RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 FAM222AQ5U5X8 452 aa7.04□□□□□ -1.28
CLN6-209ENST00000569336 GFI1BQ5VTD9 330 aa7.04□□□□□ -1.28
CLN6-209ENST00000569336 RPL7L1Q6DKI1 246 aaKnown RBP7.04□□□□□ -1.28
CLN6-209ENST00000569336 ZNF493Q6ZR52 646 aa7.04□□□□□ -1.28
CLN6-209ENST00000569336 CMTM2Q8TAZ6 248 aa7.04□□□□□ -1.28
CLN6-209ENST00000569336 TMEM263Q8WUH6 116 aaKnown RBP7.04□□□□□ -1.28
CLN6-209ENST00000569336 LINC00476Q8WZB0 136 aa7.04□□□□□ -1.28
CLN6-209ENST00000569336 ZNF503Q96F45 646 aa7.04□□□□□ -1.28
CLN6-209ENST00000569336 OTORQ9NRC9 128 aa7.04□□□□□ -1.28
CLN6-209ENST00000569336 DKK2Q9UBU2 259 aa7.04□□□□□ -1.28
CLN6-209ENST00000569336 IGKV2-40A0A087WW87 121 aaPredicted RBP7.03□□□□□ -1.28
CLN6-209ENST00000569336 DEFB131BA0A096LNP1 70 aa7.03□□□□□ -1.28
CLN6-209ENST00000569336 TRBV7-9A0A0J9YWB2 115 aa7.03□□□□□ -1.28
CLN6-209ENST00000569336 C7orf71A4D174 169 aa7.03□□□□□ -1.28
CLN6-209ENST00000569336 HMSDA8MTL9 139 aa7.03□□□□□ -1.28
CLN6-209ENST00000569336 ZNF705GA8MUZ8 300 aaPredicted RBP7.03□□□□□ -1.28
CLN6-209ENST00000569336 CXorf1O96002 111 aa7.03□□□□□ -1.28
CLN6-209ENST00000569336 IGKV2D-40P01614 121 aaPredicted RBP7.03□□□□□ -1.28
CLN6-209ENST00000569336 STAG3L2P0CL84 134 aa7.03□□□□□ -1.28
CLN6-209ENST00000569336 STAG3L3P0CL85 134 aa7.03□□□□□ -1.28
CLN6-209ENST00000569336 CT45A10P0DMU9 189 aa7.03□□□□□ -1.28
CLN6-209ENST00000569336 CCDC28AQ8IWP9 274 aa7.03□□□□□ -1.28
CLN6-209ENST00000569336 ARL6IP6Q8N6S5 226 aa7.03□□□□□ -1.28
CLN6-209ENST00000569336 RAB24Q969Q5 203 aa7.03□□□□□ -1.28
CLN6-209ENST00000569336 PYGO2Q9BRQ0 406 aa7.03□□□□□ -1.28
CLN6-209ENST00000569336 ACTR3CQ9C0K3 210 aaPredicted RBP7.03□□□□□ -1.28
CLN6-209ENST00000569336 SH3BGRL3Q9H299 93 aa7.03□□□□□ -1.28
CLN6-209ENST00000569336 TMEM167BQ9NRX6 74 aa7.03□□□□□ -1.28
CLN6-209ENST00000569336 TRAV12-3A0A0B4J271 114 aa7.02□□□□□ -1.29
CLN6-209ENST00000569336 KLLNB2CW77 178 aa7.02□□□□□ -1.29
CLN6-209ENST00000569336 IGLL5B9A064 214 aa7.02□□□□□ -1.29
CLN6-209ENST00000569336 J3KRW8 73 aa7.02□□□□□ -1.29
CLN6-209ENST00000569336 GPX1P07203 203 aa7.02□□□□□ -1.29
CLN6-209ENST00000569336 PRB4P10163 310 aaPredicted RBP7.02□□□□□ -1.29
CLN6-209ENST00000569336 HTN1P15515 57 aa7.02□□□□□ -1.29
CLN6-209ENST00000569336 CRISP2P16562 243 aa7.02□□□□□ -1.29
CLN6-209ENST00000569336 ZNF138P52744 262 aa7.02□□□□□ -1.29
CLN6-209ENST00000569336 DAD1P61803 113 aa7.02□□□□□ -1.29
CLN6-209ENST00000569336 C12orf74Q32Q52 190 aa7.02□□□□□ -1.29
CLN6-209ENST00000569336 AKR1C8PQ5T2L2 129 aa7.02□□□□□ -1.29
CLN6-209ENST00000569336 TMED6Q8WW62 240 aa7.02□□□□□ -1.29
CLN6-209ENST00000569336 ARPC5LQ9BPX5 153 aa7.02□□□□□ -1.29
CLN6-209ENST00000569336 LENEPQ9Y5L5 61 aa7.02□□□□□ -1.29
CLN6-209ENST00000569336 DNAH6Q9C0G6 4158 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 IGHV4-4A0A075B6R2 117 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 A0A0D9SG52 128 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 CTXND1A0A1B0GTU2 59 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 SERTM2A0A1B0GWG4 89 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 KANTRA0A1W2PQU2 76 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 SNURFLB1AK76 121 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 DIRC3C9JPN6 131 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 SMLR1H3BR10 107 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 K7EQM0 130 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 HMGB3O15347 200 aaKnown RBP7.01□□□□□ -1.29
CLN6-209ENST00000569336 LY6G6CO95867 125 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 GCHFRP30047 84 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 EIF5AP63241 154 aaKnown RBP7.01□□□□□ -1.29
CLN6-209ENST00000569336 ERCC8Q13216 396 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 ZNF767PQ75MW2 155 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 KCNRGQ8N5I3 272 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 ZNF680Q8NEM1 530 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 RNASE8Q8TDE3 154 aaKnown RBP7.01□□□□□ -1.29
CLN6-209ENST00000569336 FAM210BQ96KR6 192 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 FAM19A4Q96LR4 140 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 HYLS1Q96M11 299 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 VGLL1Q99990 258 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 NDUFAF3Q9BU61 184 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 AGPAT4-IT1Q9H0P7 198 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 ZNF492Q9P255 531 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 TIMM8BQ9Y5J9 83 aaPredicted RBP7.01□□□□□ -1.29
CLN6-209ENST00000569336 PCLOQ9Y6V0 5065 aa7.01□□□□□ -1.29
CLN6-209ENST00000569336 VPS13DQ5THJ4 4388 aa7□□□□□ -1.29
CLN6-209ENST00000569336 PGPA6NDG6 321 aa7□□□□□ -1.29
CLN6-209ENST00000569336 BCL2L11O43521 198 aa7□□□□□ -1.29
CLN6-209ENST00000569336 PFDN1O60925 122 aa7□□□□□ -1.29
CLN6-209ENST00000569336 BTN1A1Q13410 526 aa7□□□□□ -1.29
CLN6-209ENST00000569336 KIR3DS1Q14943 382 aa7□□□□□ -1.29
CLN6-209ENST00000569336 LGALS9CQ6DKI2 356 aa7□□□□□ -1.29
CLN6-209ENST00000569336 IQCF2Q8IXL9 164 aa7□□□□□ -1.29
CLN6-209ENST00000569336 C5orf17Q8NAS9 161 aa7□□□□□ -1.29
CLN6-209ENST00000569336 Q8TAT8 98 aa7□□□□□ -1.29
CLN6-209ENST00000569336 ST6GAL2Q96JF0 529 aa7□□□□□ -1.29
CLN6-209ENST00000569336 RPH3ALQ9UNE2 315 aa7□□□□□ -1.29
CLN6-209ENST00000569336 KMT2AQ03164 3969 aa7□□□□□ -1.29
CLN6-209ENST00000569336 PLAC8L1A1L4L8 177 aa6.99□□□□□ -1.29
CLN6-209ENST00000569336 RGS13O14921 159 aa6.99□□□□□ -1.29
CLN6-209ENST00000569336 EIF3GO75821 320 aaKnown RBP eCLIP6.99□□□□□ -1.29
CLN6-209ENST00000569336 HTN3P15516 51 aa6.99□□□□□ -1.29
CLN6-209ENST00000569336 AZU1P20160 251 aa6.99□□□□□ -1.29
CLN6-209ENST00000569336 RNASE4P34096 147 aaKnown RBP6.99□□□□□ -1.29
CLN6-209ENST00000569336 GOLT1AQ6ZVE7 132 aa6.99□□□□□ -1.29
CLN6-209ENST00000569336 EIF4E3Q8N5X7 224 aaKnown RBP6.99□□□□□ -1.29
CLN6-209ENST00000569336 SUN5Q8TC36 379 aa6.99□□□□□ -1.29
CLN6-209ENST00000569336 LINC00467Q9BRT7 94 aa6.99□□□□□ -1.29
CLN6-209ENST00000569336 NDFIP1Q9BT67 221 aa6.99□□□□□ -1.29
CLN6-209ENST00000569336 A0A1W2PRE2 83 aa6.98□□□□□ -1.29
CLN6-209ENST00000569336 MAP1LC3B2A6NCE7 125 aa6.98□□□□□ -1.29
CLN6-209ENST00000569336 FBLL1A6NHQ2 334 aaKnown RBP6.98□□□□□ -1.29
CLN6-209ENST00000569336 CBY3A6NI87 242 aa6.98□□□□□ -1.29
CLN6-209ENST00000569336 UMAD1C9J7I0 102 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms