RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 M0R2Z0 102 aa9.68□□□□□ -0.86
CCDC40-205ENST00000571028 SPRY2O43597 315 aa9.68□□□□□ -0.86
CCDC40-205ENST00000571028 IGKV2D-40P01614 121 aaPredicted RBP9.68□□□□□ -0.86
CCDC40-205ENST00000571028 SPINK13Q1W4C9 94 aa9.68□□□□□ -0.86
CCDC40-205ENST00000571028 TMEM167BQ9NRX6 74 aa9.68□□□□□ -0.86
CCDC40-205ENST00000571028 DNAH10Q8IVF4 4471 aa9.68□□□□□ -0.86
CCDC40-205ENST00000571028 IGHV3OR16-12A0A075B7B8 117 aa9.67□□□□□ -0.86
CCDC40-205ENST00000571028 SLC25A5P05141 298 aaKnown RBP9.67□□□□□ -0.86
CCDC40-205ENST00000571028 GIG44P09565 113 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-205ENST00000571028 H2AFB1P0C5Y9 115 aa9.67□□□□□ -0.86
CCDC40-205ENST00000571028 MED14OSP0DP75 135 aa9.67□□□□□ -0.86
CCDC40-205ENST00000571028 GNG5P63218 68 aa9.67□□□□□ -0.86
CCDC40-205ENST00000571028 ALKAL2Q6UX46 152 aa9.67□□□□□ -0.86
CCDC40-205ENST00000571028 PHLDA1Q8WV24 401 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-205ENST00000571028 MRPL53Q96EL3 112 aaKnown RBP9.67□□□□□ -0.86
CCDC40-205ENST00000571028 OTORQ9NRC9 128 aa9.67□□□□□ -0.86
CCDC40-205ENST00000571028 TRAV12-2A0A075B6T6 113 aa9.66□□□□□ -0.86
CCDC40-205ENST00000571028 SUMO1P63165 101 aaKnown RBP9.66□□□□□ -0.86
CCDC40-205ENST00000571028 DPPA3Q6W0C5 159 aa9.66□□□□□ -0.86
CCDC40-205ENST00000571028 Q6ZWC4 215 aa9.66□□□□□ -0.86
CCDC40-205ENST00000571028 LYPD1Q8N2G4 141 aa9.66□□□□□ -0.86
CCDC40-205ENST00000571028 RNF183Q96D59 192 aa9.66□□□□□ -0.86
CCDC40-205ENST00000571028 VGLL1Q99990 258 aa9.66□□□□□ -0.86
CCDC40-205ENST00000571028 TP53TG1Q9Y2A0 90 aa9.66□□□□□ -0.86
CCDC40-205ENST00000571028 SULT1A2P50226 295 aa9.65□□□□□ -0.86
CCDC40-205ENST00000571028 AMTNQ6UX39 209 aa9.65□□□□□ -0.86
CCDC40-205ENST00000571028 GOLT1AQ6ZVE7 132 aa9.65□□□□□ -0.86
CCDC40-205ENST00000571028 OR11H2Q8NH07 326 aa9.65□□□□□ -0.86
CCDC40-205ENST00000571028 RXFP4Q8TDU9 374 aa9.65□□□□□ -0.86
CCDC40-205ENST00000571028 RARRES2Q99969 163 aa9.65□□□□□ -0.86
CCDC40-205ENST00000571028 C1QTNF4Q9BXJ3 329 aa9.65□□□□□ -0.86
CCDC40-205ENST00000571028 AGPAT4-IT1Q9H0P7 198 aa9.65□□□□□ -0.86
CCDC40-205ENST00000571028 YTHDF2Q9Y5A9 579 aaKnown RBP9.65□□□□□ -0.86
CCDC40-205ENST00000571028 ZNF705EA8MWA4 302 aaPredicted RBP9.64□□□□□ -0.87
CCDC40-205ENST00000571028 DIRC3C9JPN6 131 aa9.64□□□□□ -0.87
CCDC40-205ENST00000571028 NPIPB6E9PJ23 425 aa9.64□□□□□ -0.87
CCDC40-205ENST00000571028 IFNA7P01567 189 aa9.64□□□□□ -0.87
CCDC40-205ENST00000571028 CT45A10P0DMU9 189 aa9.64□□□□□ -0.87
CCDC40-205ENST00000571028 RAB5CP51148 216 aa9.64□□□□□ -0.87
CCDC40-205ENST00000571028 CST9LP1Q5W188 147 aa9.64□□□□□ -0.87
CCDC40-205ENST00000571028 MBD3L1Q8WWY6 194 aa9.64□□□□□ -0.87
CCDC40-205ENST00000571028 SGK494Q96LW2 274 aa9.64□□□□□ -0.87
CCDC40-205ENST00000571028 GGTLC3B5MD39 225 aa9.63□□□□□ -0.87
CCDC40-205ENST00000571028 DEFB4AO15263 64 aa9.63□□□□□ -0.87
CCDC40-205ENST00000571028 PAGE4O60829 102 aa9.63□□□□□ -0.87
CCDC40-205ENST00000571028 TMEM78Q5T7P6 136 aa9.63□□□□□ -0.87
CCDC40-205ENST00000571028 LINC00336Q6ZUF6 198 aa9.63□□□□□ -0.87
CCDC40-205ENST00000571028 Q8TAT8 98 aa9.63□□□□□ -0.87
CCDC40-205ENST00000571028 SUN5Q8TC36 379 aa9.63□□□□□ -0.87
CCDC40-205ENST00000571028 CLUHP3Q96NS8 147 aa9.63□□□□□ -0.87
CCDC40-205ENST00000571028 TMEM208Q9BTX3 173 aa9.63□□□□□ -0.87
CCDC40-205ENST00000571028 FAM74A7A6NL05 159 aa9.62□□□□□ -0.87
CCDC40-205ENST00000571028 A8MTW9 85 aa9.62□□□□□ -0.87
CCDC40-205ENST00000571028 INSP01308 110 aa9.62□□□□□ -0.87
CCDC40-205ENST00000571028 TSPOP30536 169 aa9.62□□□□□ -0.87
CCDC40-205ENST00000571028 LEPP41159 167 aa9.62□□□□□ -0.87
CCDC40-205ENST00000571028 CCL20P78556 96 aa9.62□□□□□ -0.87
CCDC40-205ENST00000571028 KIR3DS1Q14943 382 aa9.62□□□□□ -0.87
CCDC40-205ENST00000571028 CSNK1G2-AS1Q8NCQ2 148 aa9.62□□□□□ -0.87
CCDC40-205ENST00000571028 LINC00477Q96M19 166 aa9.62□□□□□ -0.87
CCDC40-205ENST00000571028 GNG13Q9P2W3 67 aa9.62□□□□□ -0.87
CCDC40-205ENST00000571028 GOLT1BQ9Y3E0 138 aa9.62□□□□□ -0.87
CCDC40-205ENST00000571028 A0A1W2PRE2 83 aa9.61□□□□□ -0.87
CCDC40-205ENST00000571028 AMBPP02760 352 aa9.61□□□□□ -0.87
CCDC40-205ENST00000571028 CDKN1BP46527 198 aa9.61□□□□□ -0.87
CCDC40-205ENST00000571028 ATP5G3P48201 142 aa9.61□□□□□ -0.87
CCDC40-205ENST00000571028 C9orf47Q6ZRZ4 202 aa9.61□□□□□ -0.87
CCDC40-205ENST00000571028 C5orf17Q8NAS9 161 aa9.61□□□□□ -0.87
CCDC40-205ENST00000571028 IGF2BP2-AS1Q96M15 143 aa9.61□□□□□ -0.87
CCDC40-205ENST00000571028 EPDR1Q9UM22 224 aa9.61□□□□□ -0.87
CCDC40-205ENST00000571028 TRAV8-1A0A0A6YYK1 113 aa9.6□□□□□ -0.87
CCDC40-205ENST00000571028 TEX46H3BTG2 121 aa9.6□□□□□ -0.87
CCDC40-205ENST00000571028 CRXO43186 299 aaPredicted RBP9.6□□□□□ -0.87
CCDC40-205ENST00000571028 HBE1P02100 147 aa9.6□□□□□ -0.87
CCDC40-205ENST00000571028 TCRAP04437 139 aa9.6□□□□□ -0.87
CCDC40-205ENST00000571028 HTN1P15515 57 aa9.6□□□□□ -0.87
CCDC40-205ENST00000571028 RNASE4P34096 147 aaKnown RBP9.6□□□□□ -0.87
CCDC40-205ENST00000571028 ZNF138P52744 262 aa9.6□□□□□ -0.87
CCDC40-205ENST00000571028 C1orf158Q8N1D5 194 aa9.6□□□□□ -0.87
CCDC40-205ENST00000571028 LINC01587Q99440 93 aa9.6□□□□□ -0.87
CCDC40-205ENST00000571028 ZNF492Q9P255 531 aa9.6□□□□□ -0.87
CCDC40-205ENST00000571028 TRAV12-3A0A0B4J271 114 aa9.59□□□□□ -0.87
CCDC40-205ENST00000571028 TRAV34A0A0B4J273 112 aa9.59□□□□□ -0.87
CCDC40-205ENST00000571028 RBAKDNA6NC62 111 aa9.59□□□□□ -0.87
CCDC40-205ENST00000571028 ZNF705GA8MUZ8 300 aaPredicted RBP9.59□□□□□ -0.87
CCDC40-205ENST00000571028 K7EQM0 130 aa9.59□□□□□ -0.87
CCDC40-205ENST00000571028 PRM2P04554 102 aa9.59□□□□□ -0.87
CCDC40-205ENST00000571028 GPX1P07203 203 aa9.59□□□□□ -0.87
CCDC40-205ENST00000571028 EMP1P54849 157 aa9.59□□□□□ -0.87
CCDC40-205ENST00000571028 TCTAP57738 103 aa9.59□□□□□ -0.87
CCDC40-205ENST00000571028 GFI1BQ5VTD9 330 aa9.59□□□□□ -0.87
CCDC40-205ENST00000571028 C2CD4CQ8TF44 421 aa9.59□□□□□ -0.87
CCDC40-205ENST00000571028 LINC00479Q96M42 142 aa9.59□□□□□ -0.87
CCDC40-205ENST00000571028 X6R8D5 127 aa9.59□□□□□ -0.87
CCDC40-205ENST00000571028 IGHV4-28A0A0C4DH34 117 aa9.58□□□□□ -0.88
CCDC40-205ENST00000571028 F6UZH7 168 aa9.58□□□□□ -0.88
CCDC40-205ENST00000571028 PEX7O00628 323 aa9.58□□□□□ -0.88
CCDC40-205ENST00000571028 RBMY1A1P0DJD3 496 aaKnown RBP9.58□□□□□ -0.88
CCDC40-205ENST00000571028 RBMY1CP0DJD4 496 aa9.58□□□□□ -0.88
CCDC40-205ENST00000571028 BLOC1S1P78537 153 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms