RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 ACOT6Q3I5F7 207 aaPredicted RBP7.26□□□□□ -1.25
GTF3C1-213ENST00000571886 LGALS9CQ6DKI2 356 aa7.26□□□□□ -1.25
GTF3C1-213ENST00000571886 OR2T35Q8NGX2 323 aa7.26□□□□□ -1.25
GTF3C1-213ENST00000571886 ASB13Q8WXK3 278 aa7.26□□□□□ -1.25
GTF3C1-213ENST00000571886 SH3BGRL3Q9H299 93 aa7.26□□□□□ -1.25
GTF3C1-213ENST00000571886 Q9H3A6 140 aa7.26□□□□□ -1.25
GTF3C1-213ENST00000571886 TNFSF18Q9UNG2 199 aa7.26□□□□□ -1.25
GTF3C1-213ENST00000571886 KMT2AQ03164 3969 aa7.26□□□□□ -1.25
GTF3C1-213ENST00000571886 HTN3P15516 51 aa7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 TSPOP30536 169 aa7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 TCTAP57738 103 aa7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 UBE2L3P68036 154 aaKnown RBP7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 BTN1A1Q13410 526 aa7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 PRR9Q5T870 116 aa7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 RPL7L1Q6DKI1 246 aaKnown RBP7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 C9orf47Q6ZRZ4 202 aa7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 SLC7A5P1Q8MH63 180 aa7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 TMEM256Q8N2U0 113 aa7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 OR10G4Q8NGN3 311 aa7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 OR10G9Q8NGN4 311 aa7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 OR10G7Q8NGN6 311 aa7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 LINC00477Q96M19 166 aa7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 ODF3Q96PU9 254 aa7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 AAMDCQ9H7C9 122 aa7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 VPS13DQ5THJ4 4388 aa7.25□□□□□ -1.25
GTF3C1-213ENST00000571886 A0A1W2PPV4 95 aa7.24□□□□□ -1.25
GTF3C1-213ENST00000571886 KLLNB2CW77 178 aa7.24□□□□□ -1.25
GTF3C1-213ENST00000571886 ZNF324O75467 553 aaPredicted RBP7.24□□□□□ -1.25
GTF3C1-213ENST00000571886 LEPP41159 167 aa7.24□□□□□ -1.25
GTF3C1-213ENST00000571886 DAD1P61803 113 aa7.24□□□□□ -1.25
GTF3C1-213ENST00000571886 ZNF266Q14584 549 aa7.24□□□□□ -1.25
GTF3C1-213ENST00000571886 KHDC3LQ587J8 217 aa7.24□□□□□ -1.25
GTF3C1-213ENST00000571886 SSX7Q7RTT5 188 aa7.24□□□□□ -1.25
GTF3C1-213ENST00000571886 C9orf62Q8N4C0 152 aa7.24□□□□□ -1.25
GTF3C1-213ENST00000571886 ZFAND2AQ8N6M9 145 aa7.24□□□□□ -1.25
GTF3C1-213ENST00000571886 OR2G3Q8NGZ4 309 aa7.24□□□□□ -1.25
GTF3C1-213ENST00000571886 RNASE8Q8TDE3 154 aaKnown RBP7.24□□□□□ -1.25
GTF3C1-213ENST00000571886 C20orf144Q9BQM9 153 aa7.24□□□□□ -1.25
GTF3C1-213ENST00000571886 ZNF492Q9P255 531 aa7.24□□□□□ -1.25
GTF3C1-213ENST00000571886 BOLA1Q9Y3E2 137 aa7.24□□□□□ -1.25
GTF3C1-213ENST00000571886 C7orf71A4D174 169 aa7.23□□□□□ -1.25
GTF3C1-213ENST00000571886 PGPA6NDG6 321 aa7.23□□□□□ -1.25
GTF3C1-213ENST00000571886 DIRC3C9JPN6 131 aa7.23□□□□□ -1.25
GTF3C1-213ENST00000571886 H7BYZ3 331 aa7.23□□□□□ -1.25
GTF3C1-213ENST00000571886 DEFB130BP0DP73 79 aa7.23□□□□□ -1.25
GTF3C1-213ENST00000571886 DEFB130AP0DP74 79 aa7.23□□□□□ -1.25
GTF3C1-213ENST00000571886 CRISP2P16562 243 aa7.23□□□□□ -1.25
GTF3C1-213ENST00000571886 RNASE4P34096 147 aaKnown RBP7.23□□□□□ -1.25
GTF3C1-213ENST00000571886 TAS2R45P59539 299 aa7.23□□□□□ -1.25
GTF3C1-213ENST00000571886 INO80EQ8NBZ0 244 aaPredicted RBP7.23□□□□□ -1.25
GTF3C1-213ENST00000571886 Q8TAT8 98 aa7.23□□□□□ -1.25
GTF3C1-213ENST00000571886 PSMG3Q9BT73 122 aaPredicted RBP7.23□□□□□ -1.25
GTF3C1-213ENST00000571886 NOP10Q9NPE3 64 aaKnown RBP7.23□□□□□ -1.25
GTF3C1-213ENST00000571886 CYTL1Q9NRR1 136 aa7.23□□□□□ -1.25
GTF3C1-213ENST00000571886 LYRM9A8MSI8 78 aa7.22□□□□□ -1.25
GTF3C1-213ENST00000571886 SLC25A5P05141 298 aaKnown RBP7.22□□□□□ -1.25
GTF3C1-213ENST00000571886 STAG3L2P0CL84 134 aa7.22□□□□□ -1.25
GTF3C1-213ENST00000571886 STAG3L3P0CL85 134 aa7.22□□□□□ -1.25
GTF3C1-213ENST00000571886 ARL14EPLP0DKL9 152 aa7.22□□□□□ -1.25
GTF3C1-213ENST00000571886 CDC34P49427 236 aaPredicted RBP7.22□□□□□ -1.25
GTF3C1-213ENST00000571886 PQLC2Q6ZP29 291 aa7.22□□□□□ -1.25
GTF3C1-213ENST00000571886 LYPD1Q8N2G4 141 aa7.22□□□□□ -1.25
GTF3C1-213ENST00000571886 OR11H4Q8NGC9 324 aa7.22□□□□□ -1.25
GTF3C1-213ENST00000571886 TMEM263Q8WUH6 116 aaKnown RBP7.22□□□□□ -1.25
GTF3C1-213ENST00000571886 RAB24Q969Q5 203 aa7.22□□□□□ -1.25
GTF3C1-213ENST00000571886 C16orf74Q96GX8 76 aa7.22□□□□□ -1.25
GTF3C1-213ENST00000571886 TP53TG3Q9ULZ0 132 aa7.22□□□□□ -1.25
GTF3C1-213ENST00000571886 TEX48A0A1B0GUV7 120 aa7.21□□□□□ -1.26
GTF3C1-213ENST00000571886 HMSDA8MTL9 139 aa7.21□□□□□ -1.26
GTF3C1-213ENST00000571886 ARPC5O15511 151 aa7.21□□□□□ -1.26
GTF3C1-213ENST00000571886 GPX1P07203 203 aa7.21□□□□□ -1.26
GTF3C1-213ENST00000571886 ZNF138P52744 262 aa7.21□□□□□ -1.26
GTF3C1-213ENST00000571886 GNG5P63218 68 aa7.21□□□□□ -1.26
GTF3C1-213ENST00000571886 SERF2P84101 59 aa7.21□□□□□ -1.26
GTF3C1-213ENST00000571886 ZNF726P1Q15940 193 aa7.21□□□□□ -1.26
GTF3C1-213ENST00000571886 TMEM78Q5T7P6 136 aa7.21□□□□□ -1.26
GTF3C1-213ENST00000571886 TMEM88Q6PEY1 159 aa7.21□□□□□ -1.26
GTF3C1-213ENST00000571886 TVP23CQ96ET8 276 aa7.21□□□□□ -1.26
GTF3C1-213ENST00000571886 NDUFAF3Q9BU61 184 aa7.21□□□□□ -1.26
GTF3C1-213ENST00000571886 OTORQ9NRC9 128 aa7.21□□□□□ -1.26
GTF3C1-213ENST00000571886 RPH3ALQ9UNE2 315 aa7.21□□□□□ -1.26
GTF3C1-213ENST00000571886 TIMM8BQ9Y5J9 83 aaPredicted RBP7.21□□□□□ -1.26
GTF3C1-213ENST00000571886 RBAKDNA6NC62 111 aa7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 GCHFRP30047 84 aa7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 CSN1S1P47710 185 aa7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 LGALSLQ3ZCW2 172 aaPredicted RBP7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 ZNF493Q6ZR52 646 aa7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 CCDC28AQ8IWP9 274 aa7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 LINC00612Q8N6U2 182 aa7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 C11orf72Q8NBR9 251 aa7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 SUN5Q8TC36 379 aa7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 SGK494Q96LW2 274 aa7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 PYGO2Q9BRQ0 406 aa7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 GSN-AS1Q9NRJ2 163 aa7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 KLF12Q9Y4X4 402 aa7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 DNAH6Q9C0G6 4158 aa7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 BIRC6Q9NR09 4857 aa7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 NACAE9PAV3 2078 aa7.2□□□□□ -1.26
GTF3C1-213ENST00000571886 TRAV8-1A0A0A6YYK1 113 aa7.19□□□□□ -1.26
GTF3C1-213ENST00000571886 BORCS7-ASMTA0A0B4J1R7 106 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms