RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 C2CD4CQ8TF44 421 aa10.04□□□□□ -0.8
RPAIN-211ENST00000572174 TMED6Q8WW62 240 aa10.04□□□□□ -0.8
RPAIN-211ENST00000572174 PYGO2Q9BRQ0 406 aa10.04□□□□□ -0.8
RPAIN-211ENST00000572174 LENEPQ9Y5L5 61 aa10.04□□□□□ -0.8
RPAIN-211ENST00000572174 C7orf71A4D174 169 aa10.03□□□□□ -0.8
RPAIN-211ENST00000572174 LYRM9A8MSI8 78 aa10.03□□□□□ -0.8
RPAIN-211ENST00000572174 UMAD1C9J7I0 102 aa10.03□□□□□ -0.8
RPAIN-211ENST00000572174 BCL2L11O43521 198 aa10.03□□□□□ -0.8
RPAIN-211ENST00000572174 CT45A10P0DMU9 189 aa10.03□□□□□ -0.8
RPAIN-211ENST00000572174 CRISP2P16562 243 aa10.03□□□□□ -0.8
RPAIN-211ENST00000572174 GCHFRP30047 84 aa10.03□□□□□ -0.8
RPAIN-211ENST00000572174 EMP1P54849 157 aa10.03□□□□□ -0.8
RPAIN-211ENST00000572174 TCTE3Q8IZS6 198 aa10.03□□□□□ -0.8
RPAIN-211ENST00000572174 TMEM263Q8WUH6 116 aaKnown RBP10.03□□□□□ -0.8
RPAIN-211ENST00000572174 NKX6-2Q9C056 277 aaPredicted RBP10.03□□□□□ -0.8
RPAIN-211ENST00000572174 IGKV2-40A0A087WW87 121 aaPredicted RBP10.02□□□□□ -0.81
RPAIN-211ENST00000572174 LCE6AA0A183 80 aa10.02□□□□□ -0.81
RPAIN-211ENST00000572174 FBLL1A6NHQ2 334 aaKnown RBP10.02□□□□□ -0.81
RPAIN-211ENST00000572174 KLLNB2CW77 178 aa10.02□□□□□ -0.81
RPAIN-211ENST00000572174 SMLR1H3BR10 107 aa10.02□□□□□ -0.81
RPAIN-211ENST00000572174 IGKV2D-40P01614 121 aaPredicted RBP10.02□□□□□ -0.81
RPAIN-211ENST00000572174 GPX1P07203 203 aa10.02□□□□□ -0.81
RPAIN-211ENST00000572174 ZNF138P52744 262 aa10.02□□□□□ -0.81
RPAIN-211ENST00000572174 GFI1BQ5VTD9 330 aa10.02□□□□□ -0.81
RPAIN-211ENST00000572174 Q6ZNX1 250 aa10.02□□□□□ -0.81
RPAIN-211ENST00000572174 C5orf17Q8NAS9 161 aa10.02□□□□□ -0.81
RPAIN-211ENST00000572174 STOML3Q8TAV4 291 aa10.02□□□□□ -0.81
RPAIN-211ENST00000572174 ST6GAL2Q96JF0 529 aa10.02□□□□□ -0.81
RPAIN-211ENST00000572174 ZNF471Q9BX82 626 aaPredicted RBP10.02□□□□□ -0.81
RPAIN-211ENST00000572174 ZNF492Q9P255 531 aa10.02□□□□□ -0.81
RPAIN-211ENST00000572174 DKK2Q9UBU2 259 aa10.02□□□□□ -0.81
RPAIN-211ENST00000572174 YTHDF2Q9Y5A9 579 aaKnown RBP10.02□□□□□ -0.81
RPAIN-211ENST00000572174 TENM2Q9NT68 2774 aa10.02□□□□□ -0.81
RPAIN-211ENST00000572174 PGPA6NDG6 321 aa10.01□□□□□ -0.81
RPAIN-211ENST00000572174 DIRC3C9JPN6 131 aa10.01□□□□□ -0.81
RPAIN-211ENST00000572174 SEC11BP0C7V7 166 aa10.01□□□□□ -0.81
RPAIN-211ENST00000572174 FAM222AQ5U5X8 452 aa10.01□□□□□ -0.81
RPAIN-211ENST00000572174 EIF5AL1Q6IS14 154 aaKnown RBP10.01□□□□□ -0.81
RPAIN-211ENST00000572174 IQCF2Q8IXL9 164 aa10.01□□□□□ -0.81
RPAIN-211ENST00000572174 ZNF680Q8NEM1 530 aa10.01□□□□□ -0.81
RPAIN-211ENST00000572174 AGPAT4-IT1Q9H0P7 198 aa10.01□□□□□ -0.81
RPAIN-211ENST00000572174 CYTL1Q9NRR1 136 aa10.01□□□□□ -0.81
RPAIN-211ENST00000572174 DNAH7Q8WXX0 4024 aa10.01□□□□□ -0.81
RPAIN-211ENST00000572174 A0A1W2PRE2 83 aa10□□□□□ -0.81
RPAIN-211ENST00000572174 ZNF705GA8MUZ8 300 aaPredicted RBP10□□□□□ -0.81
RPAIN-211ENST00000572174 HMGB3O15347 200 aaKnown RBP10□□□□□ -0.81
RPAIN-211ENST00000572174 TPT1P13693 172 aaKnown RBP10□□□□□ -0.81
RPAIN-211ENST00000572174 DAD1P61803 113 aa10□□□□□ -0.81
RPAIN-211ENST00000572174 ERCC8Q13216 396 aa10□□□□□ -0.81
RPAIN-211ENST00000572174 DPPA3Q6W0C5 159 aa10□□□□□ -0.81
RPAIN-211ENST00000572174 Q6ZTC4 211 aa10□□□□□ -0.81
RPAIN-211ENST00000572174 AKAP14Q86UN6 197 aa10□□□□□ -0.81
RPAIN-211ENST00000572174 OR11H4Q8NGC9 324 aa10□□□□□ -0.81
RPAIN-211ENST00000572174 SUN5Q8TC36 379 aa10□□□□□ -0.81
RPAIN-211ENST00000572174 FAM210BQ96KR6 192 aa10□□□□□ -0.81
RPAIN-211ENST00000572174 FAM19A4Q96LR4 140 aa10□□□□□ -0.81
RPAIN-211ENST00000572174 HYLS1Q96M11 299 aa10□□□□□ -0.81
RPAIN-211ENST00000572174 NDFIP1Q9BT67 221 aa10□□□□□ -0.81
RPAIN-211ENST00000572174 CELA1Q9UNI1 258 aa10□□□□□ -0.81
RPAIN-211ENST00000572174 TIMM8BQ9Y5J9 83 aaPredicted RBP10□□□□□ -0.81
RPAIN-211ENST00000572174 DEFB131BA0A096LNP1 70 aa9.99□□□□□ -0.81
RPAIN-211ENST00000572174 TRAV12-3A0A0B4J271 114 aa9.99□□□□□ -0.81
RPAIN-211ENST00000572174 SNURFLB1AK76 121 aa9.99□□□□□ -0.81
RPAIN-211ENST00000572174 J3KRW8 73 aa9.99□□□□□ -0.81
RPAIN-211ENST00000572174 HTN1P15515 57 aa9.99□□□□□ -0.81
RPAIN-211ENST00000572174 C12orf74Q32Q52 190 aa9.99□□□□□ -0.81
RPAIN-211ENST00000572174 RNASE8Q8TDE3 154 aaKnown RBP9.99□□□□□ -0.81
RPAIN-211ENST00000572174 VGLL1Q99990 258 aa9.99□□□□□ -0.81
RPAIN-211ENST00000572174 LINC00467Q9BRT7 94 aa9.99□□□□□ -0.81
RPAIN-211ENST00000572174 RPH3ALQ9UNE2 315 aa9.99□□□□□ -0.81
RPAIN-211ENST00000572174 MAP1LC3B2A6NCE7 125 aa9.98□□□□□ -0.81
RPAIN-211ENST00000572174 C1QBP02746 253 aa9.98□□□□□ -0.81
RPAIN-211ENST00000572174 TMUB2Q71RG4 321 aa9.98□□□□□ -0.81
RPAIN-211ENST00000572174 TCEAL7Q9BRU2 100 aa9.98□□□□□ -0.81
RPAIN-211ENST00000572174 MAP1LC3BQ9GZQ8 125 aa9.98□□□□□ -0.81
RPAIN-211ENST00000572174 ARL2-SNX15V9GYD0 113 aa9.98□□□□□ -0.81
RPAIN-211ENST00000572174 RGS13O14921 159 aa9.97□□□□□ -0.81
RPAIN-211ENST00000572174 PRB4P10163 310 aaPredicted RBP9.97□□□□□ -0.81
RPAIN-211ENST00000572174 RNASE4P34096 147 aaKnown RBP9.97□□□□□ -0.81
RPAIN-211ENST00000572174 PPT1P50897 306 aa9.97□□□□□ -0.81
RPAIN-211ENST00000572174 ANXA2RQ3ZCQ2 193 aa9.97□□□□□ -0.81
RPAIN-211ENST00000572174 LGALSLQ3ZCW2 172 aaPredicted RBP9.97□□□□□ -0.81
RPAIN-211ENST00000572174 ZFP69Q49AA0 526 aa9.97□□□□□ -0.81
RPAIN-211ENST00000572174 GOLT1AQ6ZVE7 132 aa9.97□□□□□ -0.81
RPAIN-211ENST00000572174 EIF4E3Q8N5X7 224 aaKnown RBP9.97□□□□□ -0.81
RPAIN-211ENST00000572174 ZFAND2AQ8N6M9 145 aa9.97□□□□□ -0.81
RPAIN-211ENST00000572174 CSMD3Q7Z407 3707 aa9.97□□□□□ -0.81
RPAIN-211ENST00000572174 IGLL5B9A064 214 aa9.96□□□□□ -0.82
RPAIN-211ENST00000572174 TEX46H3BTG2 121 aa9.96□□□□□ -0.82
RPAIN-211ENST00000572174 EIF3GO75821 320 aaKnown RBP eCLIP9.96□□□□□ -0.82
RPAIN-211ENST00000572174 TCRAP04437 139 aa9.96□□□□□ -0.82
RPAIN-211ENST00000572174 RAB5CP51148 216 aa9.96□□□□□ -0.82
RPAIN-211ENST00000572174 BTN1A1Q13410 526 aa9.96□□□□□ -0.82
RPAIN-211ENST00000572174 CYB561D1Q8N8Q1 229 aa9.96□□□□□ -0.82
RPAIN-211ENST00000572174 Q8TAT8 98 aa9.96□□□□□ -0.82
RPAIN-211ENST00000572174 ATG101Q9BSB4 218 aa9.96□□□□□ -0.82
RPAIN-211ENST00000572174 NDUFAF3Q9BU61 184 aa9.96□□□□□ -0.82
RPAIN-211ENST00000572174 CBY3A6NI87 242 aa9.95□□□□□ -0.82
RPAIN-211ENST00000572174 F6UZH7 168 aa9.95□□□□□ -0.82
RPAIN-211ENST00000572174 ZNF324O75467 553 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms