166 KIAA1644Q3SXP7 199 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 Q6ZSV7 163 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 IGHV4OR15-8A0A075B7B6 117 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 A0A087WW49 117 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 PRR20EP86478 221 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 PRR20CP86479 221 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 PRR20DP86480 221 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 PRR20BP86481 221 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 PRR20AP86496 221 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 TMEM97Q5BJF2 176 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 SDF2L1Q9HCN8 221 aa7.88□□□□□ -1.15
SMG6-213ENST00000573166 KCNS1Q96KK3 526 aa7.87□□□□□ -1.15
SMG6-213ENST00000573166 DERL1Q9BUN8 251 aa7.87□□□□□ -1.15
SMG6-213ENST00000573166 A6NDN8 102 aa7.87□□□□□ -1.15
SMG6-213ENST00000573166 IFITM10A6NMD0 228 aa7.87□□□□□ -1.15
SMG6-213ENST00000573166 INS-IGF2F8WCM5 200 aa7.87□□□□□ -1.15
SMG6-213ENST00000573166 H3BRN7 92 aa7.87□□□□□ -1.15
SMG6-213ENST00000573166 HTN3P15516 51 aa7.87□□□□□ -1.15
SMG6-213ENST00000573166 LSM4Q9Y4Z0 139 aaKnown RBP7.87□□□□□ -1.15
SMG6-213ENST00000573166 ITPR3Q14573 2671 aa7.87□□□□□ -1.15
SMG6-213ENST00000573166 TMEM89A2RUT3 159 aa7.87□□□□□ -1.15
SMG6-213ENST00000573166 IGF1P05019 195 aa7.87□□□□□ -1.15
SMG6-213ENST00000573166 OCC1Q8TAD7 63 aa7.87□□□□□ -1.15
SMG6-213ENST00000573166 LINC00477Q96M19 166 aa7.87□□□□□ -1.15
SMG6-213ENST00000573166 RNASE7Q9H1E1 156 aaKnown RBP7.87□□□□□ -1.15
SMG6-213ENST00000573166 TRBV19A0A075B6N1 114 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 TRGV2A0A075B6R0 118 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.86□□□□□ -1.15
SMG6-213ENST00000573166 IGHG4P01861 327 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 FAM90A2PQ658T7 463 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 TMEM190Q8WZ59 177 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 MRPL36Q9P0J6 103 aaKnown RBP7.86□□□□□ -1.15
SMG6-213ENST00000573166 FLNAP21333 2647 aaKnown RBP7.86□□□□□ -1.15
SMG6-213ENST00000573166 RPL23P62829 140 aaKnown RBP7.86□□□□□ -1.15
SMG6-213ENST00000573166 SPATA45Q537H7 98 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 C14orf144Q96I85 54 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 FREM2Q5SZK8 3169 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 CKS2P33552 79 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 HILS1P60008 231 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 ZNF56Q15929 161 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 ZNF726P1Q15940 193 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 RPP21Q9H633 154 aaKnown RBP7.86□□□□□ -1.15
SMG6-213ENST00000573166 TRBV9A0A0B4J1U6 114 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 AMBPP02760 352 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 CD28P10747 220 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 CBLN1P23435 193 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 PPIFP30405 207 aaKnown RBP7.86□□□□□ -1.15
SMG6-213ENST00000573166 NEU1Q99519 415 aa7.86□□□□□ -1.15
SMG6-213ENST00000573166 TRAV12-3A0A0B4J271 114 aa7.85□□□□□ -1.15
SMG6-213ENST00000573166 SRIP30626 198 aa7.85□□□□□ -1.15
SMG6-213ENST00000573166 MAJINQ3KP22 176 aa7.85□□□□□ -1.15
SMG6-213ENST00000573166 OR9G4Q8NGQ1 327 aa7.85□□□□□ -1.15
SMG6-213ENST00000573166 LINC00479Q96M42 142 aa7.85□□□□□ -1.15
SMG6-213ENST00000573166 C1QTNF4Q9BXJ3 329 aa7.85□□□□□ -1.15
SMG6-213ENST00000573166 SCGB1C2P0DMR2 95 aa7.85□□□□□ -1.15
SMG6-213ENST00000573166 FER1L6-AS1Q8NA97 138 aa7.85□□□□□ -1.15
SMG6-213ENST00000573166 SLC25A2Q9BXI2 301 aa7.85□□□□□ -1.15
SMG6-213ENST00000573166 LEPROTL1O95214 131 aa7.85□□□□□ -1.15
SMG6-213ENST00000573166 TRBV12-3P01733 135 aa7.85□□□□□ -1.15
SMG6-213ENST00000573166 CRYGBP07316 175 aa7.85□□□□□ -1.15
SMG6-213ENST00000573166 ERCC8Q13216 396 aa7.85□□□□□ -1.15
SMG6-213ENST00000573166 VWC2Q2TAL6 325 aa7.85□□□□□ -1.15
SMG6-213ENST00000573166 OR8A1Q8NGG7 326 aa7.85□□□□□ -1.15
SMG6-213ENST00000573166 HINT1P49773 126 aaPredicted RBP7.84□□□□□ -1.15
SMG6-213ENST00000573166 PAX2Q02962 417 aa7.84□□□□□ -1.15
SMG6-213ENST00000573166 RNASE1P07998 156 aaKnown RBP7.84□□□□□ -1.15
SMG6-213ENST00000573166 Q1RN00 199 aa7.84□□□□□ -1.15
SMG6-213ENST00000573166 LYRM7Q5U5X0 104 aa7.84□□□□□ -1.15
SMG6-213ENST00000573166 C10orf99Q6UWK7 81 aa7.84□□□□□ -1.15
SMG6-213ENST00000573166 Q8N6K4 173 aa7.84□□□□□ -1.15
SMG6-213ENST00000573166 LYPD6BQ8NI32 183 aa7.84□□□□□ -1.15
SMG6-213ENST00000573166 XCL2Q9UBD3 114 aa7.84□□□□□ -1.15
SMG6-213ENST00000573166 IGKV1OR2-108A0A075B7D4 117 aa7.84□□□□□ -1.15
SMG6-213ENST00000573166 A0A1B0GUT8 65 aa7.84□□□□□ -1.15
SMG6-213ENST00000573166 TMEM256Q8N2U0 113 aa7.84□□□□□ -1.15
SMG6-213ENST00000573166 MYCNOSP40205 109 aa7.83□□□□□ -1.16
SMG6-213ENST00000573166 ASPHD1Q5U4P2 390 aa7.83□□□□□ -1.16
SMG6-213ENST00000573166 DMRTA1Q5VZB9 504 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms