RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 TNFRSF14Q92956 283 aa12.03□□□□□ -0.48
USP43-202ENST00000570475 CST9LQ9H4G1 147 aa12.03□□□□□ -0.48
USP43-202ENST00000570475 BMI1P35226 326 aa12.02□□□□□ -0.48
USP43-202ENST00000570475 FAM104BQ5XKR9 115 aa12.02□□□□□ -0.48
USP43-202ENST00000570475 GTSCR1Q86UQ5 136 aa12.02□□□□□ -0.48
USP43-202ENST00000570475 TRAV30A0A087WSZ9 112 aa12.02□□□□□ -0.49
USP43-202ENST00000570475 TRAV26-2A0A0B4J265 109 aa12.02□□□□□ -0.49
USP43-202ENST00000570475 IGHV2-70DA0A0C4DH43 119 aa12.02□□□□□ -0.49
USP43-202ENST00000570475 SAPCD1Q5SSQ6 148 aa12.02□□□□□ -0.49
USP43-202ENST00000570475 TMEM219Q86XT9 240 aa12.02□□□□□ -0.49
USP43-202ENST00000570475 SMIM12Q96EX1 92 aa12.02□□□□□ -0.49
USP43-202ENST00000570475 G3V318 75 aa12.02□□□□□ -0.49
USP43-202ENST00000570475 SCRT2Q9NQ03 307 aa12.02□□□□□ -0.49
USP43-202ENST00000570475 ARL3P36405 182 aa12.01□□□□□ -0.49
USP43-202ENST00000570475 GLMPQ8WWB7 406 aa12.01□□□□□ -0.49
USP43-202ENST00000570475 VMO1Q7Z5L0 202 aa12.01□□□□□ -0.49
USP43-202ENST00000570475 WFDC12Q8WWY7 111 aa12.01□□□□□ -0.49
USP43-202ENST00000570475 PRR25Q96S07 402 aa12.01□□□□□ -0.49
USP43-202ENST00000570475 C2CD3Q4AC94 2353 aa12.01□□□□□ -0.49
USP43-202ENST00000570475 K7EP13 123 aa12□□□□□ -0.49
USP43-202ENST00000570475 M0R381 172 aa12□□□□□ -0.49
USP43-202ENST00000570475 ZNF80P51504 273 aaPredicted RBP12□□□□□ -0.49
USP43-202ENST00000570475 TMEM14CQ9P0S9 112 aa12□□□□□ -0.49
USP43-202ENST00000570475 SVEP1Q4LDE5 3571 aa12□□□□□ -0.49
USP43-202ENST00000570475 GAS8-AS1O95177 125 aa12□□□□□ -0.49
USP43-202ENST00000570475 SFTA2Q6UW10 78 aa12□□□□□ -0.49
USP43-202ENST00000570475 GTF2H5Q6ZYL4 71 aa12□□□□□ -0.49
USP43-202ENST00000570475 MEGF9Q9H1U4 602 aa12□□□□□ -0.49
USP43-202ENST00000570475 MS4A6AQ9H2W1 248 aa12□□□□□ -0.49
USP43-202ENST00000570475 SETD2Q9BYW2 2564 aaPredicted RBP12□□□□□ -0.49
USP43-202ENST00000570475 PRAC2D3DTV9 90 aa12□□□□□ -0.49
USP43-202ENST00000570475 K7ERU9 68 aa12□□□□□ -0.49
USP43-202ENST00000570475 COX8AP10176 69 aa12□□□□□ -0.49
USP43-202ENST00000570475 COL27A1Q8IZC6 1860 aaPredicted RBP12□□□□□ -0.49
USP43-202ENST00000570475 GOSR1O95249 250 aa11.99□□□□□ -0.49
USP43-202ENST00000570475 KIR3DS1Q14943 382 aa11.99□□□□□ -0.49
USP43-202ENST00000570475 TMEM78Q5T7P6 136 aa11.99□□□□□ -0.49
USP43-202ENST00000570475 IL17RELQ6ZVW7 336 aa11.99□□□□□ -0.49
USP43-202ENST00000570475 DEFB125Q8N687 156 aa11.99□□□□□ -0.49
USP43-202ENST00000570475 FABP5P3A8MUU1 101 aa11.99□□□□□ -0.49
USP43-202ENST00000570475 SAP30O75446 220 aa11.99□□□□□ -0.49
USP43-202ENST00000570475 MGPP08493 103 aa11.99□□□□□ -0.49
USP43-202ENST00000570475 PLP1P60201 277 aa11.99□□□□□ -0.49
USP43-202ENST00000570475 PTPN13Q12923 2485 aa11.99□□□□□ -0.49
USP43-202ENST00000570475 NDUFA3O95167 84 aa11.99□□□□□ -0.49
USP43-202ENST00000570475 OCIAD2Q56VL3 154 aa11.99□□□□□ -0.49
USP43-202ENST00000570475 Q6AWC8 147 aa11.99□□□□□ -0.49
USP43-202ENST00000570475 LCNL1Q6ZST4 164 aa11.99□□□□□ -0.49
USP43-202ENST00000570475 PPP1R14DQ9NXH3 145 aa11.99□□□□□ -0.49
USP43-202ENST00000570475 CD5LO43866 347 aa11.98□□□□□ -0.49
USP43-202ENST00000570475 LINC01545Q5VT33 79 aa11.98□□□□□ -0.49
USP43-202ENST00000570475 CRYGBP07316 175 aa11.98□□□□□ -0.49
USP43-202ENST00000570475 CCDC144NLQ6NUI1 221 aa11.98□□□□□ -0.49
USP43-202ENST00000570475 DYNAPQ8N1N2 210 aa11.98□□□□□ -0.49
USP43-202ENST00000570475 C16orf92Q96LL3 132 aa11.98□□□□□ -0.49
USP43-202ENST00000570475 NHP2Q9NX24 153 aaKnown RBP11.98□□□□□ -0.49
USP43-202ENST00000570475 IGHV3-11P01762 117 aa11.98□□□□□ -0.49
USP43-202ENST00000570475 LY6EQ16553 131 aa11.98□□□□□ -0.49
USP43-202ENST00000570475 MTURNQ8N3F0 131 aa11.98□□□□□ -0.49
USP43-202ENST00000570475 SPCS1Q9Y6A9 102 aa11.98□□□□□ -0.49
USP43-202ENST00000570475 TLN2Q9Y4G6 2542 aa11.98□□□□□ -0.49
USP43-202ENST00000570475 TMEM158Q8WZ71 300 aa11.97□□□□□ -0.49
USP43-202ENST00000570475 FANCD2OSQ96PS1 177 aa11.97□□□□□ -0.49
USP43-202ENST00000570475 DEFB1P60022 68 aa11.97□□□□□ -0.49
USP43-202ENST00000570475 C8orf31Q8N9H6 132 aa11.97□□□□□ -0.49
USP43-202ENST00000570475 A0A0G2JLM5 398 aa11.97□□□□□ -0.49
USP43-202ENST00000570475 K7ERJ3 54 aa11.97□□□□□ -0.49
USP43-202ENST00000570475 SRD5A1P18405 259 aa11.97□□□□□ -0.49
USP43-202ENST00000570475 ZNF562Q6V9R5 426 aa11.97□□□□□ -0.49
USP43-202ENST00000570475 VKORC1Q9BQB6 163 aa11.97□□□□□ -0.49
USP43-202ENST00000570475 MYO9AB2RTY4 2548 aa11.96□□□□□ -0.49
USP43-202ENST00000570475 RBX1P62877 108 aa11.96□□□□□ -0.49
USP43-202ENST00000570475 MYOZ3Q8TDC0 251 aa11.96□□□□□ -0.49
USP43-202ENST00000570475 H3BVH4 76 aa11.96□□□□□ -0.5
USP43-202ENST00000570475 OR2K2Q8NGT1 345 aa11.96□□□□□ -0.5
USP43-202ENST00000570475 NPIPB6E9PJ23 425 aa11.95□□□□□ -0.5
USP43-202ENST00000570475 ZC2HC1BQ5TFG8 222 aa11.95□□□□□ -0.5
USP43-202ENST00000570475 A0A1B0GW15 77 aa11.95□□□□□ -0.5
USP43-202ENST00000570475 CDSNQ15517 529 aa11.95□□□□□ -0.5
USP43-202ENST00000570475 LYPD1Q8N2G4 141 aa11.95□□□□□ -0.5
USP43-202ENST00000570475 TNFRSF13BO14836 293 aaPredicted RBP11.95□□□□□ -0.5
USP43-202ENST00000570475 SMAD7O15105 426 aaKnown RBP11.95□□□□□ -0.5
USP43-202ENST00000570475 TNFRSF6BO95407 300 aa11.95□□□□□ -0.5
USP43-202ENST00000570475 CTSGP08311 255 aa11.94□□□□□ -0.5
USP43-202ENST00000570475 ATP6V0E1O15342 81 aa11.94□□□□□ -0.5
USP43-202ENST00000570475 FABP2P12104 132 aa11.94□□□□□ -0.5
USP43-202ENST00000570475 COL25A1Q9BXS0 654 aaPredicted RBP11.94□□□□□ -0.5
USP43-202ENST00000570475 CENPEQ02224 2701 aa11.94□□□□□ -0.5
USP43-202ENST00000570475 TRAV40A0A0B4J280 105 aa11.94□□□□□ -0.5
USP43-202ENST00000570475 CRXO43186 299 aaPredicted RBP11.94□□□□□ -0.5
USP43-202ENST00000570475 Q6ZQT7 251 aa11.94□□□□□ -0.5
USP43-202ENST00000570475 ARL6IP6Q8N6S5 226 aa11.94□□□□□ -0.5
USP43-202ENST00000570475 POLQO75417 2590 aa11.93□□□□□ -0.5
USP43-202ENST00000570475 LINC01548A6NM66 108 aa11.93□□□□□ -0.5
USP43-202ENST00000570475 PRTN3P24158 256 aa11.93□□□□□ -0.5
USP43-202ENST00000570475 EFNA4P52798 201 aa11.93□□□□□ -0.5
USP43-202ENST00000570475 METTL26Q96S19 204 aa11.93□□□□□ -0.5
USP43-202ENST00000570475 F5H697 171 aa11.93□□□□□ -0.5
USP43-202ENST00000570475 BRD3OSQ6XYD6 125 aa11.93□□□□□ -0.5
USP43-202ENST00000570475 USP9XQ93008 2570 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms