RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 KLF12Q9Y4X4 402 aa11.46□□□□□ -0.57
HERPUD1-219ENST00000570273 A0A0J9YX75 114 aa11.45□□□□□ -0.58
HERPUD1-219ENST00000570273 FBLL1A6NHQ2 334 aaKnown RBP11.45□□□□□ -0.58
HERPUD1-219ENST00000570273 IGLV2-11P01706 119 aa11.45□□□□□ -0.58
HERPUD1-219ENST00000570273 ADCYAP1P18509 176 aa11.45□□□□□ -0.58
HERPUD1-219ENST00000570273 TAS2R60P59551 318 aa11.45□□□□□ -0.58
HERPUD1-219ENST00000570273 ZNF124Q15973 351 aa11.45□□□□□ -0.58
HERPUD1-219ENST00000570273 FAM74A3Q4VXF1 159 aa11.45□□□□□ -0.58
HERPUD1-219ENST00000570273 CENPWQ5EE01 88 aa11.45□□□□□ -0.58
HERPUD1-219ENST00000570273 ACTL10Q5JWF8 245 aa11.45□□□□□ -0.58
HERPUD1-219ENST00000570273 Q8TAT8 98 aa11.45□□□□□ -0.58
HERPUD1-219ENST00000570273 CMYA5Q8N3K9 4069 aa11.45□□□□□ -0.58
HERPUD1-219ENST00000570273 DUSP14O95147 198 aaKnown RBP11.44□□□□□ -0.58
HERPUD1-219ENST00000570273 GNG4P50150 75 aa11.44□□□□□ -0.58
HERPUD1-219ENST00000570273 C9orf47Q6ZRZ4 202 aa11.44□□□□□ -0.58
HERPUD1-219ENST00000570273 IGF2BP2-AS1Q96M15 143 aa11.44□□□□□ -0.58
HERPUD1-219ENST00000570273 FAM110AQ9BQ89 295 aa11.44□□□□□ -0.58
HERPUD1-219ENST00000570273 AGPAT4-IT1Q9H0P7 198 aa11.44□□□□□ -0.58
HERPUD1-219ENST00000570273 WFDC10AQ9H1F0 79 aa11.44□□□□□ -0.58
HERPUD1-219ENST00000570273 TRBV6-1A0A0K0K1D8 114 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 C9JCJ5 164 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 G3V4G9 280 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 HLA-DRB4P13762 266 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 ZNF138P52744 262 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 BAGE2Q86Y30 109 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 OR4B1Q8NGF8 309 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 ASCL2Q99929 193 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 NIPSNAP3BQ9BS92 247 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 NDFIP1Q9BT67 221 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 SEC11CQ9BY50 192 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 C19orf73Q9NVV2 129 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 HLA-DRB4X5D2U9 266 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 TRBV20OR9-2A0A075B6H5 130 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 KRBOX1C9JBD0 128 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 LTAP01374 205 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 IGKV3-20P01619 116 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 SAMD5Q5TGI4 173 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 LINC00477Q96M19 166 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 PRR25Q96S07 402 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 PPP1R14DQ9NXH3 145 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 ZMAT5Q9UDW3 170 aaKnown RBP11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 NAT8Q9UHE5 227 aa11.43□□□□□ -0.58
HERPUD1-219ENST00000570273 ATP6V1G1O75348 118 aa11.42□□□□□ -0.58
HERPUD1-219ENST00000570273 CT45A10P0DMU9 189 aa11.42□□□□□ -0.58
HERPUD1-219ENST00000570273 STHQ8IWL8 128 aa11.42□□□□□ -0.58
HERPUD1-219ENST00000570273 NHLRC2Q8NBF2 726 aa11.42□□□□□ -0.58
HERPUD1-219ENST00000570273 ZNF492Q9P255 531 aa11.42□□□□□ -0.58
HERPUD1-219ENST00000570273 FBN3Q75N90 2809 aa11.42□□□□□ -0.58
HERPUD1-219ENST00000570273 PGPEP1LA6NFU8 196 aa11.41□□□□□ -0.58
HERPUD1-219ENST00000570273 H3BMM0 161 aa11.41□□□□□ -0.58
HERPUD1-219ENST00000570273 KRTAP10-11P60412 298 aa11.41□□□□□ -0.58
HERPUD1-219ENST00000570273 EGFEM1PQ0D2K5 195 aa11.41□□□□□ -0.58
HERPUD1-219ENST00000570273 TMEM241Q24JQ0 296 aa11.41□□□□□ -0.58
HERPUD1-219ENST00000570273 DEFB125Q8N687 156 aa11.41□□□□□ -0.58
HERPUD1-219ENST00000570273 ZFP30Q9Y2G7 519 aa11.41□□□□□ -0.58
HERPUD1-219ENST00000570273 CARHSP1Q9Y2V2 147 aaKnown RBP11.41□□□□□ -0.58
HERPUD1-219ENST00000570273 MGAM2Q2M2H8 2515 aa11.4□□□□□ -0.58
HERPUD1-219ENST00000570273 NBEAL1Q6ZS30 2694 aa11.4□□□□□ -0.58
HERPUD1-219ENST00000570273 MGST1P10620 155 aaKnown RBP11.4□□□□□ -0.58
HERPUD1-219ENST00000570273 ADIRFQ15847 76 aa11.4□□□□□ -0.58
HERPUD1-219ENST00000570273 SAPCD1Q5SSQ6 148 aa11.4□□□□□ -0.58
HERPUD1-219ENST00000570273 TVP23CQ96ET8 276 aa11.4□□□□□ -0.58
HERPUD1-219ENST00000570273 AURKAIP1Q9NWT8 199 aaPredicted RBP11.4□□□□□ -0.58
HERPUD1-219ENST00000570273 SORL1Q92673 2214 aa11.39□□□□□ -0.59
HERPUD1-219ENST00000570273 LEPP41159 167 aa11.39□□□□□ -0.59
HERPUD1-219ENST00000570273 C10orf91Q5T1B1 145 aa11.39□□□□□ -0.59
HERPUD1-219ENST00000570273 TMEM183AQ8IXX5 376 aa11.39□□□□□ -0.59
HERPUD1-219ENST00000570273 SMIM12Q96EX1 92 aa11.39□□□□□ -0.59
HERPUD1-219ENST00000570273 C8orf49Q96NF6 230 aa11.39□□□□□ -0.59
HERPUD1-219ENST00000570273 ODF3Q96PU9 254 aa11.39□□□□□ -0.59
HERPUD1-219ENST00000570273 SDF2L1Q9HCN8 221 aa11.39□□□□□ -0.59
HERPUD1-219ENST00000570273 LENEPQ9Y5L5 61 aa11.39□□□□□ -0.59
HERPUD1-219ENST00000570273 LY96Q9Y6Y9 160 aa11.39□□□□□ -0.59
HERPUD1-219ENST00000570273 RBMY1BA6NDE4 496 aaKnown RBP11.38□□□□□ -0.59
HERPUD1-219ENST00000570273 RBMY1EA6NEQ0 496 aaKnown RBP11.38□□□□□ -0.59
HERPUD1-219ENST00000570273 A8MTW9 85 aa11.38□□□□□ -0.59
HERPUD1-219ENST00000570273 J3KRW8 73 aa11.38□□□□□ -0.59
HERPUD1-219ENST00000570273 IGLV2-8P01709 118 aa11.38□□□□□ -0.59
HERPUD1-219ENST00000570273 APOC3P02656 99 aa11.38□□□□□ -0.59
HERPUD1-219ENST00000570273 RBMY1DP0C7P1 496 aaKnown RBP11.38□□□□□ -0.59
HERPUD1-219ENST00000570273 RPL23P62829 140 aaKnown RBP11.38□□□□□ -0.59
HERPUD1-219ENST00000570273 TRPT1Q86TN4 253 aaKnown RBP11.38□□□□□ -0.59
HERPUD1-219ENST00000570273 LINC01551Q86U37 167 aa11.38□□□□□ -0.59
HERPUD1-219ENST00000570273 OCC1Q8TAD7 63 aa11.38□□□□□ -0.59
HERPUD1-219ENST00000570273 SRD5A3Q9H8P0 318 aa11.38□□□□□ -0.59
HERPUD1-219ENST00000570273 TRBV7-9A0A0J9YWB2 115 aa11.37□□□□□ -0.59
HERPUD1-219ENST00000570273 RPL35AP18077 110 aaKnown RBP11.37□□□□□ -0.59
HERPUD1-219ENST00000570273 TSPOP30536 169 aa11.37□□□□□ -0.59
HERPUD1-219ENST00000570273 SMUG1Q53HV7 270 aa11.37□□□□□ -0.59
HERPUD1-219ENST00000570273 PRR27Q6MZM9 219 aa11.37□□□□□ -0.59
HERPUD1-219ENST00000570273 AMTNQ6UX39 209 aa11.37□□□□□ -0.59
HERPUD1-219ENST00000570273 Q8N1Y9 231 aa11.37□□□□□ -0.59
HERPUD1-219ENST00000570273 ZC2HC1AQ96GY0 325 aa11.37□□□□□ -0.59
HERPUD1-219ENST00000570273 FAM19A4Q96LR4 140 aa11.37□□□□□ -0.59
HERPUD1-219ENST00000570273 MLST8Q9BVC4 326 aa11.37□□□□□ -0.59
HERPUD1-219ENST00000570273 K7EN84 100 aa11.36□□□□□ -0.59
HERPUD1-219ENST00000570273 M0R036 132 aa11.36□□□□□ -0.59
HERPUD1-219ENST00000570273 M0R2Z0 102 aa11.36□□□□□ -0.59
HERPUD1-219ENST00000570273 CRISP2P16562 243 aa11.36□□□□□ -0.59
HERPUD1-219ENST00000570273 FXYD7P58549 80 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms