RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 AMMECR1Q9Y4X0 333 aaPredicted RBP2.75□□□□□ -1.97
SMG6-208ENST00000570874 NBASA2RRP1 2371 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 PIEZO2Q9H5I5 2752 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 CACNA1BQ00975 2339 aa2.75□□□□□ -1.97
SMG6-208ENST00000570874 RP1L1Q8IWN7 2480 aaPredicted RBP2.74□□□□□ -1.97
SMG6-208ENST00000570874 TRAV8-3A0A0A6YYJ7 113 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 IGHV4-28A0A0C4DH34 117 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 A0A1W2PPR1 153 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 C9orf118A6NHY6 69 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 IFITM10A6NMD0 228 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 DEFB108AA8MXU0 73 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 SRRM5B3KS81 715 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 E9PLD3 99 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 LYNX1G3V0Z9 82 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 LY6LH3BQJ8 138 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 ISLRO14498 428 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 ZNF737O75373 536 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 LY6HO94772 140 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 PPYP01298 95 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 IGHV3-7P01780 117 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 GYPAP02724 150 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 PRH1P02810 166 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 LYNX1P0DP58 116 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 NFYBP25208 207 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 CRYBB3P26998 211 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 PLA2G5P39877 138 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 OPRK1P41145 380 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 MFAP2P55001 183 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 LINC00205P59089 165 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 LMO4P61968 165 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 RPS23P62266 143 aaKnown RBP2.74□□□□□ -1.97
SMG6-208ENST00000570874 PRR3P79522 188 aaKnown RBP2.74□□□□□ -1.97
SMG6-208ENST00000570874 CCL8P80075 99 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 SERF2P84101 59 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 TFF3Q07654 80 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 KLRD1Q13241 179 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 KLF17Q5JT82 389 aaPredicted RBP2.74□□□□□ -1.97
SMG6-208ENST00000570874 LINC00242Q5T6M2 205 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 RPL7L1Q6DKI1 246 aaKnown RBP2.74□□□□□ -1.97
SMG6-208ENST00000570874 LCN12Q6JVE5 192 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 HEPN1Q6WQI6 88 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 ZNF497Q6ZNH5 498 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 ZNF818PQ6ZRF7 136 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 ATP5L2Q7Z4Y8 100 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 TRPT1Q86TN4 253 aaKnown RBP2.74□□□□□ -1.97
SMG6-208ENST00000570874 LINC00596Q86U02 117 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 FAM216BQ8N7L0 139 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 STPG4Q8N801 248 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 ZNRF1Q8ND25 227 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 DEFB108BQ8NET1 73 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 NUP37Q8NFH4 326 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 OR51H1Q8NH63 302 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 TVP23CQ96ET8 276 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 PGLYRP4Q96LB8 373 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 C17orf77Q96MU5 243 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 NAA38Q9BRA0 125 aaKnown RBP2.74□□□□□ -1.97
SMG6-208ENST00000570874 NAA60Q9H7X0 242 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 LINC00527Q9UJ94 153 aa2.74□□□□□ -1.97
SMG6-208ENST00000570874 TRBV24-1A0A075B6N3 115 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 TRBV6-6A0A0A6YYG2 114 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 A0A0G2JRQ6 117 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 TMEM30CPA0ZSE6 113 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 IZUMO1RA6ND01 250 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 LINC00473A8K010 186 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 ZNF705GA8MUZ8 300 aaPredicted RBP2.73□□□□□ -1.97
SMG6-208ENST00000570874 C12orf77C9JDV5 145 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 K7N7A8 449 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 PITX3O75364 302 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 PGLYRP1O75594 196 aaPredicted RBP2.73□□□□□ -1.97
SMG6-208ENST00000570874 LHBP01229 141 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 IGLV2-14P01704 120 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 VDAC1P21796 283 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 FOXA3P55318 350 aaPredicted RBP2.73□□□□□ -1.97
SMG6-208ENST00000570874 TMEM258P61165 79 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 PRB3Q04118 309 aaPredicted RBP2.73□□□□□ -1.97
SMG6-208ENST00000570874 AKR1C1Q04828 323 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 TMEM183BQ1AE95 376 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 C17orf58Q2M2W7 97 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 FBXL19-AS1Q494R0 122 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 C11orf71Q6IPW1 123 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 UFSP1Q6NVU6 142 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 LYPD2Q6UXB3 125 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 LYZL2Q7Z4W2 148 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 Q8IYB0 196 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 OSR1Q8TAX0 266 aaPredicted RBP2.73□□□□□ -1.97
SMG6-208ENST00000570874 RNASE6Q93091 150 aaKnown RBP2.73□□□□□ -1.97
SMG6-208ENST00000570874 LEAP2Q969E1 77 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 MBD6Q96DN6 1003 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 KCNS1Q96KK3 526 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 BBC3Q96PG8 261 aaPredicted RBP2.73□□□□□ -1.97
SMG6-208ENST00000570874 GAFA1Q96PS6 74 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 LINC01587Q99440 93 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 HIST1H4GQ99525 98 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 CCL13Q99616 98 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 TXNDC17Q9BRA2 123 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 SCRT1Q9BWW7 348 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 ZNRD1Q9P1U0 126 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 CTSZQ9UBR2 303 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 UQCR10Q9UDW1 63 aa2.73□□□□□ -1.97
SMG6-208ENST00000570874 PYGO1Q9Y3Y4 419 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms