RNA–Protein interactions for RNA: ENST00000570798.5

LITAF-204, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-204ENST00000570798 IGKV2-40A0A087WW87 121 aaPredicted RBP12.81□□□□□ -0.36
LITAF-204ENST00000570798 LYRM9A8MSI8 78 aa12.81□□□□□ -0.36
LITAF-204ENST00000570798 KLLNB2CW77 178 aa12.81□□□□□ -0.36
LITAF-204ENST00000570798 IGKV2D-40P01614 121 aaPredicted RBP12.81□□□□□ -0.36
LITAF-204ENST00000570798 SLC25A5P05141 298 aaKnown RBP12.81□□□□□ -0.36
LITAF-204ENST00000570798 CRISP2P16562 243 aa12.81□□□□□ -0.36
LITAF-204ENST00000570798 SERF2P84101 59 aa12.81□□□□□ -0.36
LITAF-204ENST00000570798 PQLC2Q6ZP29 291 aa12.81□□□□□ -0.36
LITAF-204ENST00000570798 ZNF493Q6ZR52 646 aa12.81□□□□□ -0.36
LITAF-204ENST00000570798 C16orf74Q96GX8 76 aa12.81□□□□□ -0.36
LITAF-204ENST00000570798 VGLL1Q99990 258 aa12.81□□□□□ -0.36
LITAF-204ENST00000570798 Q9H3A6 140 aa12.81□□□□□ -0.36
LITAF-204ENST00000570798 J3KRW8 73 aa12.8□□□□□ -0.36
LITAF-204ENST00000570798 RNASE8Q8TDE3 154 aaKnown RBP12.8□□□□□ -0.36
LITAF-204ENST00000570798 TMEM263Q8WUH6 116 aaKnown RBP12.8□□□□□ -0.36
LITAF-204ENST00000570798 ZNF492Q9P255 531 aa12.8□□□□□ -0.36
LITAF-204ENST00000570798 TRAV12-3A0A0B4J271 114 aa12.79□□□□□ -0.36
LITAF-204ENST00000570798 RBAKDNA6NC62 111 aa12.79□□□□□ -0.36
LITAF-204ENST00000570798 NMBP08949 121 aa12.79□□□□□ -0.36
LITAF-204ENST00000570798 HTN1P15515 57 aa12.79□□□□□ -0.36
LITAF-204ENST00000570798 DAD1P61803 113 aa12.79□□□□□ -0.36
LITAF-204ENST00000570798 RPL7L1Q6DKI1 246 aaKnown RBP12.79□□□□□ -0.36
LITAF-204ENST00000570798 C7orf71A4D174 169 aa12.78□□□□□ -0.36
LITAF-204ENST00000570798 ZNF324O75467 553 aaPredicted RBP12.78□□□□□ -0.36
LITAF-204ENST00000570798 STAG3L2P0CL84 134 aa12.78□□□□□ -0.36
LITAF-204ENST00000570798 STAG3L3P0CL85 134 aa12.78□□□□□ -0.36
LITAF-204ENST00000570798 CSN1S1P47710 185 aa12.78□□□□□ -0.36
LITAF-204ENST00000570798 CDC34P49427 236 aaPredicted RBP12.78□□□□□ -0.36
LITAF-204ENST00000570798 CD300CQ08708 224 aa12.78□□□□□ -0.36
LITAF-204ENST00000570798 TMEM78Q5T7P6 136 aa12.78□□□□□ -0.36
LITAF-204ENST00000570798 ZFAND2AQ8N6M9 145 aa12.78□□□□□ -0.36
LITAF-204ENST00000570798 PYGO2Q9BRQ0 406 aa12.78□□□□□ -0.36
LITAF-204ENST00000570798 SH3BGRL3Q9H299 93 aa12.78□□□□□ -0.36
LITAF-204ENST00000570798 BORCS7-ASMTA0A0B4J1R7 106 aa12.77□□□□□ -0.37
LITAF-204ENST00000570798 TRBV7-9A0A0J9YWB2 115 aa12.77□□□□□ -0.37
LITAF-204ENST00000570798 DIRC3C9JPN6 131 aa12.77□□□□□ -0.37
LITAF-204ENST00000570798 HMGB3O15347 200 aaKnown RBP12.77□□□□□ -0.37
LITAF-204ENST00000570798 MBP02144 154 aa12.77□□□□□ -0.37
LITAF-204ENST00000570798 RXFP4Q8TDU9 374 aa12.77□□□□□ -0.37
LITAF-204ENST00000570798 RAB24Q969Q5 203 aa12.77□□□□□ -0.37
LITAF-204ENST00000570798 GNPNAT1Q96EK6 184 aaPredicted RBP12.77□□□□□ -0.37
LITAF-204ENST00000570798 FAM210BQ96KR6 192 aa12.77□□□□□ -0.37
LITAF-204ENST00000570798 NDUFAF3Q9BU61 184 aa12.77□□□□□ -0.37
LITAF-204ENST00000570798 OTORQ9NRC9 128 aa12.77□□□□□ -0.37
LITAF-204ENST00000570798 TIMM8BQ9Y5J9 83 aaPredicted RBP12.77□□□□□ -0.37
LITAF-204ENST00000570798 VPS13DQ5THJ4 4388 aa12.76□□□□□ -0.37
LITAF-204ENST00000570798 PGPA6NDG6 321 aa12.76□□□□□ -0.37
LITAF-204ENST00000570798 ARL14EPLP0DKL9 152 aa12.76□□□□□ -0.37
LITAF-204ENST00000570798 ZNF138P52744 262 aa12.76□□□□□ -0.37
LITAF-204ENST00000570798 BTN1A1Q13410 526 aa12.76□□□□□ -0.37
LITAF-204ENST00000570798 CCDC28AQ8IWP9 274 aa12.76□□□□□ -0.37
LITAF-204ENST00000570798 SUN5Q8TC36 379 aa12.76□□□□□ -0.37
LITAF-204ENST00000570798 LINC00467Q9BRT7 94 aa12.76□□□□□ -0.37
LITAF-204ENST00000570798 SMLR1H3BR10 107 aa12.75□□□□□ -0.37
LITAF-204ENST00000570798 TAAR5O14804 337 aa12.75□□□□□ -0.37
LITAF-204ENST00000570798 ARPC5O15511 151 aa12.75□□□□□ -0.37
LITAF-204ENST00000570798 GPX1P07203 203 aa12.75□□□□□ -0.37
LITAF-204ENST00000570798 DEFB130BP0DP73 79 aa12.75□□□□□ -0.37
LITAF-204ENST00000570798 DEFB130AP0DP74 79 aa12.75□□□□□ -0.37
LITAF-204ENST00000570798 PRR9Q5T870 116 aa12.75□□□□□ -0.37
LITAF-204ENST00000570798 ARL6IP6Q8N6S5 226 aa12.75□□□□□ -0.37
LITAF-204ENST00000570798 NOP10Q9NPE3 64 aaKnown RBP12.75□□□□□ -0.37
LITAF-204ENST00000570798 KMT2AQ03164 3969 aa12.74□□□□□ -0.37
LITAF-204ENST00000570798 HTN3P15516 51 aa12.74□□□□□ -0.37
LITAF-204ENST00000570798 RNASE4P34096 147 aaKnown RBP12.74□□□□□ -0.37
LITAF-204ENST00000570798 FAM74A1Q5RGS3 127 aa12.74□□□□□ -0.37
LITAF-204ENST00000570798 LINC00612Q8N6U2 182 aa12.74□□□□□ -0.37
LITAF-204ENST00000570798 Q8TAT8 98 aa12.74□□□□□ -0.37
LITAF-204ENST00000570798 CYTL1Q9NRR1 136 aa12.74□□□□□ -0.37
LITAF-204ENST00000570798 CBY3A6NI87 242 aa12.73□□□□□ -0.37
LITAF-204ENST00000570798 GCHFRP30047 84 aa12.73□□□□□ -0.37
LITAF-204ENST00000570798 SSX7Q7RTT5 188 aa12.73□□□□□ -0.37
LITAF-204ENST00000570798 TMED6Q8WW62 240 aa12.73□□□□□ -0.37
LITAF-204ENST00000570798 HYLS1Q96M11 299 aa12.73□□□□□ -0.37
LITAF-204ENST00000570798 ACTR3CQ9C0K3 210 aaPredicted RBP12.73□□□□□ -0.37
LITAF-204ENST00000570798 LENEPQ9Y5L5 61 aa12.73□□□□□ -0.37
LITAF-204ENST00000570798 ANXA2RQ3ZCQ2 193 aa12.72□□□□□ -0.37
LITAF-204ENST00000570798 Q6ZQT7 251 aa12.72□□□□□ -0.37
LITAF-204ENST00000570798 C11orf72Q8NBR9 251 aa12.72□□□□□ -0.37
LITAF-204ENST00000570798 CMTM2Q8TAZ6 248 aa12.72□□□□□ -0.37
LITAF-204ENST00000570798 CXorf1O96002 111 aa12.71□□□□□ -0.37
LITAF-204ENST00000570798 ATP5G1P05496 136 aa12.71□□□□□ -0.37
LITAF-204ENST00000570798 ATP5G3P48201 142 aa12.71□□□□□ -0.37
LITAF-204ENST00000570798 DAZ2Q13117 558 aaKnown RBP12.71□□□□□ -0.37
LITAF-204ENST00000570798 ZNF726P1Q15940 193 aa12.71□□□□□ -0.37
LITAF-204ENST00000570798 EIF4E3Q8N5X7 224 aaKnown RBP12.71□□□□□ -0.37
LITAF-204ENST00000570798 OR11H4Q8NGC9 324 aa12.71□□□□□ -0.37
LITAF-204ENST00000570798 ST6GAL2Q96JF0 529 aa12.71□□□□□ -0.37
LITAF-204ENST00000570798 DNAH6Q9C0G6 4158 aa12.7□□□□□ -0.38
LITAF-204ENST00000570798 HMSDA8MTL9 139 aa12.7□□□□□ -0.38
LITAF-204ENST00000570798 SNURFLB1AK76 121 aa12.7□□□□□ -0.38
LITAF-204ENST00000570798 ZNF345Q14585 488 aa12.7□□□□□ -0.38
LITAF-204ENST00000570798 TMEM88Q6PEY1 159 aa12.7□□□□□ -0.38
LITAF-204ENST00000570798 KCNRGQ8N5I3 272 aa12.7□□□□□ -0.38
LITAF-204ENST00000570798 ZNF680Q8NEM1 530 aa12.7□□□□□ -0.38
LITAF-204ENST00000570798 CTXND1A0A1B0GTU2 59 aa12.69□□□□□ -0.38
LITAF-204ENST00000570798 P0DMU3 169 aa12.69□□□□□ -0.38
LITAF-204ENST00000570798 FAM231AP0DMU4 169 aa12.69□□□□□ -0.38
LITAF-204ENST00000570798 FAM231CP0DMU5 169 aa12.69□□□□□ -0.38
LITAF-204ENST00000570798 GOLT1AQ6ZVE7 132 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms