RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 HIST1H2BAQ96A08 127 aa7.73□□□□□ -1.17
CDH3-210ENST00000569117 C11orf52Q96A22 123 aa7.73□□□□□ -1.17
CDH3-210ENST00000569117 ATG101Q9BSB4 218 aa7.73□□□□□ -1.17
CDH3-210ENST00000569117 WFDC10AQ9H1F0 79 aa7.73□□□□□ -1.17
CDH3-210ENST00000569117 MED9Q9NWA0 146 aa7.73□□□□□ -1.17
CDH3-210ENST00000569117 EPDR1Q9UM22 224 aa7.73□□□□□ -1.17
CDH3-210ENST00000569117 HLA-DRB4X5D2U9 266 aa7.73□□□□□ -1.17
CDH3-210ENST00000569117 RBAKDNA6NC62 111 aa7.72□□□□□ -1.17
CDH3-210ENST00000569117 A8MTW9 85 aa7.72□□□□□ -1.17
CDH3-210ENST00000569117 B5MCH6 92 aa7.72□□□□□ -1.17
CDH3-210ENST00000569117 NPIPB6E9PJ23 425 aa7.72□□□□□ -1.17
CDH3-210ENST00000569117 F6UB75 175 aa7.72□□□□□ -1.17
CDH3-210ENST00000569117 PEX7O00628 323 aa7.72□□□□□ -1.17
CDH3-210ENST00000569117 PDE6DO43924 150 aa7.72□□□□□ -1.17
CDH3-210ENST00000569117 DEFB1P60022 68 aa7.72□□□□□ -1.17
CDH3-210ENST00000569117 GNG5P63218 68 aa7.72□□□□□ -1.17
CDH3-210ENST00000569117 ZNF124Q15973 351 aa7.72□□□□□ -1.17
CDH3-210ENST00000569117 GDF5OSQ5U4N7 250 aa7.72□□□□□ -1.17
CDH3-210ENST00000569117 EBLN2Q6P2I7 272 aa7.72□□□□□ -1.17
CDH3-210ENST00000569117 CYB561D1Q8N8Q1 229 aa7.72□□□□□ -1.17
CDH3-210ENST00000569117 RPH3ALQ9UNE2 315 aa7.72□□□□□ -1.17
CDH3-210ENST00000569117 IGKV2-40A0A087WW87 121 aaPredicted RBP7.71□□□□□ -1.18
CDH3-210ENST00000569117 SCO2A0A1W2PP80 73 aa7.71□□□□□ -1.18
CDH3-210ENST00000569117 F6UZH7 168 aa7.71□□□□□ -1.18
CDH3-210ENST00000569117 K7EQM0 130 aa7.71□□□□□ -1.18
CDH3-210ENST00000569117 IGKV2D-40P01614 121 aaPredicted RBP7.71□□□□□ -1.18
CDH3-210ENST00000569117 CNN1P51911 297 aaKnown RBP7.71□□□□□ -1.18
CDH3-210ENST00000569117 ACTL10Q5JWF8 245 aa7.71□□□□□ -1.18
CDH3-210ENST00000569117 C9orf47Q6ZRZ4 202 aa7.71□□□□□ -1.18
CDH3-210ENST00000569117 GOLT1AQ6ZVE7 132 aa7.71□□□□□ -1.18
CDH3-210ENST00000569117 TMEM75Q8N9X5 138 aa7.71□□□□□ -1.18
CDH3-210ENST00000569117 OR10J6PQ8NGY7 276 aa7.71□□□□□ -1.18
CDH3-210ENST00000569117 C2CD4CQ8TF44 421 aa7.71□□□□□ -1.18
CDH3-210ENST00000569117 RARRES2Q99969 163 aa7.71□□□□□ -1.18
CDH3-210ENST00000569117 SPATA25Q9BR10 227 aa7.71□□□□□ -1.18
CDH3-210ENST00000569117 EIF5A2Q9GZV4 153 aaKnown RBP7.71□□□□□ -1.18
CDH3-210ENST00000569117 AGRNO00468 2067 aa7.71□□□□□ -1.18
CDH3-210ENST00000569117 RAB19A4D1S5 217 aa7.7□□□□□ -1.18
CDH3-210ENST00000569117 LINC00862A6NCI5 91 aa7.7□□□□□ -1.18
CDH3-210ENST00000569117 PGPEP1LA6NFU8 196 aa7.7□□□□□ -1.18
CDH3-210ENST00000569117 FBLL1A6NHQ2 334 aaKnown RBP7.7□□□□□ -1.18
CDH3-210ENST00000569117 KNCNA6PVL3 124 aa7.7□□□□□ -1.18
CDH3-210ENST00000569117 TMEM250H0YL14 139 aa7.7□□□□□ -1.18
CDH3-210ENST00000569117 H3BMM0 161 aa7.7□□□□□ -1.18
CDH3-210ENST00000569117 DUSP14O95147 198 aaKnown RBP7.7□□□□□ -1.18
CDH3-210ENST00000569117 PLA2G1BP04054 148 aaKnown RBP7.7□□□□□ -1.18
CDH3-210ENST00000569117 HIST1H1AQ02539 215 aaPredicted RBP7.7□□□□□ -1.18
CDH3-210ENST00000569117 TRPT1Q86TN4 253 aaKnown RBP7.7□□□□□ -1.18
CDH3-210ENST00000569117 DEFB125Q8N687 156 aa7.7□□□□□ -1.18
CDH3-210ENST00000569117 ODF3Q96PU9 254 aa7.7□□□□□ -1.18
CDH3-210ENST00000569117 SMDT1Q9H4I9 107 aa7.7□□□□□ -1.18
CDH3-210ENST00000569117 SRD5A3Q9H8P0 318 aa7.7□□□□□ -1.18
CDH3-210ENST00000569117 AURKAIP1Q9NWT8 199 aaPredicted RBP7.7□□□□□ -1.18
CDH3-210ENST00000569117 A8MZ25 164 aa7.69□□□□□ -1.18
CDH3-210ENST00000569117 IGLV2-11P01706 119 aa7.69□□□□□ -1.18
CDH3-210ENST00000569117 ZNF705DP0CH99 300 aaPredicted RBP7.69□□□□□ -1.18
CDH3-210ENST00000569117 ZNF705BP0CI00 300 aaPredicted RBP7.69□□□□□ -1.18
CDH3-210ENST00000569117 PRB4P10163 310 aaPredicted RBP7.69□□□□□ -1.18
CDH3-210ENST00000569117 AKR1C3P42330 323 aa7.69□□□□□ -1.18
CDH3-210ENST00000569117 PEA15Q15121 130 aa7.69□□□□□ -1.18
CDH3-210ENST00000569117 TMEM78Q5T7P6 136 aa7.69□□□□□ -1.18
CDH3-210ENST00000569117 AMTNQ6UX39 209 aa7.69□□□□□ -1.18
CDH3-210ENST00000569117 Q86TA4 180 aa7.69□□□□□ -1.18
CDH3-210ENST00000569117 STHQ8IWL8 128 aa7.69□□□□□ -1.18
CDH3-210ENST00000569117 FMC1Q96HJ9 113 aa7.69□□□□□ -1.18
CDH3-210ENST00000569117 VGLL1Q99990 258 aa7.69□□□□□ -1.18
CDH3-210ENST00000569117 PPP1R14DQ9NXH3 145 aa7.69□□□□□ -1.18
CDH3-210ENST00000569117 KLF12Q9Y4X4 402 aa7.69□□□□□ -1.18
CDH3-210ENST00000569117 TRAV8-1A0A0A6YYK1 113 aa7.68□□□□□ -1.18
CDH3-210ENST00000569117 TRBV7-9A0A0J9YWB2 115 aa7.68□□□□□ -1.18
CDH3-210ENST00000569117 TRBV6-1A0A0K0K1D8 114 aa7.68□□□□□ -1.18
CDH3-210ENST00000569117 RBMY1BA6NDE4 496 aaKnown RBP7.68□□□□□ -1.18
CDH3-210ENST00000569117 RBMY1EA6NEQ0 496 aaKnown RBP7.68□□□□□ -1.18
CDH3-210ENST00000569117 RBMY1DP0C7P1 496 aaKnown RBP7.68□□□□□ -1.18
CDH3-210ENST00000569117 IGHV4-30-4P0DP06 118 aa7.68□□□□□ -1.18
CDH3-210ENST00000569117 ZNF138P52744 262 aa7.68□□□□□ -1.18
CDH3-210ENST00000569117 ERCC8Q13216 396 aa7.68□□□□□ -1.18
CDH3-210ENST00000569117 COMMD7Q86VX2 200 aa7.68□□□□□ -1.18
CDH3-210ENST00000569117 EIF4E3Q8N5X7 224 aaKnown RBP7.68□□□□□ -1.18
CDH3-210ENST00000569117 OR4B1Q8NGF8 309 aa7.68□□□□□ -1.18
CDH3-210ENST00000569117 Q8TAT8 98 aa7.68□□□□□ -1.18
CDH3-210ENST00000569117 LINC00477Q96M19 166 aa7.68□□□□□ -1.18
CDH3-210ENST00000569117 DERL1Q9BUN8 251 aa7.68□□□□□ -1.18
CDH3-210ENST00000569117 AGPAT4-IT1Q9H0P7 198 aa7.68□□□□□ -1.18
CDH3-210ENST00000569117 ZNF492Q9P255 531 aa7.68□□□□□ -1.18
CDH3-210ENST00000569117 LENEPQ9Y5L5 61 aa7.68□□□□□ -1.18
CDH3-210ENST00000569117 C9JQL5 133 aa7.67□□□□□ -1.18
CDH3-210ENST00000569117 K7EIL1 84 aa7.67□□□□□ -1.18
CDH3-210ENST00000569117 IGKV3-20P01619 116 aa7.67□□□□□ -1.18
CDH3-210ENST00000569117 S100A9P06702 114 aaKnown RBP7.67□□□□□ -1.18
CDH3-210ENST00000569117 SRP19P09132 144 aaKnown RBP7.67□□□□□ -1.18
CDH3-210ENST00000569117 CT45A10P0DMU9 189 aa7.67□□□□□ -1.18
CDH3-210ENST00000569117 RPL35P42766 123 aaKnown RBP7.67□□□□□ -1.18
CDH3-210ENST00000569117 UBE2G1P62253 170 aa7.67□□□□□ -1.18
CDH3-210ENST00000569117 FLI1Q01543 452 aaPredicted RBP7.67□□□□□ -1.18
CDH3-210ENST00000569117 TMEM183BQ1AE95 376 aa7.67□□□□□ -1.18
CDH3-210ENST00000569117 UQCC3Q6UW78 93 aa7.67□□□□□ -1.18
CDH3-210ENST00000569117 FAM19A4Q96LR4 140 aa7.67□□□□□ -1.18
CDH3-210ENST00000569117 LINC00479Q96M42 142 aa7.67□□□□□ -1.18
CDH3-210ENST00000569117 PARLQ9H300 379 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms